Nanophotonic trapping for precise manipulation of biomolecular arrays
Source abstract
Abstract
Optical trapping is a powerful manipulation and measurement technique widely used in the biological and materials sciences. Miniaturizing optical trap instruments onto optofluidic platforms holds promise for high-throughput lab-on-a-chip applications. However, a persistent challenge with existing optofluidic devices has been achieving controlled and precise manipulation of trapped particles. Here, we report a new class of on-chip optical trapping devices. Using photonic interference functionalities, an array of stable, three-dimensional on-chip optical traps is formed at the antinodes of a standing-wave evanescent field on a nanophotonic waveguide. By employing the thermo-optic effect via integrated electric microheaters, the traps can be repositioned at high speed (∼30 kHz) with nanometre precision. We demonstrate sorting and manipulation of individual DNA molecules. In conjunction with laminar flows and fluorescence, we also show precise control of the chemical environment of a sample with simultaneous monitoring. Such a controllable trapping device has the potential to achieve high-throughput precision measurements on chip.
Source: europepmc · Quality: candidate unverified · Source record ↗
Research context
OpenAlex topics: Orbital Angular Momentum in Optics · Microfluidic and Bio-sensing Technologies · Near-Field Optical Microscopy
SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.
References (35)
Show source-provided references
1. Chu, S. The manipulation of neutral particles. Rev. Mod. Phys. 70, 685–706 (1998).10.1103/RevModPhys.70.685 ↗
2. Forth, S., Sheinin, M., Inman, J. & Wang, M. Torque measurement at the single-molecule level. Annu. Rev. Biophys. 42, 583–604 (2013).10.1146/annurev-biophys-083012-130412 ↗
3. Moffitt, J. R., Chemla, Y. R., Smith, S. B. & Bustamante, C. Recent advances in optical tweezers. Annu. Rev. Biochem. 77, 205–228 (2008).10.1146/annurev.biochem.77.043007.090225 ↗
4. Hilario, J. & Kowalczykowski, S. C. Visualizing protein–DNA interactions at the single-molecule level. Curr. Opin. Chem. Biol. 14, 15–22 (2010).10.1016/j.cbpa.2009.10.035 ↗
5. Dholakia, K. & Cizmar, T. Shaping the future of manipulation. Nature Photon. 5, 335–342 (2011).10.1038/nphoton.2011.80 ↗
6. Padgett, M. & Bowman, R. Tweezers with a twist. Nature Photon. 5, 343–348 (2011).10.1038/nphoton.2011.81 ↗
7. Jannasch, A., Demirors, A. F., van Oostrum, P. D. J., van Blaaderen, A. & Schaffer, E. Nanonewton optical force trap employing anti-reflection coated, high-refractive-index titania microspheres. Nature Photon. 6, 469–473 (2012).10.1038/nphoton.2012.140 ↗
8. Grier, D. G. A revolution in optical manipulation. Nature 424, 810–816 (2003).10.1038/nature01935 ↗
9. Fainman, Y., Psaltis, D. & Yang, C. Optofluidics: Fundamentals, Devices, and Applications Ch. 17, (McGraw-Hill, 2010).
10. Erickson, D., Serey, X., Chen, Y. F. & Mandal, S. Nanomanipulation using near field photonics. Lab on a Chip 11, 995–1009 (2011).10.1039/c0lc00482k ↗
11. Erickson, D., Rockwood, T., Emery, T., Scherer, A. & Psaltis, D. Nanofluidic tuning of photonic crystal circuits. Opt. Lett. 31, 59–61 (2006).10.1364/OL.31.000059 ↗
12. Diehl, L. et al. Microfluidic tuning of distributed feedback quantum cascade lasers. Opt. Express 14, 11660–11667 (2006).10.1364/OE.14.011660 ↗
13. Psaltis, D., Quake, S. R. & Yang, C. Developing optofluidic technology through the fusion of microfluidics and optics. Nature 442, 381–386 (2006).10.1038/nature05060 ↗
14. Juan, M. L., Righini, M. & Quidant, R. Plasmon nano-optical tweezers. Nature Photon. 5, 349–356 (2011).10.1038/nphoton.2011.56 ↗
15. Schmidt, H. & Hawkins, A. R. The photonic integration of non-solid media using optofluidics. Nature Photon. 5, 598–604 (2011).10.1038/nphoton.2011.163 ↗
16. Fan, X. D. & White, I. M. Optofluidic microsystems for chemical and biological analysis. Nature Photon. 5, 591–597 (2011).10.1038/nphoton.2011.206 ↗
17. Molloy, J. E., Burns, J. E., Kendrick-Jones, J., Tregear, R. T. & White, D. C. Movement and force produced by a single myosin head. Nature 378, 209–112 (1995).10.1038/378209a0 ↗
18. Farre, A., van der Horst, A., Blab, G. A., Downing, B. P. B. & Forde, N. R. Stretching single DNA molecules to demonstrate high-force capabilities of holographic optical tweezers. J. Biophoton. 3, 224–233 (2010).10.1002/jbio.200900107 ↗
19. Yang, A. H. J. et al. Optical manipulation of nanoparticles and biomolecules in sub-wavelength slot waveguides. Nature 457, 71–75 (2009).10.1038/nature07593 ↗
20. Lin, S. Y. & Crozier, K. B. Planar silicon microrings as wavelength-multiplexed optical traps for storing and sensing particles. Lab on a Chip 11, 4047–4051 (2011).10.1039/c1lc20574a ↗
21. Lin, S. Y. & Crozier, K. B. An integrated microparticle sorting system based on near-field optical forces and a structural perturbation. Opt. Express 20, 3367–3374 (2012).10.1364/OE.20.003367 ↗
22. Schmidt, B. S., Yang, A. H. J., Erickson, D. & Lipson, M. Optofluidic trapping and transport on solid core waveguides within a microfluidic device. Opt. Express 15, 14322–14334 (2007).10.1364/OE.15.014322 ↗
23. Mandal, S., Serey, X. & Erickson, D. Nanomanipulation using silicon photonic crystal resonators. Nano Lett. 10, 99–104 (2010).10.1021/nl9029225 ↗
24. Renaut, C. et al. On chip shapeable optical tweezers. Sci. Rep. 3, 2290–2293 (2013).10.1038/srep02290 ↗
25. Jaquay, E., Martinez, L. J., Mejia, C. A. & Povinelli, M. L. Light-assisted, templated self-assembly using a photonic-crystal slab. Nano Lett. 13, 2290–2294 (2013).10.1021/nl400918x ↗
26. Lei, T. & Poon, A. W. Silicon-on-insulator multimode-interference waveguide-based arrayed optical tweezers (SMART) for two-dimensional microparticle trapping and manipulation. Opt. Express 21, 1520–1530 (2013).10.1364/OE.21.001520 ↗
27. Soltani, M., Inman, J. T., Lipson, M. & Wang, M. D. Electro-optofluidics: achieving dynamic control on-chip. Opt. Express 20, 22314–22326 (2012).10.1364/OE.20.022314 ↗
28. Atabaki, A. H., Hosseini, E. S., Eftekhar, A. A., Yegnanarayanan, S. & Adibi, A. Optimization of metallic microheaters for high-speed reconfigurable silicon photonics. Opt. Express 18, 18312–18323 (2010).10.1364/OE.18.018312 ↗
29. Moffitt, J. R., Chemla, Y. R., Izhaky, D. & Bustamante, C. Differential detection of dual traps improves the spatial resolution of optical tweezers. Proc. Natl Acad. Sci. USA 103, 9006–9011 (2006).10.1073/pnas.0603342103 ↗
30. Abbondanzieri, E. A., Greenleaf, W. J., Shaevitz, J. W., Landick, R. & Block, S. M. Direct observation of base-pair stepping by RNA polymerase. Nature 438, 460–465 (2005).10.1038/nature04268 ↗
31. Sun, B. et al. ATP-induced helicase slippage reveals highly coordinated subunits. Nature 478, 132–135 (2011).10.1038/nature10409 ↗
32. Forget, A. L., Dombrowski, C. C., Amitani, I. & Kowalczykowski, S. C. Exploring protein–DNA interactions in 3D using in situ construction, manipulation and visualization of individual DNA dumbbells with optical traps, microfluidics and fluorescence microscopy. Nature Protoc. 8, 525–538 (2013).10.1038/nprot.2013.016 ↗
33. Gelles, J., Schnapp, B. J. & Sheetz, M. P. Tracking kinesin-driven movements with nanometre-scale precision. Nature 331, 450–453 (1988).10.1038/331450a0 ↗
34. Fuller, D. N. et al. A general method for manipulating DNA sequences from any organism with optical tweezers. Nucleic Acids Res. 34, e15–e24 (2006).10.1093/nar/gnj016 ↗
35. Laib, S., Robertson, R. M. & Smith, D. E. Preparation and characterization of a set of linear DNA molecules for polymer physics and rheology studies. Macromolecules 39, 4115–4119 (2006).10.1021/ma0601464 ↗