Label-free electronic detection of peptide post-translational modification with functional enzyme-driven assay at the physical limit
Source abstract
Abstract
High-performance, ultra-sensitive, and universal protein post-translational modification (PTM) and protein-protein interaction (PPI) technologies are eagerly pursued in the pharmaceutical industry and bioanalytical research. Novel PTM and PPI detection methods outperform traditional assays in scope and scalability, enabling the collection of information on multiple biochemical targets. Detecting peptides and proteins at the single-molecule level is done by utilizing nanosized transducing elements and assaying solutions at very high analyte concentrations, in the nanomolar range or higher. Here, a proof of principle of a biosensing platform for single-molecule PTM detection is demonstrated. This platform is based on the single molecule with a large transistor (SiMoT) technology, encompassing a millimeter-sized electrolyte-gated organic field-effect transistor, for label-free PTM detection with a zeptomolar limit of detection. Sensitivity is improved 10 6 - to 10 12 -fold compared with mass-spectrometry and luminescence-based assay methods. A functional assay for detecting enzyme-driven peptide PTMs in the zeptomolar concentration range is demonstrated using multivariate data processing, opening the way for future applications to monitor PTMs.
Source: openalex_inverted_index · Quality: baseline
Research context
OpenAlex topics: Advanced biosensing and bioanalysis techniques · Analytical Chemistry and Sensors · Electrochemical sensors and biosensors
SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.
References (42)
Show source-provided references
1. Proteome-wide post-translational modification statistics: frequency analysis and curation of the swiss-prot database10.1038/srep00090 ↗
2. Post-Translational Modifications of G Protein–Coupled Receptors Control Cellular Signaling Dynamics in Space and Time10.1124/pharmrev.120.000082 ↗
3. Proteomic analysis of post-translational modifications10.1038/nbt0303-255 ↗
4. Multiple Reaction Monitoring of mTRAQ-Labeled Peptides Enables Absolute Quantification of Endogenous Levels of a Potential Cancer Marker in Cancerous and Normal Endometrial Tissues10.1021/pr800312m ↗
5. Superiority of Brain Natriuretic Peptide as a Hormonal Marker of Ventricular Systolic and Diastolic Dysfunction and Ventricular Hypertrophy10.1161/01.HYP.28.6.988 ↗
6. Pro-Gastrin-Releasing Peptide(31-98) Is a Specific Tumor Marker in Patients with Small Cell Lung Carcinoma
7. N-Terminal Pro-Brain Natriuretic Peptide After Myocardial Infarction10.1161/hy0102.100537 ↗
8. Mass spectrometry-based proteomics: existing capabilities and future directions10.1039/c2cs15331a ↗
9. Large-Area Interfaces for Single-Molecule Label-free Bioelectronic Detection10.1021/acs.chemrev.1c00290 ↗
10. Detection of post-translational modifications in single peptides using electron tunnelling currents10.1038/nnano.2014.193 ↗
11. Single-molecule spectroscopy of amino acids and peptides by recognition tunnelling10.1038/nnano.2014.54 ↗
12. Label-Free Detection of Post-translational Modifications with a Nanopore10.1021/acs.nanolett.9b03134 ↗
13. Single-molecule site-specific detection of protein phosphorylation with a nanopore10.1038/nbt.2799 ↗
14. Real-Time Monitoring of Phosphorylation Kinetics with Self-Assembled Nano-oscillators10.1002/anie.201411040 ↗
15. Single-molecule detection with a millimetre-sized transistor10.1038/s41467-018-05235-z ↗
16. Label-Free and Selective Single-Molecule Bioelectronic Sensing with a Millimeter-Wide Self-Assembled Monolayer of Anti-Immunoglobulins10.1021/acs.chemmater.8b04414 ↗
17. Assessment of Gold Bio-Functionalization for Wide-Interface Biosensing Platforms10.3390/s20133678 ↗
18. Organic Field-Effect Transistor Platform for Label-Free, Single-Molecule Detection of Genomic Biomarkers10.1021/acssensors.0c00694 ↗
19. Ultra-low HIV-1 p24 detection limits with a bioelectronic sensor10.1007/s00216-019-02319-7 ↗
20. The leucine zipper: a hypothetical structure common to a new class of DNA binding proteins10.1126/science.3289117 ↗
21. Thermal Dissociation Assay for Time-Resolved Fluorescence Detection of Protein Post-Translational Modifications10.1021/acsomega.9b02134 ↗
22. Toward universal protein post-translational modification detection in high throughput format10.1039/C7CC09575A ↗
23. Peptic Fluorescent “Signal-On” and “Signal-Off” Sensors Utilized for the Detection Protein Post-Translational Modifications10.1021/acsomega.8b03672 ↗
24. Controlling the Binding Efficiency of Surface Confined Antibodies through the Design of Mixed Self-Assembled Monolayers10.1002/admi.202300017 ↗
25. Structural origins of high-affinity biotin binding to streptavidin10.1126/science.2911722 ↗
26. On the Distribution of Protein Refractive Index Increments10.1016/j.bpj.2011.03.004 ↗
27. Recent advancements in surface plasmon resonance immunosensors for detection of small molecules of biomedical, food and environmental interest10.1016/j.snb.2006.09.014 ↗
28. AFM fishing nanotechnology is the way to reverse the Avogadro number in proteomics10.1002/pmic.200600467 ↗
29. Europium Nanoparticles and Time-resolved Fluorescence for Ultrasensitive Detection of Prostate-specific Antigen10.1093/clinchem/47.3.561 ↗
30. Supersensitive Time-resolved Immunofluorometric Assay of Free Prostate-specific Antigen with Nanoparticle Label Technology10.1093/clinchem/47.7.1269 ↗
31. Quenching resonance energy transfer (QRET): a single-label technique for inhibitor screening and interaction studies10.1016/j.nbt.2015.02.007 ↗
32. Homogeneous peptide-break assay for luminescent detection of enzymatic protein post-translational modification activity utilizing charged peptides10.1016/j.aca.2018.12.041 ↗
33. About the amplification factors in organic bioelectronic sensors10.1039/C9MH01544B ↗
34. Organic bioelectronics probing conformational changes in surface confined proteins10.1038/srep28085 ↗
35. Fast and Reliable Electronic Assay of a Xylella fastidiosa Single Bacterium in Infected Plants Sap10.1002/advs.202203900 ↗
36. Why a Diffusing Single-Molecule can be Detected in Few Minutes by a Large Capturing Bioelectronic Interface10.1002/advs.202104381 ↗
37. Beyond the Debye length in high ionic strength solution: Direct protein detection with field-effect transistors (FETs) in human serum10.1038/s41598-017-05426-6 ↗
38. Electrolyte-Gated Transistors for Organic and Printed Electronics10.1002/adma.201202790 ↗
39. Ultrasensitive flexible graphene based field-effect transistor (FET)-type bioelectronic nose10.1021/nl301714x ↗
40. Extended Work Function Shift of Large-Area Biofunctionalized Surfaces Triggered by a Few Single-Molecule Affinity Binding Events10.1002/admi.202201829 ↗
41. Principal Component Analysis (PCA)
42. Printed, cost-effective and stable poly(3-hexylthiophene) electrolyte-gated field-effect transistors10.1039/D0TC03342A ↗