journal article·2025-04Open access

Comment on: “Atom‐Modified gDNA Enhances Cleavage Activity of TtAgo Enabling Ultrasensitive Nucleic Acid Testing”

Yue Tang, Xiao‐han Wang, Xu Xu, Lu‐sheng Xin, Xiu‐dan Wang, Xin‐min Li

Advanced Science· Volume 12· Issue 13

Abstract

Abstract The recent article by Zhang et al. piqued the interest. An atom‐modification‐based strategy is reported to enhance the cleavage activity of TtAgo, improving its practicability in TtAgo‐based nucleic acid testing. Specifically, the 2′‐fluorine (2′F)‐modified guide DNA (2′F‐gDNA) shows significant enhancement in the cleavage activity of TtAgo on double‐stranded (dsDNA) by increasing the melting temperature (Tm) and strengthening the binding affinity between 2′F‐gDNA and the targeted dsDNA. These findings are considered important for both molecular diagnostics and gene editing. A careful review of the article, however, raises questions that merit further discussion. After comprehensively reviewing the cleavage mechanism and structure of TtAgo‐gDNA‐target ternary complexes, and thoroughly analyzing our results, it is believed that the increased Tm and binding affinity of 2′F‐gDNA are not the primary factors that enhance cleavage activity, it is speculated that the 2′F modification at gDNA 3′‐end likely influences the propagation step. The data suggest that several details need to be addressed to improve the robustness of 2′F‐gDNA/TtAgo cleavage.
Source: crossref · Quality: baseline

Research context

OpenAlex topics: CRISPR and Genetic Engineering · Advanced biosensing and bioanalysis techniques · RNA Interference and Gene Delivery

SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.

Affiliations

Institute of chronic diseases,Institute for Translational Medicine The Affiliated Hospital of Qingdao University School of Basic Medicine,College of Medicine Qingdao University Qingdao 266073 China

State Key Laboratory of Marine Food Processing & Safety Control College of Food Science and Engineering Ocean University of China Qingdao 266404 China

Jining Medical University Jining 272067 China

Funding

National Key Research and Development Program of China

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