journal article·2024-11Open access

Toward Analysis at the Point of Need: A Digital Microfluidic Approach to Processing Multi‐Source Sexual Assault Samples

Mohamed Elsayed, Leticia Bodo, Christine Gaoiran, Palig Keuhnelian, Advikaa Dosajh, Vivienne Luk, Melissa Schwandt, Julie L. French, Alpana Ghosh, Barbara Erickson, Amanda G. Charlesworth, Jonathan Millman, Aaron R. Wheeler

Advanced Science· Volume 11· Issue 41

Abstract

Abstract Forensic case samples collected in sexual assaults typically contain DNA from multiple sources, which complicates short‐tandem repeat (STR) profiling. These samples are typically sent to a laboratory to separate the DNA from sperm and non‐sperm sources prior to analysis. Here, the automation and miniaturization of these steps using digital microfluidics (DMF) is reported, which may eventually enable processing sexual assault samples outside of the laboratory, at the point of need. When applied to vaginal swab samples collected up to 12 h post‐coitus (PC), the new method identifies single‐source (male) STR profiles. When applied to samples collected 24–72 h PC, the method identifies mixed STR profiles, suggesting room for improvement and/or potential for data deconvolution. In sum, an automated, miniaturized sample pre‐processing method for separating the DNA contained in sexual assault samples is demonstrated. This type of automated processing using DMF, especially when combined with Rapid DNA Analysis, has the potential to be used for processing of sexual assault samples in hospitals, police offices, and other locations outside of the laboratory.
Source: crossref · Quality: baseline

Research context

OpenAlex topics: Electrowetting and Microfluidic Technologies · Microfluidic and Bio-sensing Technologies · Biosensors and Analytical Detection

SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.

Affiliations

Institute of Biomedical Engineering University of Toronto 164 College Street Toronto ON M5S 3E2 Canada

Donnelly Centre for Cellular and Biomolecular Research University of Toronto 160 College Street Toronto ON M5S 3E1 Canada

Department of Chemistry University of Toronto 80 St. George Street Toronto ON M5S 3H6 Canada

Forensic Science Department University of Toronto Mississauga 4th floor, Terrence Donnelly Health Sciences Complex, 3359 Mississauga Rd. Mississauga ON L5L 1C6 Canada

ANDE Corporation 1860 Industrial Circle, Suite A Longmont CO 80501 USA

Centre of Forensic Sciences 25 Morton Shulman Avenue Toronto ON M3M 0B1 Canada

References (69)

Show source-provided references
1. Johnson H. · 2012 · 613
2. O. V. A.Women Summary of the Proceedings: Eliminating the Rape Kit Backlog: A Roundtable to Explore a Victim‐Centered Approach Washington D.C. 2010.
3. 10.1111/1556-4029.1387710.1111/1556-4029.13877 ↗
4. 10.1177/088626051663958510.1177/0886260516639585 ↗
5. 10.1016/j.forsciint.2023.11188710.1016/j.forsciint.2023.111887 ↗
6. 10.1016/j.fsigen.2023.10292810.1016/j.fsigen.2023.102928 ↗
7. 10.1007/s00414-017-1567-910.1007/s00414-017-1567-9 ↗
8. 10.1016/j.fsigen.2019.02.01610.1016/j.fsigen.2019.02.016 ↗
9. 10.1111/1556-4029.1428610.1111/1556-4029.14286 ↗
10. 10.1016/j.fsigen.2020.10243010.1016/j.fsigen.2020.102430 ↗
11. 10.1371/journal.pone.002231610.1371/journal.pone.0022316 ↗
12. 10.1111/j.1556-4029.2006.00180.x10.1111/j.1556-4029.2006.00180.x ↗
13. 10.1038/srep3651510.1038/srep36515 ↗
14. 10.1016/j.fsigen.2020.10245110.1016/j.fsigen.2020.102451 ↗
15. 10.1021/ac900439b10.1021/ac900439b ↗
16. 10.1039/D0LC01198C10.1039/D0LC01198C ↗
17. 10.1021/acs.analchem.8b0475210.1021/acs.analchem.8b04752 ↗
18. 10.1371/journal.pone.021181010.1371/journal.pone.0211810 ↗
19. 10.1111/1556-4029.1537910.1111/1556-4029.15379 ↗
20. 10.1016/j.fsigen.2018.03.00110.1016/j.fsigen.2018.03.001 ↗
21. 10.1038/318577a010.1038/318577a0 ↗
22. 10.1016/0379-0738(94)01668-U10.1016/0379-0738(94)01668-U ↗
23. 10.1016/j.fsigen.2013.06.01510.1016/j.fsigen.2013.06.015 ↗
24. 10.1111/j.1556-4029.2006.00112.x10.1111/j.1556-4029.2006.00112.x ↗
25. 10.1016/j.fsigen.2010.12.01510.1016/j.fsigen.2010.12.015 ↗
26. 10.1111/j.1556-4029.2007.00453.x10.1111/j.1556-4029.2007.00453.x ↗
27. Lounsbury J. A. · Forensic Sci. Rev. · 2012 · 24 · 123
28. 10.1016/j.fsigen.2018.06.01410.1016/j.fsigen.2018.06.014 ↗
29. 10.1016/j.aca.2020.07.05910.1016/j.aca.2020.07.059 ↗
30. 10.1186/2041-2223-2-1110.1186/2041-2223-2-11 ↗
31. 10.1111/j.1556-4029.2008.00672.x10.1111/j.1556-4029.2008.00672.x ↗
32. Guide to All Things Rapid DNA Federal Bureau Of Investigation 2023.
33. 10.1111/j.1556-4029.2008.00697.x10.1111/j.1556-4029.2008.00697.x ↗
34. 10.1016/j.jala.2007.08.00110.1016/j.jala.2007.08.001 ↗
35. 10.1016/j.fsigen.2019.02.01110.1016/j.fsigen.2019.02.011 ↗
36. 10.1080/20961790.2019.164647910.1080/20961790.2019.1646479 ↗
37. 10.1016/j.aca.2017.04.04010.1016/j.aca.2017.04.040 ↗
38. 10.1111/j.1556-4029.2007.00468.x10.1111/j.1556-4029.2007.00468.x ↗
39. 10.1063/1.492845310.1063/1.4928453 ↗
40. 10.1016/j.fsigen.2022.10282410.1016/j.fsigen.2022.102824 ↗
41. 10.3390/bios603004110.3390/bios6030041 ↗
42. 10.1002/advs.20180012110.1002/advs.201800121 ↗
43. 10.1021/ac048623910.1021/ac0486239 ↗
44. 10.1111/j.1556-4029.2006.00054.x10.1111/j.1556-4029.2006.00054.x ↗
45. 10.1007/s00414-011-0636-810.1007/s00414-011-0636-8 ↗
46. 10.1146/annurev-anchem-062011-14302810.1146/annurev-anchem-062011-143028 ↗
47. 10.1146/annurev-bioeng-071114-04080810.1146/annurev-bioeng-071114-040808 ↗
48. 10.1063/1.480711810.1063/1.4807118 ↗
49. 10.1021/acsami.2c2028910.1021/acsami.2c20289 ↗
50. Dimov N. · JoVE J. Vis. Exp. · 2020 · 156
51. 10.1371/journal.pone.027874910.1371/journal.pone.0278749 ↗
52. 10.1021/acs.analchem.0c0161310.1021/acs.analchem.0c01613 ↗
53. 10.1126/sciadv.abd645410.1126/sciadv.abd6454 ↗
54. 10.1126/scitranslmed.aar607610.1126/scitranslmed.aar6076 ↗
55. 10.1039/C9LC01042D10.1039/C9LC01042D ↗
56. 10.1021/acs.analchem.8b0537510.1021/acs.analchem.8b05375 ↗
57. 10.1039/D1LC01068A10.1039/D1LC01068A ↗
58. 10.1016/j.fsigen.2016.04.00710.1016/j.fsigen.2016.04.007 ↗
59. 10.1016/j.fsigen.2009.07.00310.1016/j.fsigen.2009.07.003 ↗
60. Butler J. M. · 2012 · 497
61. Butler J. M. · 2012 · 167
62. 10.1016/j.fsigen.2011.02.00110.1016/j.fsigen.2011.02.001 ↗
63. 10.1155/2015/36567410.1155/2015/365674 ↗
64. 10.1016/j.chroma.2022.46366610.1016/j.chroma.2022.463666 ↗
65. 10.1038/s41598-021-87046-910.1038/s41598-021-87046-9 ↗
66. 10.1039/C6LC00256K10.1039/C6LC00256K ↗
67. 10.1039/D3SC00560G10.1039/D3SC00560G ↗
68. 10.1093/clinchem/hvab18010.1093/clinchem/hvab180 ↗
69. 10.1021/acs.langmuir.9b0022010.1021/acs.langmuir.9b00220 ↗