Modulation of peptidoglycan crosslink network in Escherichia coli enhances water-responsive actuation
Source abstract
Abstract
Peptidoglycan (PG), the primary load-bearing component of bacterial cell envelopes, is a bio-derived material whose mechanical and hydration properties are central to microbial viability and their environmental responsiveness. PG has been increasingly recognized as a scalable water-responsive (WR) material, capable of converting chemical potential gradients from ambient changes in relative humidity (RH) directly into mechanical work. In this study, we leverage stress-induced PG remodeling pathways in a BB-3 Escherichia coli (E. coli) strain to modulate the architecture of its PG sacculus for enhanced WR performance. Under arabinose-deprived conditions (-Ara), BB-3 PG exhibits a twofold increase in the ratio of crosslinked-to-linear muropeptide stems and a threefold rise in the relative abundance of ③-③ (mDap-mDap) linkages relative to an arabinose-rich (+Ara) control. When responding to RH changes between 10 % and 90 % RH, these molecular-level modifications translated into a fivefold increase in WR actuation energy density (623.0 kJ/m³) with rapid response times on the order of seconds (τd: 1.8 s, τh: 0.7 s). The remodeled PG also displays a significant increase in stiffness (E: 8.9 GPa at 10 % RH) and an 8 % greater uptake of water, driving the PG matrix to generate twofold higher WR strain (ε: 30.2 %). The observed increases in water retention and WR behavior of E. coli PG may also carry intriguing evolutionary implications, reflecting adaptive strategies microbes take to restructure PG layers and survive under microenvironmental nutrient scarcity. STATEMENT OF SIGNIFICANCE: Current testing of water responsive (WR) biomaterials has focused on a narrow subset of microbial species, leaving Gram-negative bacteria largely unexplored. Our work addresses this gap by demonstrating that the peptidoglycan (PG) sacculus of E. coli also exhibits robust WR properties. Through leveraging genetic and environmental stresses during the organism's growth phase, we demonstrate that the topology, mechanical stiffness, and water partitioning behavior of PG networks can be rationally improved to yield enhanced actuator materials. By establishing a connection between PG crosslinking architecture and emergent mechanical and hydration dynamics, we present a promising approach to engineer dynamic and sustainable WR materials from living systems that can be employed as active components in high-performance actuators.
Source: europepmc · Quality: candidate unverified · Source record ↗
Research context
OpenAlex topics: Bacterial Genetics and Biotechnology · Bacterial biofilms and quorum sensing · Bacteriophages and microbial interactions
SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.
References (84)
Show source-provided references
1. Bacterial biofilms: from the natural environment to infectious diseases10.1038/nrmicro821 ↗
2. Bacterial interactions in biofilms10.1080/10408410902809431 ↗
3. Water in bacterial biofilms: pores and channels, storage and transport functions10.1080/1040841X.2021.1962802 ↗
4. Bacterial biopolymers: from pathogenesis to advanced materials10.1038/s41579-019-0313-3 ↗
5. Programmable bacterial biofilms as engineered living materials10.1021/accountsmr.3c00271 ↗
6. Biomedical applications of bacteria-derived polymers10.3390/polym13071081 ↗
7. Scaling up nanoscale water-driven energy conversion into evaporation-driven engines and generators10.1038/ncomms8346 ↗
8. Shape memory polymers based on supramolecular interactions10.1021/acsami.7b03624 ↗
9. Smart soft materials with multiscale architecture and dynamic surface topographies10.1021/accountsmr.2c00111 ↗
10. Engineered Living materials: prospects and challenges for using biological systems to direct the assembly of smart materials
11. High energy and power density peptidoglycan muscles through super-viscous nanoconfined water
12. Water-responsive supercontractile polymer films for bioelectronic interfaces10.1038/s41586-023-06732-y ↗
13. Fabrication of moisture-responsive crystalline smart materials for water harvesting and electricity transduction10.1021/jacs.1c01831 ↗
14. Experimental design and evaluation of a moisture responsive sports bra10.1186/s40691-020-00209-6 ↗
15. Integrated textile sensor patch for real-time and multiplex sweat analysis10.1126/sciadv.aax0649 ↗
16. Water responsive fabrics with artificial leaf stomata10.1007/s42765-023-00269-5 ↗
17. Maximizing signal capacity via intrinsic damped vibration of anisotropic magnetized micropillars for wearable human-machine interface10.1016/j.cej.2025.167133 ↗
18. Spore-based water-resistant water-responsive actuators with high power density10.1002/admt.201800596 ↗
19. Water-content-dependent morphologies and mechanical properties of Bacillus subtilis spores’ Cortex peptidoglycan10.1021/acsbiomaterials.2c01209 ↗
20. Hydrogen-bonding-dependent water-responsive actuation of Bacillus subtilis cell walls10.1021/acs.langmuir.5c00490 ↗
21. Reconstitution of peptidoglycan cross-linking leads to improved fluorescent probes of cell wall synthesis10.1021/ja505668f ↗
22. The outer membrane is an essential load-bearing element in gram-negative bacteria10.1038/s41586-018-0344-3 ↗
23. Tardigrades use intrinsically disordered proteins to survive desiccation10.1016/j.molcel.2017.02.018 ↗
24. Desiccation tolerance and water-retentive mechanisms in Tardigrades10.1242/jeb.142.1.267 ↗
25. General mechanisms of drought response and their application in drought resistance improvement in plants10.1007/s00018-014-1767-0 ↗
26. A network of regulators promotes dehydration tolerance in Escherichia coli10.1111/1462-2920.14074 ↗
27. Non-essential KDO biosynthesis and new essential cell envelope biogenesis genes in the Escherichia coli yrbG–yhbG locus10.1016/j.resmic.2005.11.014 ↗
28. Chapter 26: an introduction to chromatographic separations
29. Best practices and benchmarks for intact protein analysis for top-down mass spectrometry10.1038/s41592-019-0457-0 ↗
30. mMass 3: a cross-platform software environment for precise analysis of mass spectrometric data10.1021/ac100818g ↗
31. Structure-dependent water responsiveness of protein block copolymers10.1021/acsabm.4c00045 ↗
32. Atomic force microscopy determination of Young׳s modulus of bovine extra-ocular tendon fiber bundles10.1016/j.jbiomech.2014.02.011 ↗
33. The role of water mobility on water-responsive actuation of silk10.1038/s41467-024-52715-6 ↗
34. Suppressor mutations in LptF bypass essentiality of LptC by forming a six-protein transenvelope bridge that efficiently transports lipopolysaccharide
35. Outer membrane-anchoring enables LpoB to regulate peptidoglycan synthesis rate10.1016/j.tcsw.2022.100086 ↗
36. Complex transcriptional organization regulates an Escherichia coli locus implicated in lipopolysaccharide biogenesis10.1016/j.resmic.2011.03.007 ↗
37. Peptidoglycan remodeling enables Escherichia coli to survive severe outer membrane assembly defect10.1128/mBio.02729-18 ↗
38. Degradation of components of the lpt transenvelope machinery reveals LPS-dependent lpt complex stability in Escherichia coli10.3389/fmolb.2021.758228 ↗
39. Regulation of peptidoglycan synthesis and remodelling10.1038/s41579-020-0366-3 ↗
40. Three-dimensional structure of the bacterial cell wall peptidoglycan10.1073/pnas.0510182103 ↗
41. Peptidoglycan structure and architecture10.1111/j.1574-6976.2007.00094.x ↗
42. ᴅ-amino acids govern stationary phase cell wall remodeling in bacteria10.1126/science.1178123 ↗
43. Factors essential for ʟ,ᴅ-transpeptidase-mediated peptidoglycan cross-linking and β-lactam resistance in Escherichia coli10.7554/eLife.19469 ↗
44. Identification of the ʟ,ᴅ-transpeptidases for peptidoglycan cross-linking in Escherichia coli10.1128/JB.00025-08 ↗
45. Peptidoglycan remodeling by an ʟ,ᴅ-transpeptidase, LdtD during cold shock in Escherichia coli
46. A fly on the wall: how stress response systems can sense and respond to damage to peptidoglycan10.3389/fcimb.2019.00380 ↗
47. Semi-quantitative analysis of peptidoglycan by liquid chromatography mass spectrometry and bioinformatics
48. Cleavage of Braun's lipoprotein lpp from the bacterial peptidoglycan by a paralog of ʟ,ᴅ-transpeptidases
49. Peptidoglycan structure analysis of lactococcus lactis reveals the presence of an ʟ,ᴅ-carboxypeptidase involved in Peptidoglycan maturation10.1128/JB.00285-06 ↗
50. Isolation and preparation of bacterial cell walls for compositional analysis by Ultra performance liquid chromatography
51. Peptidoglycan at its peaks: how chromatographic analyses can reveal bacterial cell wall structure and assembly10.1111/mmi.12266 ↗
52. Chapter 13 - MALDI-TOF mass spectrometry applied to classification and identification of bacteria10.1016/bs.mim.2014.06.002 ↗
53. Structural characterization of peptidoglycan muropeptides by matrix-assisted laser desorption ionization mass spectrometry and postsource decay analysis10.1006/abio.1997.2073 ↗
54. Characterization and discrimination of gram-positive bacteria using raman spectroscopy with the aid of principal component analysis10.3390/nano7090248 ↗
55. Infrared spectroscopy, a tool for probing bacterial peptidoglycan10.1111/j.1432-1033.1982.tb06711.x ↗
56. Vibrational spectroscopic analysis of LD-sequential, bacterial cell wall peptides: an IR and raman study10.1002/bip.360260603 ↗
57. Bioremediation of crystal violet by organic matter and assessment of antimicrobial properties of the obtained product10.3390/su15010067 ↗
58. Ueber die isolirte farbung der schizomyceten in Schnitt-und Trockenpraparaten
59. Structural characterization of an abnormally cross-linked muropeptide dimer that is accumulated in the peptidoglycan of methicillin- and cefotaxime-resistant mutants of Staphylococcus aureus10.1074/jbc.272.46.29053 ↗
60. Peptide sequence information derived by pronase digestion and ammonium sulfate in-source decay matrix-assisted laser desorption/ionization time-of-flight mass spectrometry10.1016/S1044-0305(00)00170-7 ↗
61. The proteolytic enzymes of the K-1 strain of Streptomyces griseus obtained from a commercial preparation (Pronase). Specificity and immobilization of aminopeptidase10.1016/S0021-9258(19)41494-4 ↗
62. Imaging the ultrastructure of isolated peptidoglycan sacculi from rod-shaped Helicobacter pylori J99 cells by Atomic Force microscopy10.3390/molecules30010155 ↗
63. Reactions of all Escherichia coli lytic transglycosylases with bacterial cell wall10.1021/ja309036q ↗
64. Cell wall synthesis and remodelling dynamics determine division site architecture and cell shape in Escherichia coli10.1038/s41564-022-01210-z ↗
65. Bacterial cell mechanics10.1021/acs.biochem.7b00346 ↗
66. The architecture of the gram-positive bacterial cell wall10.1038/s41586-020-2236-6 ↗
67. Measuring viscoelasticity of soft biological samples using atomic force microscopy10.1039/C9SM01020C ↗
68. Hydration solids10.1038/s41586-023-06144-y ↗
69. Measuring the elastic properties of living cells
70. Measuring the elastic modulus of soft biomaterials using nanoindentation10.1016/j.jmbbm.2022.105329 ↗
71. Understanding the mechanical behaviour of human enamel from its structural and compositional characteristics10.1016/j.jmbbm.2007.05.001 ↗
72. Pore size-dependent structure of confined water in mesoporous silica films from water adsorption/desorption using ATR–FTIR spectroscopy10.1021/acs.langmuir.9b01435 ↗
73. Direct observation of bound water on cotton surfaces by atomic force microscopy and atomic force microscopy–Infrared spectroscopy10.1021/acs.jpcc.0c00423 ↗
74. NMR and IR investigations of strong intramolecular hydrogen bonds10.3390/molecules22040552 ↗
75. Infrared spectra and hydrogen-bond configurations of water molecules at the interface of water-insoluble polymers under humidified conditions10.1021/acs.jpcb.2c01702 ↗
76. Jeffrey · 1997
77. Membranes with different hydration levels: the interface between bound and unbound hydration water10.1016/j.molliq.2018.10.074 ↗
78. Cellular mechanisms and regulation of quiescence10.1016/j.devcel.2020.09.029 ↗
79. The normalcy of dormancy: common themes in microbial quiescence10.1016/j.chom.2013.05.012 ↗
80. Influence of stream-subsurface exchange flux and bacterial biofilms on oxygen consumption under nutrient-rich conditions10.1029/2017JG004372 ↗
81. Water flow promotes nutrient release and microbial community assembly during Hydrilla verticillata decomposition10.1016/j.jclepro.2023.139464 ↗
82. Peptidoglycan sensing prevents quiescence and promotes quorum-independent colony growth of uropathogenic Escherichia coli10.1128/JB.00157-20 ↗
83. Observations on the strength of hydrogen bonding10.1023/A:1008743229409 ↗
84. Contour length and refolding rate of a small protein controlled by engineered disulfide bonds10.1529/biophysj.106.091561 ↗