journal article·2023-08Open access

Exploring the Potential of Three‐Dimensional DNA Crystals in Nanotechnology: Design, Optimization, and Applications

Huating Kong, Bo Sun, Feng Yu, Qisheng Wang, Kai Xia, Dawei Jiang

Advanced Science· Volume 10· Issue 24

Abstract

Abstract DNA has been used as a robust material for the building of a variety of nanoscale structures and devices owing to its unique properties. Structural DNA nanotechnology has reported a wide range of applications including computing, photonics, synthetic biology, biosensing, bioimaging, and therapeutic delivery, among others. Nevertheless, the foundational goal of structural DNA nanotechnology is exploiting DNA molecules to build three‐dimensional crystals as periodic molecular scaffolds to precisely align, obtain, or collect desired guest molecules. Over the past 30 years, a series of 3D DNA crystals have been rationally designed and developed. This review aims to showcase various 3D DNA crystals, their design, optimization, applications, and the crystallization conditions utilized. Additionally, the history of nucleic acid crystallography and potential future directions for 3D DNA crystals in the era of nanotechnology are discussed.
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Research context

OpenAlex topics: Advanced biosensing and bioanalysis techniques · DNA and Nucleic Acid Chemistry · RNA Interference and Gene Delivery

SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.

Affiliations

Shanghai Synchrotron Radiation Facility Shanghai Advanced Research Institute Chinese Academy of Sciences Shanghai 201204 China

Shanghai Frontier Innovation Research Institute Shanghai 201108 China

Shanghai Stomatological Hospital Fudan University Shanghai 200031 China

Wuhan Union Hospital Tongji Medical College Huazhong University of Science and Technology Wuhan 430022 China

Hubei Key Laboratory of Molecular Imaging Wuhan 430022 China

Key Laboratory of Biological Targeted Therapy the Ministry of Education Wuhan 430022 China

Funding

National Natural Science Foundation of China · Natural Science Foundation of Shanghai Municipality

References (93)

Show source-provided references
1. 10.1126/science.126090110.1126/science.1260901 ↗
2. 10.1038/s41576-019-0175-610.1038/s41576-019-0175-6 ↗
3. 10.1021/acs.chemrev.0c0029410.1021/acs.chemrev.0c00294 ↗
4. 10.1038/s41551-018-0317-810.1038/s41551-018-0317-8 ↗
5. 10.1038/s41557-020-00611-z10.1038/s41557-020-00611-z ↗
6. 10.1038/s41563-020-0793-610.1038/s41563-020-0793-6 ↗
7. 10.1038/s41565-021-00988-z10.1038/s41565-021-00988-z ↗
8. 10.1016/0022-5193(82)90002-910.1016/0022-5193(82)90002-9 ↗
9. 10.1038/nnano.2011.18710.1038/nnano.2011.187 ↗
10. 10.3390/cryst608009710.3390/cryst6080097 ↗
11. 10.1038/s41563-020-0719-310.1038/s41563-020-0719-3 ↗
12. 10.1016/j.chembiol.2004.05.02110.1016/j.chembiol.2004.05.021 ↗
13. 10.1038/nature0827410.1038/nature08274 ↗
14. 10.1021/jacs.6b0650810.1021/jacs.6b06508 ↗
15. 10.1021/acs.nanolett.7b0098010.1021/acs.nanolett.7b00980 ↗
16. 10.1093/nar/gkv03310.1093/nar/gkv033 ↗
17. 10.1002/bip.2268810.1002/bip.22688 ↗
18. 10.1002/cbic.20150061010.1002/cbic.201500610 ↗
19. 10.1002/adma.20170101910.1002/adma.201701019 ↗
20. 10.1021/jacs.6b1252810.1021/jacs.6b12528 ↗
21. 10.1021/ja061322r10.1021/ja061322r ↗
22. 10.1021/ja302503310.1021/ja3025033 ↗
23. 10.1021/ja502356m10.1021/ja502356m ↗
24. 10.1021/ja104833t10.1021/ja104833t ↗
25. 10.1002/jmr.108210.1002/jmr.1082 ↗
26. 10.1002/jmr.218310.1002/jmr.2183 ↗
27. 10.1021/acsnano.6b0478710.1021/acsnano.6b04787 ↗
28. 10.1016/j.chembiol.2017.08.01810.1016/j.chembiol.2017.08.018 ↗
29. 10.1016/j.jcrysgro.2017.07.01910.1016/j.jcrysgro.2017.07.019 ↗
30. 10.1021/acsnano.1c0696310.1021/acsnano.1c06963 ↗
31. 10.1021/nl304550c10.1021/nl304550c ↗
32. 10.1021/jacs.1c0727910.1021/jacs.1c07279 ↗
33. 10.1016/j.bpj.2022.09.03610.1016/j.bpj.2022.09.036 ↗
34. 10.1002/anie.20130991410.1002/anie.201309914 ↗
35. 10.1002/anie.20150361010.1002/anie.201503610 ↗
36. 10.1039/C6CC03695C10.1039/C6CC03695C ↗
37. 10.1021/jacs.2c1266710.1021/jacs.2c12667 ↗
38. 10.1002/anie.20180975710.1002/anie.201809757 ↗
39. 10.1021/acsnano.9b0243010.1021/acsnano.9b02430 ↗
40. 10.1021/jacs.9b0661310.1021/jacs.9b06613 ↗
41. 10.1021/acs.jpcb.6b0938510.1021/acs.jpcb.6b09385 ↗
42. 10.1038/nchem.274510.1038/nchem.2745 ↗
43. 10.1002/anie.20170046210.1002/anie.201700462 ↗
44. 10.1002/adma.20220044110.1002/adma.202200441 ↗
45. 10.1021/jacs.7b0648510.1021/jacs.7b06485 ↗
46. 10.1002/anie.20180722310.1002/anie.201807223 ↗
47. 10.1002/anie.20200550510.1002/anie.202005505 ↗
48. 10.1038/s41467-022-30779-610.1038/s41467-022-30779-6 ↗
49. 10.1021/jacs.8b0914310.1021/jacs.8b09143 ↗
50. 10.1088/1361-648X/aaf4a110.1088/1361-648X/aaf4a1 ↗
51. 10.1038/171740a010.1038/171740a0 ↗
52. 10.1038/171737a010.1038/171737a0 ↗
53. 10.1126/science.179.4070.28510.1126/science.179.4070.285 ↗
54. 10.1038/287755a010.1038/287755a0 ↗
55. 10.1038/1327710.1038/13277 ↗
56. 10.1038/nmat437610.1038/nmat4376 ↗
57. 10.1038/382607a010.1038/382607a0 ↗
58. 10.1038/382609a010.1038/382609a0 ↗
59. 10.1038/s41586-022-05232-910.1038/s41586-022-05232-9 ↗
60. 10.1002/adma.20180548010.1002/adma.201805480 ↗
61. 10.1038/s41578-019-0087-210.1038/s41578-019-0087-2 ↗
62. 10.1002/anie.20210567810.1002/anie.202105678 ↗
63. 10.1038/s41586-022-05291-y10.1038/s41586-022-05291-y ↗
64. 10.1038/nmat457110.1038/nmat4571 ↗
65. 10.1021/ja710710j10.1021/ja710710j ↗
66. 10.1038/s41563-020-0643-610.1038/s41563-020-0643-6 ↗
67. 10.1038/s41586-021-03355-z10.1038/s41586-021-03355-z ↗
68. 10.1038/nature0458610.1038/nature04586 ↗
69. 10.1016/j.cbpa.2010.06.18210.1016/j.cbpa.2010.06.182 ↗
70. 10.1038/s41467-021-23332-410.1038/s41467-021-23332-4 ↗
71. 10.1002/adma.20180027310.1002/adma.201800273 ↗
72. 10.1038/s41467-020-19439-910.1038/s41467-020-19439-9 ↗
73. 10.1038/s41563-019-0550-x10.1038/s41563-019-0550-x ↗
74. 10.1021/acs.nanolett.1c0060710.1021/acs.nanolett.1c00607 ↗
75. 10.1021/jacs.2c1075510.1021/jacs.2c10755 ↗
76. 10.1021/jacs.0c0852510.1021/jacs.0c08525 ↗
77. 10.1021/jacs.3c0008110.1021/jacs.3c00081 ↗
78. 10.1002/anie.20160023310.1002/anie.201600233 ↗
79. 10.1126/sciadv.abf445910.1126/sciadv.abf4459 ↗
80. 10.1039/c1cs15020k10.1039/c1cs15020k ↗
81. 10.3390/ijms903025810.3390/ijms9030258 ↗
82. Wang Q. S. · Nucl. Sci. Tech. · 2015 · 26 · 12
83. Zhang W. Z. · Nucl. Sci. Tech. · 2019 · 30
84. Wang Q. S. · Nucl. Sci. Tech. · 2018 · 29
85. 10.1093/nsr/nwaa05510.1093/nsr/nwaa055 ↗
86. Kong H. T. · Am. J. Nucl. Med. Molec. Imaging · 2021 · 11 · 7
87. 10.1038/nnano.2009.5010.1038/nnano.2009.50 ↗
88. 10.1021/cr200104q10.1021/cr200104q ↗
89. 10.1002/cbic.20200037210.1002/cbic.202000372 ↗
90. 10.3390/app1106280210.3390/app11062802 ↗
91. 10.1002/anie.20211515510.1002/anie.202115155 ↗
92. 10.1016/j.bpj.2022.08.01910.1016/j.bpj.2022.08.019 ↗
93. 10.1039/D1CC04311K10.1039/D1CC04311K ↗