journal article·2024-12Open access

Enhanced Sensitivity of Cell Identification in Complex Environments Using Chirally Inverted L‐DNA‐Based Logic Devices

Zixi Lai, Di Jin, Yuan Tian, Xiaoxing Chen, Da Han, Haige Chen, Junyan Wang, Yang Yang

Advanced Science· Volume 11· Issue 45

Abstract

Abstract Accurate identification and isolation of target cells are crucial for precision diagnosis and treatment. DNA aptamer‐based logic devices provide a distinct advantage in this context, as they can logically analyze multiple cell surface markers with high efficiency. However, the susceptibility of natural DNA (D‐DNA) to degradation can compromise the sensitivity and specificity of these devices, potentially leading to false‐positive and false‐negative results, particularly in complex biological environments. To address this issue, dual‐ and triple‐aptamer‐based cell‐surface logic devices are designed and developed using mirror‐image L‐DNA, a chiral molecule of D‐DNA with high biostability. These devices allow for simultaneous analysis of multiple cell surface proteins, achieving greater specificity in cell identification and isolation than D‐DNA‐based logic devices. The L‐DNA probes realized 98.7% and 70.5% sensitivities in FBS buffer with dual‐ and triple‐aptamer‐based logic devices for target cell identification, while D‐DNA probes only showed 27.9% and 0.1%. It is believed that the high stability of L‐DNA and the high efficiency of the devices for labeling cell subpopulations will have broad applications in the life sciences, biomedical engineering, and personalized medicine.
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Research context

OpenAlex topics: Advanced biosensing and bioanalysis techniques · Biosensors and Analytical Detection · Molecular Junctions and Nanostructures

SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.

Affiliations

Shanghai Pulmonary Hospital School of Medicine Tongji University Shanghai 200092 China

Institute of Molecular Medicine (IMM) and Department of Urology Renji Hospital School of Medicine Shanghai Jiao Tong University Shanghai 200127 China

Hangzhou Institute of Medicine (HIM) Chinese Academy of Sciences Hangzhou Zhejiang 310022 China

Central Laboratory Shanghai Pulmonary Hospital School of Medicine Tongji University Shanghai 200433 China

School of Materials Science and Engineering Tongji University Shanghai 201804 China

Funding

National Key Research and Development Program of China · Program of Shanghai Academic Research Leader

References (32)

Show source-provided references
1. 10.1038/nchem.109010.1038/nchem.1090 ↗
2. 10.1016/j.cels.2020.08.00210.1016/j.cels.2020.08.002 ↗
3. 10.1038/s41587-023-01686-y10.1038/s41587-023-01686-y ↗
4. 10.1021/jacs.9b0547010.1021/jacs.9b05470 ↗
5. 10.1002/anie.20201119810.1002/anie.202011198 ↗
6. 10.1002/anie.20230983710.1002/anie.202309837 ↗
7. 10.1021/jacs.9b0559810.1021/jacs.9b05598 ↗
8. 10.1021/acscentsci.0c0076310.1021/acscentsci.0c00763 ↗
9. 10.1093/nar/gkm77110.1093/nar/gkm771 ↗
10. 10.1021/ja308243910.1021/ja3082439 ↗
11. 10.1021/acs.analchem.5b0417010.1021/acs.analchem.5b04170 ↗
12. 10.1021/jacs.7b0648510.1021/jacs.7b06485 ↗
13. 10.1002/ange.20230280510.1002/ange.202302805 ↗
14. 10.1038/s41587-021-00969-610.1038/s41587-021-00969-6 ↗
15. 10.1038/s41587-022-01337-810.1038/s41587-022-01337-8 ↗
16. 10.1021/jacs.3c0301010.1021/jacs.3c03010 ↗
17. 10.1002/chem.20190014910.1002/chem.201900149 ↗
18. 10.1021/ac300690r10.1021/ac300690r ↗
19. 10.1021/jacs.0c0955910.1021/jacs.0c09559 ↗
20. 10.1093/nar/gkac121010.1093/nar/gkac1210 ↗
21. 10.1021/acs.chemrev.3c0037710.1021/acs.chemrev.3c00377 ↗
22. 10.1038/nrd.2016.19910.1038/nrd.2016.199 ↗
23. 10.1038/s41587-022-01337-810.1038/s41587-022-01337-8 ↗
24. 10.1093/nar/gkac121010.1093/nar/gkac1210 ↗
25. 10.1021/jacs.0c0955910.1021/jacs.0c09559 ↗
26. 10.1021/pr700894d10.1021/pr700894d ↗
27. 10.1073/pnas.060261510310.1073/pnas.0602615103 ↗
28. 10.1021/ac070189y10.1021/ac070189y ↗
29. 10.1073/pnas.060261510310.1073/pnas.0602615103 ↗
30. 10.1021/jacs.0c1235810.1021/jacs.0c12358 ↗
31. 10.1126/sciadv.aax798310.1126/sciadv.aax7983 ↗
32. 10.1038/s42256-022-00502-710.1038/s42256-022-00502-7 ↗