journal article·2025-12Open access

Integrating Single‐Cell Transcriptome‐Wide Mendelian Randomization and Differentially Expressed Gene Analyses to Prioritize Dynamic Immune‐Related Drug Targets for Cancers (Adv. Sci. 46/2025)

Jie Zheng, Qian Yang, Haoyu Liu, Huiling Zhao, Shuangyuan Wang, Yi Liu, Xueyan Wu, Yilan Ding, Hui Ying, Youqiu Ye, Xi Huang, Lei Ye, Ruizhi Zheng, Hong Lin, Mian Li, Tiange Wang, Zhiyun Zhao, Min Xu, Yi Duan, Hao Guo, Zhongshang Yuan, Philip Haycock, George Davey Smith, Richard M Martin, Guang Ning, Fang Hu, Weiqing Wang, Tom R. Gaunt, Jieli Lu, Yufang Bi

Advanced Science· Volume 12· Issue 46

Abstract

Integrating Popular Human Genomics Tools for Cancer Drug Target Screening Differential expressed gene (DEG) analysis and Mendelian randomization (MR) are two widely-used human genomics tools to identify associations between genes and diseases, but have not been integrated together to strengthen causal inference in population-based studies. In their Research Article (DOI: 10.1002/advs.202507451), Jie Zheng, Qian Yang, Haoyu Liu, and co-workers propose a new concept “MR-DEG pleitropy exclusion”, which uses DEG evidence to filter out the putative causal effects of genes on diseases. By applying the concept to immune-cell RNA-seq data among cancer patients and healthy controls, 33 genes are prioritized as potential drug targets for cancers.
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Research context

OpenAlex topics: Single-cell and spatial transcriptomics · Cancer Immunotherapy and Biomarkers · Ferroptosis and cancer prognosis

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