journal article·2022-12Open access

From Unit to Dose: A Machine Learning Approach for Precise Prediction of Hemoglobin and Iron Content in Individual Packed Red Blood Cell Units

Jeremy Epah, Ilay Gülec, Stefan Winter, Johanna Dörr, Christof Geisen, Eva Haecker, Dietmar Link, Matthias Schwab, Erhard Seifried, Richard Schäfer

Advanced Science· Volume 9· Issue 36

Abstract

Abstract Transfusion of packed red blood cells (pRBCs) saves lives, but iron overload limits survival of chronically transfused patients. Quality control methods, which involve entering pRBC units and removing them from the blood supply, reveal that hemoglobin (38.5–79.9 g) and heme iron (133.42–276.89 mg) vary substantially between pRBCs. Yet, neither hemoglobin nor iron content can be quantified for individual clinically used pRBCs leading to rules of thumb for pRBC transfusions. Keeping their integrity, the authors seek to predict hemoglobin/iron content of any given pRBC unit applying eight machine learning models on 6,058 pRBCs. Based on thirteen features routinely collected during blood donation, production and quality control testing, the model with best trade‐off between performance and complexity in hemoglobin/iron content prediction is identified. Validation of this model in an independent cohort of 2637 pRBCs confirms an adjusted R2 > 0.9 corresponding to a mean absolute prediction error of ≤1.43 g hemoglobin/4.96 mg iron (associated standard deviation: ≤1.13 g hemoglobin/3.92 mg iron). Such unprecedented precise prediction enables reliable pRBC dosing per pharmaceutically active agent, and monitoring iron uptake in patients and individual iron loss in donors. The model is implemented in a free open source web application to facilitate clinical application.
Source: crossref · Quality: baseline

Research context

OpenAlex topics: Hemoglobinopathies and Related Disorders · Blood groups and transfusion · Blood donation and transfusion practices

SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.

Affiliations

Institute for Transfusion Medicine and Immunohaematology, German Red Cross Blood Donor Service Baden‐Württemberg‐Hessen gGmbH Goethe University Hospital 60528 Frankfurt am Main Germany

Dr. Margarete Fischer‐Bosch Institute of Clinical Pharmacology Stuttgart, Germany University of Tübingen 72076 Tübingen Germany

Departments of Clinical Pharmacology Pharmacy and Biochemistry University of Tübingen 72076 Tübingen Germany

Cluster of Excellence iFIT (EXC 2180), Image‐Guided and Functionally Instructed Tumor Therapies“ University of Tübingen 72076 Tübingen Germany

Institute for Transfusion Medicine and Gene Therapy Medical Center – University of Freiburg 79106 Freiburg Germany

Center for Chronic Immunodeficiency (CCI) Medical Center – University of Freiburg 79106 Freiburg Germany

Funding

Robert Bosch Stiftung · Deutsche Forschungsgemeinschaft

References (73)

Show source-provided references
1. WHO HQ/Geneva World Health Organization (WHO) Global Forum for Blood Safety: Patient Blood Management (2011) https://www.who.int/bloodsafety/events/gfbs_01_pbm_concept_paper.pdf(accessed: October 2021).
2. 10.1111/trf.1373810.1111/trf.13738 ↗
3. Müller M. M. · Dtsch Arztebl Int · 2015 · 112 · 507
4. 10.1111/j.1423-0410.2009.01207.x10.1111/j.1423-0410.2009.01207.x ↗
5. 10.1016/j.leukres.2012.04.00610.1016/j.leukres.2012.04.006 ↗
6. Remacha A. · Blood Transfus. · 2013 · 11 · 128
7. 10.1179/1607845413Y.000000012110.1179/1607845413Y.0000000121 ↗
8. 10.1016/S0140-6736(89)90264-X10.1016/S0140-6736(89)90264-X ↗
9. Cappellini M.‐D. · 2014
10. Agnihotri N. · Blood Transfus. · 2014 · 12 · 520
11. W.Lau Chapter 13 – Neonatal and Pediatric Transfusion (2017) https://professionaleducation.blood.ca/en/neonatal‐and‐pediatric‐transfusion(accessed: October 2021).
12. 10.1111/j.1537-2995.2005.00192.x10.1111/j.1537-2995.2005.00192.x ↗
13. 10.1111/j.1537-2995.2009.02490.x10.1111/j.1537-2995.2009.02490.x ↗
14. 10.1159/00031394910.1159/000313949 ↗
15. 10.1111/j.1537-2995.2004.03225.x10.1111/j.1537-2995.2004.03225.x ↗
16. 10.1111/j.1537-2995.2010.02865.x10.1111/j.1537-2995.2010.02865.x ↗
17. 10.1016/j.transci.2004.02.00510.1016/j.transci.2004.02.005 ↗
18. 10.4274/tjh.2016.045010.4274/tjh.2016.0450 ↗
19. 10.1038/nature2105610.1038/nature21056 ↗
20. 10.1177/193229681562020010.1177/1932296815620200 ↗
21. T.Kluyver Jupyter Notebooks – a publishing format for reproducible computational workflows: Positioning and Power in Academic Publishing: Players Agents and Agendas https://ebooks.iospress.nl/publication/42900 (accessed: October 2021).
22. Rossum G. · 2010
23. 10.1007/978-1-4842-4470-8_710.1007/978-1-4842-4470-8_7 ↗
24. McKinney W. · 2010 · 56
25. 10.1038/s41586-020-2649-210.1038/s41586-020-2649-2 ↗
26. 10.1109/MCSE.2007.5510.1109/MCSE.2007.55 ↗
27. Pedregosa F. · J. Mach. Learn. Res. · 2011 · 12 · 2825
28. M.Waskom O.Botvinnik D.O'Kane P.Hobson S.Lukauskas D. C.Gemperline T.Augspurger Y.Halchenko J. B.Cole J.Warmenhoven J.deRuiter C.Pye S.Hoyer J.Vanderplas S.Villalba G.Kunter E.Quintero P.Bachant M.Martin K.Meyer A.Miles Y.Ram T.Yarkoni M. L.Williams C.Evans C.Fitzgerald B. C.Fonnesbeck A.Lee A.Qalieh Mwaskom/Seaborn: V0.8.1 (September 2017) Zenodo2017.
29. 10.1038/s41592-019-0686-210.1038/s41592-019-0686-2 ↗
30. jaketmp Lee Tirrell jaketmp/pyCompare Zenodo2021.
31. Abadi M.
32. SciKeras Developers SciKeras 0.4.1 documentation: Scikit‐Learn API wrapper for Keras (2020) https://www.adriangb.com/scikeras/stable/(accessed: October 2021).
33. 10.5120/ijca201791549510.5120/ijca2017915495 ↗
34. 10.1145/358669.35869210.1145/358669.358692 ↗
35. 10.1023/A:102262741141110.1023/A:1022627411411 ↗
36. 10.1023/A:101093340432410.1023/A:1010933404324 ↗
37. 10.2307/140379710.2307/1403797 ↗
38. 10.1023/A:102264320487710.1023/A:1022643204877 ↗
39. G.Ke LightGBM: A Highly Efficient Gradient Boosting Decision Tree (2017) https://dl.acm.org/doi/10.5555/3294996.3295074(accessed: October 2021).
40. 10.1007/BF0247825910.1007/BF02478259 ↗
41. Braunitzer G. · Bibl. Haematol. · 1964 · 18 · 59
42. 10.1093/clinchem/20.5.61510.1093/clinchem/20.5.615 ↗
43. 10.1136/bmj.b60610.1136/bmj.b606 ↗
44. 10.1016/S0140-6736(86)90837-810.1016/S0140-6736(86)90837-8 ↗
45. 10.1200/JCO.2010.34.122210.1200/JCO.2010.34.1222 ↗
46. 10.1111/j.1537-2995.2005.04323.x10.1111/j.1537-2995.2005.04323.x ↗
47. 10.1111/trf.1633810.1111/trf.16338 ↗
48. 10.1001/jama.2019.055410.1001/jama.2019.0554 ↗
49. 10.1182/blood.201900077310.1182/blood.2019000773 ↗
50. 10.1172/jci.insight.15259810.1172/jci.insight.152598 ↗
51. Volken T. · Blood Transfus. · 2018 · 16 · 73
52. 10.1111/bjh.1625610.1111/bjh.16256 ↗
53. 10.1172/JCI9083710.1172/JCI90837 ↗
54. 10.1046/j.1537-2995.2001.41030353.x10.1046/j.1537-2995.2001.41030353.x ↗
55. 10.1046/j.1537-2995.1997.37297203514.x10.1046/j.1537-2995.1997.37297203514.x ↗
56. Larsen R. · 2016 · 25810.1007/978-3-662-50444-4_17 ↗
57. 10.1101/cshperspect.a01167610.1101/cshperspect.a011676 ↗
58. 10.1038/ncomms1077610.1038/ncomms10776 ↗
59. 10.1038/185416a010.1038/185416a0 ↗
60. 10.1038/s41598-021-85387-z10.1038/s41598-021-85387-z ↗
61. 10.1038/s41746-019-0212-z10.1038/s41746-019-0212-z ↗
62. 10.1177/104345421983545110.1177/1043454219835451 ↗
63. 10.1111/bjh.1560010.1111/bjh.15600 ↗
64. 10.3390/ijns404003610.3390/ijns4040036 ↗
65. 10.2196/jmir.351010.2196/jmir.3510 ↗
66. 10.2196/jmir.675910.2196/jmir.6759 ↗
67. 10.1016/j.vaccine.2012.05.01110.1016/j.vaccine.2012.05.011 ↗
68. 10.1038/bmt.2010.210.1038/bmt.2010.2 ↗
69. 10.1093/ajcn/42.6.122110.1093/ajcn/42.6.1221 ↗
70. 10.1542/peds.107.6.138110.1542/peds.107.6.1381 ↗
71. 10.1016/j.sbspro.2011.11.43710.1016/j.sbspro.2011.11.437 ↗
72. 10.1111/voxs.1237710.1111/voxs.12377 ↗
73. 10.1111/trf.1513310.1111/trf.15133 ↗