In Vitro Models for Investigating Intestinal Host–Pathogen Interactions
Source abstract
Abstract
Abstract Infectious diseases are increasingly recognized as a major threat worldwide due to the rise of antimicrobial resistance and the emergence of novel pathogens. In vitro models that can adequately mimic in vivo gastrointestinal physiology are in high demand to elucidate mechanisms behind pathogen infectivity, and to aid the design of effective preventive and therapeutic interventions. There exists a trade‐off between simple and high throughput models and those that are more complex and physiologically relevant. The complexity of the model used shall be guided by the biological question to be addressed. This review provides an overview of the structure and function of the intestine and the models that are developed to emulate this. Conventional models are discussed in addition to emerging models which employ engineering principles to equip them with necessary advanced monitoring capabilities for intestinal host‐pathogen interrogation. Limitations of current models and future perspectives on the field are presented.
Source: crossref · Quality: baseline
Research context
OpenAlex topics: Viral gastroenteritis research and epidemiology · Clostridium difficile and Clostridium perfringens research · Bacteriophages and microbial interactions
SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.
Affiliations
Department of Chemical Engineering and Biotechnology University of Cambridge Cambridge CB3 0AS UK
Wellcome‐MRC Cambridge Stem Cell Institute University of Cambridge Cambridge CB2 0AW UK
Department of Pharmacology University of Cambridge Cambridge CB2 1PD UK
Funding
Air Force Office of Scientific Research
References (100+)
Show source-provided references
1. 10.1111/1462-2920.1392610.1111/1462-2920.13926 ↗
2. 10.1097/MIB.000000000000075010.1097/MIB.0000000000000750 ↗
3. 10.3402/mehd.v26.2619110.3402/mehd.v26.26191 ↗
4. 10.3389/fvets.2021.72338710.3389/fvets.2021.723387 ↗
5. 10.1038/emm.2017.2010.1038/emm.2017.20 ↗
6. 10.1196/annals.1326.01710.1196/annals.1326.017 ↗
7. 10.1021/acs.molpharmaceut.8b0105310.1021/acs.molpharmaceut.8b01053 ↗
8. 10.1038/3506708810.1038/35067088 ↗
9. 10.1146/annurev.cellbio.13.1.11910.1146/annurev.cellbio.13.1.119 ↗
10. 10.1101/cshperspect.a02788810.1101/cshperspect.a027888 ↗
11. 10.1083/jcb.20140701510.1083/jcb.201407015 ↗
12. 10.1152/ajpgi.00046.201310.1152/ajpgi.00046.2013 ↗
13. 10.4161/gmic.1.1.1047010.4161/gmic.1.1.10470 ↗
14. 10.1111/nmo.1275410.1111/nmo.12754 ↗
15. 10.3389/fendo.2017.0004710.3389/fendo.2017.00047 ↗
16. 10.1113/jphysiol.2008.16426910.1113/jphysiol.2008.164269 ↗
17. 10.1038/s41574-019-0155-010.1038/s41574-019-0155-0 ↗
18. 10.1002/bies.1002810.1002/bies.10028 ↗
19. 10.1101/gad.167400810.1101/gad.1674008 ↗
20. 10.15252/embr.20154018810.15252/embr.201540188 ↗
21. 10.1113/JP27166710.1113/JP271667 ↗
22. 10.1101/gad.26710310.1101/gad.267103 ↗
23. 10.1016/j.micinf.2005.04.00310.1016/j.micinf.2005.04.003 ↗
24. 10.1093/jmcb/mjaa03410.1093/jmcb/mjaa034 ↗
25. 10.3389/fimmu.2020.57029610.3389/fimmu.2020.570296 ↗
26. 10.1136/gut.2005.06860110.1136/gut.2005.068601 ↗
27. 10.1038/s41574-019-0168-810.1038/s41574-019-0168-8 ↗
28. 10.1097/MED.0b013e3282f43a7310.1097/MED.0b013e3282f43a73 ↗
29. 10.1093/ibd/izz21710.1093/ibd/izz217 ↗
30. 10.3389/fimmu.2022.82286710.3389/fimmu.2022.822867 ↗
31. 10.3390/pathogens1009116310.3390/pathogens10091163 ↗
32. 10.1146/annurev.cellbio.16.1.30110.1146/annurev.cellbio.16.1.301 ↗
33. 10.1242/dev.110.4.100110.1242/dev.110.4.1001 ↗
34. 10.1096/fasebj.6.12.152173710.1096/fasebj.6.12.1521737 ↗
35. 10.1016/j.jcmgh.2021.08.02110.1016/j.jcmgh.2021.08.021 ↗
36. 10.1172/JCI20051922910.1172/JCI200519229 ↗
37. 10.1038/s41423-019-0208-210.1038/s41423-019-0208-2 ↗
38. 10.1586/eci.10.3410.1586/eci.10.34 ↗
39. 10.1038/mi.2016.5910.1038/mi.2016.59 ↗
40. 10.1038/nri233510.1038/nri2335 ↗
41. 10.3748/wjg.v21.i29.878710.3748/wjg.v21.i29.8787 ↗
42. 10.4161/gmic.1932010.4161/gmic.19320 ↗
43. 10.1186/s12865-016-0187-310.1186/s12865-016-0187-3 ↗
44. 10.1007/s13770-023-00543-y10.1007/s13770-023-00543-y ↗
45. 10.1002/eji.183019082710.1002/eji.1830190827 ↗
46. 10.1038/7778310.1038/77783 ↗
47. 10.3389/fimmu.2020.0058710.3389/fimmu.2020.00587 ↗
48. 10.4161/19490976.2014.97223810.4161/19490976.2014.972238 ↗
49. 10.1038/nri373810.1038/nri3738 ↗
50. 10.1111/j.1365-2567.2006.02508.x10.1111/j.1365-2567.2006.02508.x ↗
51. 10.1038/ni1101-100410.1038/ni1101-1004 ↗
52. 10.1016/S0016-5085(74)80102-210.1016/S0016-5085(74)80102-2 ↗
53. 10.1111/imr.1218910.1111/imr.12189 ↗
54. 10.1111/imr.1240010.1111/imr.12400 ↗
55. 10.1111/j.1365-2249.2008.03713.x10.1111/j.1365-2249.2008.03713.x ↗
56. 10.1038/nature1247910.1038/nature12479 ↗
57. 10.1038/nn.314410.1038/nn.3144 ↗
58. 10.1038/jcbfm.1987.12610.1038/jcbfm.1987.126 ↗
59. 10.4049/jimmunol.150.10.447810.4049/jimmunol.150.10.4478 ↗
60. 10.1186/s13756-021-00903-010.1186/s13756-021-00903-0 ↗
61. 10.1371/journal.ppat.100478710.1371/journal.ppat.1004787 ↗
62. 10.1038/nrmicro220410.1038/nrmicro2204 ↗
63. 10.1371/journal.pntd.000433010.1371/journal.pntd.0004330 ↗
64. 10.3389/fcimb.2020.57209610.3389/fcimb.2020.572096 ↗
65. 10.3389/fcimb.2020.60770410.3389/fcimb.2020.607704 ↗
66. 10.1128/JB.186.11.3296-3303.200410.1128/JB.186.11.3296-3303.2004 ↗
67. 10.1080/19490976.2022.209137110.1080/19490976.2022.2091371 ↗
68. 10.1080/19490976.2015.101669110.1080/19490976.2015.1016691 ↗
69. 10.1038/nrmicro115010.1038/nrmicro1150 ↗
70. 10.4161/gmic.1939910.4161/gmic.19399 ↗
71. 10.1586/14787210.2014.86651510.1586/14787210.2014.866515 ↗
72. 10.3390/ijms2403244810.3390/ijms24032448 ↗
73. 10.1128/9781683670261.ch210.1128/9781683670261.ch2 ↗
74. 10.1128/CMR.14.3.584-640.200110.1128/CMR.14.3.584-640.2001 ↗
75. 10.1080/21505594.2021.197552610.1080/21505594.2021.1975526 ↗
76. 10.3390/microorganisms1008152210.3390/microorganisms10081522 ↗
77. 10.1038/nrmicro.2017.12610.1038/nrmicro.2017.126 ↗
78. 10.1128/CMR.00066-1210.1128/CMR.00066-12 ↗
79. 10.1080/21553769.2015.105124310.1080/21553769.2015.1051243 ↗
80. Ahmad Bhat K. · 2022 · Ch. 3
81. 10.1016/S0934-8840(11)80838-810.1016/S0934-8840(11)80838-8 ↗
82. 10.3389/fcimb.2013.0001510.3389/fcimb.2013.00015 ↗
83. 10.3389/fcimb.2016.0012910.3389/fcimb.2016.00129 ↗
84. 10.3389/fcimb.2012.0008110.3389/fcimb.2012.00081 ↗
85. 10.1128/JVI.00204-1410.1128/JVI.00204-14 ↗
86. 10.1126/science.aaf521110.1126/science.aaf5211 ↗
87. 10.1038/s41564-017-0057-710.1038/s41564-017-0057-7 ↗
88. 10.1038/nprot.2015.12110.1038/nprot.2015.121 ↗
89. 10.1371/journal.ppat.100462610.1371/journal.ppat.1004626 ↗
90. 10.3390/v1405087510.3390/v14050875 ↗
91. 10.3389/fimmu.2021.79384110.3389/fimmu.2021.793841 ↗
92. 10.1073/pnas.161905111410.1073/pnas.1619051114 ↗
93. 10.3390/biomedicines703006110.3390/biomedicines7030061 ↗
94. 10.1016/0092-8674(93)90231-E10.1016/0092-8674(93)90231-E ↗
95. 10.1146/annurev-virology-101416-04174210.1146/annurev-virology-101416-041742 ↗
96. 10.1128/JVI.00942-0710.1128/JVI.00942-07 ↗
97. 10.1371/journal.pbio.300181510.1371/journal.pbio.3001815 ↗
98. 10.1111/tbed.1397910.1111/tbed.13979 ↗
99. 10.3390/v901002210.3390/v9010022 ↗
100. 10.1016/B978-0-12-375156-0.00034-510.1016/B978-0-12-375156-0.00034-5 ↗