journal article·2024-08Open access

Dynamic Addressing Molecular Robot (DAMR): An Effective and Efficient Trial‐and‐Error Approach for the Analysis of Single Nucleotide Polymorphisms

Tianshu Chen, Guifang Chen, Siyu Cao, Xiaochen Tang, Wenxing Li, Chenbin Liu, Hongquan Gou, Pei Sun, Yichun Mao, Qiuhui Pan, Penghui Zhang, Xiaoli Zhu

Advanced Science· Volume 11· Issue 31

Abstract

Abstract Accurate and efficient molecular recognition plays a crucial role in the fields of molecular detection and diagnostics. Conventional trial‐and‐error‐based molecular recognition approaches have always been challenged in distinguishing minimal differences between targets and non‐targets, such as single nucleotide polymorphisms (SNPs) of oligonucleotides. To address these challenges, here, a novel concept of dynamic addressing analysis is proposed. In this concept, by dissecting the regions of the target and creating a corresponding recognizer, it is possible to eliminate the inaccuracy and inefficiency of recognition. To achieve this concept, a Dynamic Addressing Molecular Robot (DAMR), a DNA‐based dynamic addressing device is developed which is capable of dynamically locating targets. DAMR is designed to first bind to the conserved region of the target while addressing the specific region dynamically until accurate recognition is achieved. DAMR has provided an approach for analyzing low‐resolution targets and has been used for analyzing SNP of miR‐196a2 in both cell and serum samples, which has opened new avenues for effective and efficient molecular recognition.
Source: crossref · Quality: baseline

Research context

OpenAlex topics: Advanced biosensing and bioanalysis techniques · DNA and Nucleic Acid Chemistry · RNA Interference and Gene Delivery

SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.

Affiliations

Clinical Laboratory, Shanghai Children's Medical Center School of Medicine Shanghai Jiao Tong University Shanghai 200127 P. R. China

Shanghai Key Laboratory of Clinical Molecular Diagnostics for Pediatrics Shanghai 200127 P. R. China

Center for Molecular Recognition and Biosensing, School of Life Sciences Shanghai University Shanghai 200444 P. R. China

Department of Clinical Laboratory Medicine Shanghai Tenth People's Hospital of Tongji University Shanghai 200072 P. R. China

Department of Laboratory Medicine Shanghai Pudong New Area People's Hospital Shanghai 201299 P. R. China

Funding

National Natural Science Foundation of China · Natural Science Foundation of Shanghai Municipality

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