journal article·2025-03Open access

Automated and Efficient Sampling of Chemical Reaction Space

Minhyeok Lee, Umit V. Ucak, Jinyoung Jeong, Islambek Ashyrmamatov, Juyong Lee, Eunji Sim

Advanced Science· Volume 12· Issue 9

Abstract

Abstract Machine learning interatomic potentials (MLIPs) promise quantum‐level accuracy at classical force field speeds, but their performance hinges on the quality and diversity of training data. An efficient and fully automated approach to sample chemical reaction space without relying on human intuition, addressing a critical gap in MLIP development is presented. The method combines the speed of tight‐binding calculations with selective high‐level refinement, generating diverse datasets that capture both equilibrium and reactive regions of potential energy surfaces. By employing single‐ended growing string and nudged elastic band methods, reaction pathways previously underrepresented in MLIP training sets, particularly near transition states are systematically explored. This approach yields datasets with rich structural and chemical diversity, essential for robust MLIP development. Open‐source code is provided for the entire workflow, facilitating the integration of the approach into existing MLIP development pipelines.
Source: crossref · Quality: baseline

Research context

OpenAlex topics: Computational Drug Discovery Methods · Machine Learning in Materials Science · Advanced Data Processing Techniques

SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.

Affiliations

Department of Chemistry Yonsei University 50 Yonsei‐ro, Seodaemun‐gu Seoul 03722 Republic of Korea

Research Institute of Pharmaceutical Science, College of Pharmacy Seoul National University 1 Gwanak‐ro, Gwanak‐gu Seoul 08826 Republic of Korea

College of Pharmacy Seoul National University 1 Gwanak‐ro, Gwanak‐gu Seoul 08826 Republic of Korea

Department of Molecular Medicine and Biopharmaceutical Sciences, Graduate School of Convergence Science and Technology Seoul National University 1 Gwanak‐ro, Gwanak‐gu Seoul 08826 Republic of Korea

Arontier Co. 241, Gangnam‐daero, Seocho‐gu Seoul 06735 Republic of Korea

Funding

National Research Foundation of Korea · Korea Environmental Industry and Technology Institute

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