journal article·2023-05Open access

Multiscale mechanical characterization and computational modeling of fibrin gels

Julian M. Jimenez, Tyler Tuttle, Yifan Guo, Dalton Miles, Adrian Buganza-Tepole, Sarah Calve

Acta Biomaterialia· Volume 162

Abstract

Fibrin is a naturally occurring protein network that forms a temporary structure to enable remodeling during wound healing. It is also a common tissue engineering scaffold because the structural properties can be controlled. However, to fully characterize the wound healing process and improve the design of regenerative scaffolds, understanding fibrin mechanics at multiple scales is necessary. Here, we present a strategy to quantify both the macroscale (1-10 mm) stress-strain response and the deformation of the mesoscale (10-1000 µm) network structure during unidirectional tensile tests. The experimental data were then used to inform a computational model to accurately capture the mechanical response of fibrin gels. Simultaneous mechanical testing and confocal microscopy imaging of fluorophore-conjugated fibrin gels revealed up to an 88% decrease in volume coupled with increase in volume fraction in deformed gels, and non-affine fiber alignment in the direction of deformation. Combination of the computational model with finite element analysis enabled us to predict the strain fields that were observed experimentally within heterogenous fibrin gels with spatial variations in material properties. These strategies can be expanded to characterize and predict the macroscale mechanics and mesoscale network organization of other heterogeneous biological tissues and matrices. STATEMENT OF SIGNIFICANCE: Fibrin is a naturally-occurring scaffold that supports cellular growth and assembly of de novo tissue and has tunable material properties. Characterization of meso- and macro-scale mechanics of fibrin gel networks can advance understanding of the wound healing process and impact future tissue engineering approaches. Using structural and mechanical characteristics of fibrin gels, a theoretical and computational model that can predict multiscale fibrin network mechanics was developed. These data and model can be used to design gels with tunable properties.
Source: europepmc · Quality: candidate unverified · Source record ↗

Research context

OpenAlex topics: Blood properties and coagulation · Elasticity and Material Modeling · Cellular Mechanics and Interactions

SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.

References (59)

Show source-provided references
1. Fibrin gels and their clinical and bioengineering applications10.1098/rsif.2008.0327 ↗
2. Fibrin mechanical properties and their structural origins10.1016/j.matbio.2016.08.003 ↗
3. Temperature dependence of fibrin polymerization: a light scattering study10.1021/bi00344a060 ↗
4. Regulatory element in fibrin triggers tension-activated transition from catch to slip bonds10.1073/pnas.1802576115 ↗
5. Atomic structural models of fibrin oligomers10.1016/j.str.2018.04.005 ↗
6. Mechanical transition from α-helical coiled coils to β-sheets in fibrin(ogen)10.1021/ja3076428 ↗
7. Multiscale mechanics of fibrin polymer: gel stretching with protein unfolding and loss of water10.1126/science.1172484 ↗
8. Micro-scale and meso-scale architectural cues cooperate and compete to direct aligned tissue formation10.1016/j.biomaterials.2014.08.047 ↗
9. Rupture of blood clots: Mechanics and pathophysiology10.1126/sciadv.abc0496 ↗
10. Strength and deformability of fibrin clots: biomechanics, thermodynamics, and mechanisms of rupture10.1016/j.actbio.2021.06.046 ↗
11. Forced unfolding of coiled-coils in fibrinogen by single-molecule AFM10.1529/biophysj.106.101261 ↗
12. Nonuniform internal structure of fibrin fibers: protein density and bond density strongly decrease with increasing diameter
13. Multiscale network modeling of fibrin fibers and fibrin clots with protofibril binding mechanics10.3390/polym12061223 ↗
14. Strength, deformability and toughness of uncrosslinked fibrin fibers from theoretical reconstruction of stress-strain curves10.1016/j.actbio.2021.09.050 ↗
15. Fibrin fiber stiffness is strongly affected by fiber diameter, but not by fibrinogen glycation10.1016/j.bpj.2016.02.021 ↗
16. Multiscale characterization of the mechanical properties of fibrin and polyethylene glycol (PEG) hydrogels for tissue engineering applications10.1002/macp.202100366 ↗
17. The mechanical properties of fibrin for basic scientists and clinicians10.1016/j.bpc.2004.07.029 ↗
18. Structural origins of fibrin clot rheology10.1016/S0006-3495(99)77113-4 ↗
19. Rheology of fibrin clots. I. Dynamic viscoelastic properties and fluid permeation10.1016/0301-4622(74)80002-5 ↗
20. Strain-enhanced stress relaxation impacts nonlinear elasticity in collagen gels10.1073/pnas.1523906113 ↗
21. Studies on the strength of fibrinogen-thrombin clots
22. Viscoelastic properties of fibrin clots
23. The clotting of blood and fibrinogen-thrombin systems as studied by two dynamic instruments with large and small amplitudes
24. Dynamic viscoelastic study for the structure of fibrin networks in the clots of blood and plasma
25. The conversion of fibrinogen to fibrin. VII. Rigidity and stress relaxation of fibrin clots; effect of calcium10.1016/0003-9861(51)90021-5 ↗
26. Thrombin flux and wall shear rate regulate fibrin fiber deposition state during polymerization under flow10.1016/j.bpj.2009.12.4275 ↗
27. Fibrin architecture in clots: a quantitative polarized light microscopy analysis10.1016/j.bcmd.2008.10.014 ↗
28. Computational imaging analysis of glycated fibrin gels reveals aggregated and anisotropic structures10.1002/jbm.a.36074 ↗
29. Non-affine deformations in polymer hydrogels10.1039/c2sm25364j ↗
30. Multiscale mechanical simulations of cell compacted collagen gels10.1115/1.4024460 ↗
31. Initial fiber alignment pattern alters extracellular matrix synthesis in fibroblast-populated fibrin gel cruciforms and correlates with predicted tension10.1007/s10439-010-0192-2 ↗
32. A combined in vitro imaging and multi-scale modeling system for studying the role of cell matrix interactions in cutaneous wound healing10.1371/journal.pone.0148254 ↗
33. Remodeling of fibrous extracellular matrices by contractile cells: predictions from discrete fiber network simulations10.1016/j.bpj.2014.08.029 ↗
34. Strong triaxial coupling and anomalous Poisson effect in collagen networks10.1073/pnas.1815659116 ↗
35. Predicting the mechanical properties of biopolymer gels using neural networks trained on discrete fiber network data
36. Multiscale mechanobiology: Coupling models of adhesion kinetics and nonlinear tissue mechanics10.1016/j.bpj.2022.01.012 ↗
37. Design and validation of a modular micro-robotic system for the mechanical characterization of soft tissues10.1016/j.actbio.2021.07.035 ↗
38. Measurement of the force-displacement response of in vivo human skin under a rich set of deformations10.1016/j.medengphy.2010.12.017 ↗
39. Strain rate and anisotropy effects on the tensile failure characteristics of human skin10.1016/j.jmbbm.2014.10.006 ↗
40. Large amplitude oscillatory shear properties of human skin10.1016/j.jmbbm.2013.01.024 ↗
41. A validated software application to measure fiber organization in soft tissue10.1007/s10237-016-0776-3 ↗
42. A constrained von Mises distribution to describe fiber organization in thin soft tissues10.1007/s10237-011-0326-y ↗
43. A theory of finite viscoelasticity and numerical aspects10.1016/S0020-7683(97)00217-5 ↗
44. Modeling the anisotropic finite-deformation viscoelastic behavior of soft fiber-reinforced composites10.1016/j.ijsolstr.2007.06.020 ↗
45. Anisotropic finite strain viscoelasticity: constitutive modeling and finite element implementation10.1016/j.jmps.2018.09.014 ↗
46. Mechanism of fibrin(ogen) forced unfolding10.1016/j.str.2011.08.013 ↗
47. A homogenization approach for nonwoven materials based on fiber undulations and reorientation10.1016/j.jmps.2013.12.011 ↗
48. P. Knysh, Y. Korkolis, Blackbox: A procedure for parallel optimization of expensive black-box functions, ArXiv. (2016). 10.48550/arXiv.1605.00998
49. A comparison of the mechanical and structural properties of fibrin fibers with other protein fibers10.1007/s12013-007-9001-4 ↗
50. Fracture toughness of fibrin gels as a function of protein volume fraction: mechanical origins10.1016/j.actbio.2022.12.028 ↗
51. Flow profoundly influences fibrin network structure: implications for fibrin formation and clot stability in haemostasis10.1160/TH10-07-0442 ↗
52. Orientation behavior of fibers in concentrated suspensions10.1177/073168448400300201 ↗
53. Folgar–Tucker constant for a fibre suspension in a Newtonian fluid10.1016/S0377-0257(02)00006-X ↗
54. The swollen polymer network hypothesis: Quantitative models of hydrogel swelling, stiffness, and solute transport10.1016/j.progpolymsci.2020.101243 ↗
55. Affine versus non-affine fibril kinematics in collagen networks: theoretical studies of network behavior10.1115/1.2165699 ↗
56. A discrete network model to represent the deformation behavior of human amnion10.1016/j.jmbbm.2015.11.009 ↗
57. Finite element analysis of blood clots based on the nonlinear visco-hyperelastic model10.1016/j.bpj.2021.08.034 ↗
58. Investigating the mechanical behavior of clot analogues through experimental and computational analysis10.1007/s10439-020-02570-5 ↗
59. Nonlinear, dissipative phenomena in whole blood clot mechanics10.1039/D0SM01317J ↗