Comment on: “Atom‐Modified gDNA Enhances Cleavage Activity of TtAgo Enabling Ultrasensitive Nucleic Acid Testing”
Source abstract
Abstract
Abstract The recent article by Zhang et al. piqued the interest. An atom‐modification‐based strategy is reported to enhance the cleavage activity of TtAgo, improving its practicability in TtAgo‐based nucleic acid testing. Specifically, the 2′‐fluorine (2′F)‐modified guide DNA (2′F‐gDNA) shows significant enhancement in the cleavage activity of TtAgo on double‐stranded (dsDNA) by increasing the melting temperature (Tm) and strengthening the binding affinity between 2′F‐gDNA and the targeted dsDNA. These findings are considered important for both molecular diagnostics and gene editing. A careful review of the article, however, raises questions that merit further discussion. After comprehensively reviewing the cleavage mechanism and structure of TtAgo‐gDNA‐target ternary complexes, and thoroughly analyzing our results, it is believed that the increased Tm and binding affinity of 2′F‐gDNA are not the primary factors that enhance cleavage activity, it is speculated that the 2′F modification at gDNA 3′‐end likely influences the propagation step. The data suggest that several details need to be addressed to improve the robustness of 2′F‐gDNA/TtAgo cleavage.
Source: crossref · Quality: baseline
Research context
OpenAlex topics: CRISPR and Genetic Engineering · Advanced biosensing and bioanalysis techniques · RNA Interference and Gene Delivery
SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.
Affiliations
Institute of chronic diseases,Institute for Translational Medicine The Affiliated Hospital of Qingdao University School of Basic Medicine,College of Medicine Qingdao University Qingdao 266073 China
State Key Laboratory of Marine Food Processing & Safety Control College of Food Science and Engineering Ocean University of China Qingdao 266404 China
Jining Medical University Jining 272067 China
Funding
National Key Research and Development Program of China
References (17)
Show source-provided references
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