journal article·2025-07

Dual‐Mode Detection of RNA Demethylation Protein ALKBH3 Using a Two‐Legged DNA‐Walker‐Mediated BiOI/In 2 O 3 ‐Gated Organic Photoelectrochemical Transistor Biosensor

Yixin Hu, Yunlei Zhou, Huanshun Yin, Zhidong Yin, Tengjin Wang, Xingyu Liu, Xueyan Li, Zhe Chi

Small· Volume 21· Issue 27
Publisher page

Abstract

Abstract Organic photoelectrochemical transistor (OPECT) biosensors have emerged as prevalent candidates for bioanalytical technologies because of their intrinsic amplification properties and excellent detection performance. Herein, a novel OPECT biosensor for analyzing the RNA demethylation protein ALKBH3 is developed. A BiOI/In 2 O 3 type‐II heterojunction is employed as the photoactive material for the gate, and an organic semiconductor, poly(3,4‐ethylenedioxythiophene): poly(styrenesulfonic) (PEDOT:PSS), is used as the channel modification material. ALKBH3‐mediated RNA demethylation, as a switch, triggered the trans‐cleavage activity of the CRISPR‐Cas12a system, which subsequently leads to a failure in the formation of a bipedal DNA walker. Contrarily, ferrocenecarboxylic acid (FcA), which acts as an effective electron donor, cannot be captured, leading to modulation of the gating characteristics and degradation of the channel current response. Compared to the conventional photoelectrochemical method, the OPECT biosensor exhibits higher sensitivity and a lower detection limit for ALKBH3 protein, thereby facilitating the monitoring of ALKBH3 protein activity changes under the effect of environmental pollutants and demonstrating the crucial biomarker potential of ALKBH3 protein in evaluating its toxicological effects.
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Research context

OpenAlex topics: Fuel Cells and Related Materials · Advanced biosensing and bioanalysis techniques · RNA modifications and cancer

SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.

Affiliations

College of Chemistry and Material Science Shandong Agricultural University Tai'an Shandong 271018 P. R. China

Key Laboratory of Industrial Fermentation Microbiology of Ministry of Education & Tianjin Key Laboratory of Industrial Microbiology College of Biotechnology Tianjin University of Science and Technology Tianjin 300457 P. R. China

Key Laboratory of Marine Resource Chemistry and Food Technology of Ministry of Education College of Marine and Environmental Sciences Tianjin University of Science and Technology Tianjin 300457 P. R. China

College of Marine Life Sciences Ocean University of China Qingdao 266003 P. R. China

Funding

National Natural Science Foundation of China · Natural Science Foundation of Shandong Province

References (48)

Show source-provided references
1. 10.1002/adma.20240028710.1002/adma.202400287 ↗
2. 10.1002/adma.20240765410.1002/adma.202407654 ↗
3. 10.1002/adma.20240588710.1002/adma.202405887 ↗
4. 10.1016/j.esci.2025.10037410.1016/j.esci.2025.100374 ↗
5. 10.1016/j.bios.2022.11475210.1016/j.bios.2022.114752 ↗
6. 10.1007/s41664-018-0070-810.1007/s41664-018-0070-8 ↗
7. Wang H. · Anal. Chem. · 2024 · 96
8. 10.1016/j.bios.2020.11283210.1016/j.bios.2020.112832 ↗
9. 10.1016/j.snb.2022.13189610.1016/j.snb.2022.131896 ↗
10. 10.1021/acs.analchem.4c0106210.1021/acs.analchem.4c01062 ↗
11. 10.1016/j.snb.2024.13529110.1016/j.snb.2024.135291 ↗
12. 10.1016/j.talanta.2024.12608510.1016/j.talanta.2024.126085 ↗
13. 10.1021/acs.analchem.2c0385910.1021/acs.analchem.2c03859 ↗
14. 10.1002/adfm.20241100810.1002/adfm.202411008 ↗
15. 10.1002/adfm.20240818610.1002/adfm.202408186 ↗
16. 10.1016/j.envpol.2023.12294210.1016/j.envpol.2023.122942 ↗
17. 10.1016/j.cej.2021.13301510.1016/j.cej.2021.133015 ↗
18. 10.1039/D3TA04953A10.1039/D3TA04953A ↗
19. 10.1038/s41467-024-49004-710.1038/s41467-024-49004-7 ↗
20. 10.1016/j.cej.2022.13780410.1016/j.cej.2022.137804 ↗
21. 10.1002/advs.20241706710.1002/advs.202417067 ↗
22. Mohan M. · Nucleic Acids Res. · 2019 · 47
23. 10.1038/s41420-023-01458-210.1038/s41420-023-01458-2 ↗
24. 10.1186/s13578-024-01275-910.1186/s13578-024-01275-9 ↗
25. 10.1002/ctm2.181110.1002/ctm2.1811 ↗
26. 10.1002/adfm.20220273510.1002/adfm.202202735 ↗
27. 10.1021/acs.analchem.4c0136910.1021/acs.analchem.4c01369 ↗
28. 10.1002/adfm.20240449710.1002/adfm.202404497 ↗
29. 10.1002/admi.20210204010.1002/admi.202102040 ↗
30. 10.1016/j.bios.2021.11395810.1016/j.bios.2021.113958 ↗
31. 10.1016/j.bios.2024.11701110.1016/j.bios.2024.117011 ↗
32. 10.1039/D3SC00629H10.1039/D3SC00629H ↗
33. 10.1016/j.bios.2023.11583910.1016/j.bios.2023.115839 ↗
34. 10.1016/j.jhazmat.2024.13417510.1016/j.jhazmat.2024.134175 ↗
35. 10.1016/j.bios.2022.11501510.1016/j.bios.2022.115015 ↗
36. 10.1016/j.jece.2024.11301710.1016/j.jece.2024.113017 ↗
37. 10.1016/j.ijhydene.2024.09.17510.1016/j.ijhydene.2024.09.175 ↗
38. 10.1016/j.seppur.2024.12678610.1016/j.seppur.2024.126786 ↗
39. 10.1021/acs.analchem.3c0418310.1021/acs.analchem.3c04183 ↗
40. 10.1021/acs.analchem.4c0157710.1021/acs.analchem.4c01577 ↗
41. 10.1016/j.cej.2025.16054910.1016/j.cej.2025.160549 ↗
42. 10.1002/smll.20240571210.1002/smll.202405712 ↗
43. 10.1021/acs.analchem.3c0411110.1021/acs.analchem.3c04111 ↗
44. 10.1002/smll.20230636510.1002/smll.202306365 ↗
45. 10.1093/nar/gky125010.1093/nar/gky1250 ↗
46. 10.1038/nchembio.204010.1038/nchembio.2040 ↗
47. 10.1016/j.cej.2024.14911810.1016/j.cej.2024.149118 ↗
48. 10.1016/j.bios.2021.11358010.1016/j.bios.2021.113580 ↗