journal article·2018Open access

Bioelectronics communication: encoding yeast regulatory responses using nanostructured gallium nitride thin films

Patrick J. Snyder, Dennis R. LaJeunesse, Pramod Reddy, Ronny Kirste, Ramon Collazo, Albena Ivanisevic

Nanoscale· Volume 10· Issue 24

Abstract

Baker's yeast, S. cerevisiae, is a model organism that is used in synthetic biology. The work demonstrates how GaN nanostructured thin films can encode physiological responses in S. cerevisiae yeast. The Ga-polar, n-type, GaN thin films are characterized via Photocurrent Measurements, Atomic Force Microscopy and Kelvin Probe Force Microscopy. UV light is used to induce persistent photoconductivity that results in charge accumulation on the surface. The morphological, chemical and electronic properties of the nanostructured films are utilized to activate the cell wall integrity pathway and alter the amount of chitin produced by the yeast. The encoded cell responses are induced by the semiconductor interfacial properties associated with nanoscale topography and the accumulation of charge on the surface that promotes the build-up of oxygen species and in turn cause a hyperoxia related change in the yeast. The thin films can also alter the membrane voltage of yeast. The observed modulation of the membrane voltage of the yeast exposed to different GaN samples supports the notion that the semiconductor material can cause cell polarization. The results thus define a strategy for bioelectronics communication where the roughness, surface chemistry and charge of the wide band gap semiconductor's thin film surface initiate the encoding of the yeast response.
Source: openalex_inverted_index · Quality: candidate unverified · Source record ↗

Research context

OpenAlex topics: Molecular Communication and Nanonetworks · Advanced biosensing and bioanalysis techniques · Molecular Junctions and Nanostructures

SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.

Affiliations

Department of Materials Science and Engineering

North Carolina State University

Raleigh

USA

Joint School of Nanoscience and Nanoengineering

University of North Carolina

Greensboro

North Carolina A&T University

Adroit Materials

Cary

Funding

Army Research Office · National Science Foundation · National Institutes of Health

References (57)

Show source-provided references
1. Wang · IEEE-CAA J. Autom. Sinica · 2018 · 5 · 310.1109/JAS.2017.7510727 ↗
2. Unluturk · IEEE Trans. Nanobioscience · 2017 · 16 · 28710.1109/TNB.2017.2706757 ↗
3. Zhang · Chem. Rev. · 2016 · 116 · 21510.1021/acs.chemrev.5b00608 ↗
4. Simon · Chem. Rev. · 2016 · 116 · 1300910.1021/acs.chemrev.6b00146 ↗
5. Malvankar · ChemSusChem · 2012 · 5 · 103910.1002/cssc.201100733 ↗
6. Ngandu Mpoyi · ACS Nano · 2016 · 10 · 663810.1021/acsnano.6b01649 ↗
7. Ye · Nano Lett. · 2015 · 15 · 472010.1021/acs.nanolett.5b01619 ↗
8. Medvedeva · Adv. Electron. Mater. · 2017 · 3 · 170008210.1002/aelm.201700082 ↗
9. Thissen · Prog. Surf. Sci. · 2012 · 87 · 27210.1016/j.progsurf.2012.10.003 ↗
10. Pearce · J. Mater. Res. · 2015 · 30 · 285910.1557/jmr.2015.132 ↗
11. Paniagua · Chem. Rev. · 2016 · 116 · 711710.1021/acs.chemrev.6b00061 ↗
12. Qin · Materials · 2017 · 10 · 141910.3390/ma10121419 ↗
13. Li · Nanoscale · 2017 · 9 · 732010.1039/C7NR01577A ↗
14. R. Kirste , N.Rohrbaugh , I.Bryan , Z.Bryan , R.Collazo and A.Ivanisevic , Electronic Biosensors Based on III-Nitride Semiconductors , in Annual Review of Analytical Chemistry , ed. R. G. Cooks and J. E. Pemberton , Annual Review of Analytical Chemistry; Annual Reviews: 4139 El Camino Way, PO Box 10139, Palo Alto, CA 94303-0897, USA, 2015 , vol. 8, pp. 149–169
15. Kaess · J. Appl. Phys. · 2016 · 120 · 10570110.1063/1.4962017 ↗
16. Mita · J. Appl. Phys. · 2008 · 104 · 1352110.1063/1.2952027 ↗
17. Romano · J. Appl. Phys. · 2000 · 87 · 774510.1063/1.373529 ↗
18. Bao · Nanoscale Res. Lett. · 2011 · 6 · 40410.1186/1556-276X-6-404 ↗
19. Snyder · Small · 2017 · 13 · 170048110.1002/smll.201700481 ↗
20. Snyder · ACS Omega · 2018 · 3 · 61510.1021/acsomega.7b01894 ↗
21. Melby · ACS Nano · 2017 · 11 · 548910.1021/acsnano.7b00231 ↗
22. Deng · ACS Nano · 2017 · 11 · 828210.1021/acsnano.7b03449 ↗
23. Xu · Appl. Surf. Sci. · 2008 · 254 · 191510.1016/j.apsusc.2007.07.189 ↗
24. Snyder · RSC Adv. · 2016 · 6 · 9787310.1039/C6RA21936E ↗
25. Marchesano · ACS Appl. Mater. Interfaces · 2015 · 7 · 1811310.1021/acsami.5b05340 ↗
26. Mandal · ACS Omega · 2017 · 2 · 727510.1021/acsomega.7b01069 ↗
27. Lao · Nano Lett. · 2007 · 7 · 132310.1021/nl070359m ↗
28. Wilkins · ChemPhysChem · 2015 · 16 · 168710.1002/cphc.201500105 ↗
29. Hotchkiss · Acc. Chem. Res. · 2012 · 45 · 33710.1021/ar200119g ↗
30. Bera · ACS Appl. Mater. Interfaces · 2009 · 1 · 206610.1021/am900422y ↗
31. Spori · Langmuir · 2007 · 23 · 805310.1021/la700474v ↗
32. Bayan · Mater. Sci. Semicond. Process. · 2014 · 24 · 20010.1016/j.mssp.2014.03.039 ↗
33. Reynolds · Eukaryotic Cell · 2008 · 7 · 12210.1128/EC.00310-06 ↗
34. Reynolds · Science · 2001 · 291 · 87810.1126/science.291.5505.878 ↗
35. S. J. Free , Fungal Cell Wall Organization and Biosynthesis , in Advances in Genetics , ed. T. Friedmann , J. C. Dunlap and S. F. Goodwin , 2013 , vol. 81 , pp. 33–82
36. Dichtl · Cell. Microbiol. · 2016 · 18 · 122810.1111/cmi.12612 ↗
37. Levin · Genetics · 2011 · 189 · 114510.1534/genetics.111.128264 ↗
38. Outten · Biochem. J. · 2005 · 388 · 9310.1042/BJ20041914 ↗
39. Causton · Mol. Biol. Cell · 2001 · 12 · 32310.1091/mbc.12.2.323 ↗
40. Van Zandycke · J. Am. Soc. Brew. Chem. · 2003 · 61 · 15
41. Adams · Development · 2007 · 134 · 132310.1242/dev.02812 ↗
42. Haupt · PLoS Biol. · 2014 · 12 · e100202910.1371/journal.pbio.1002029 ↗
43. Plasek · J. Bioenerg. Biomembr. · 2012 · 44 · 55910.1007/s10863-012-9458-8 ↗
44. Jost · ACS Synth. Biol. · 2015 · 4 · 107710.1021/acssynbio.5b00053 ↗
45. Sylvie · FEBS Lett. · 2011 · 585 · 114010.1016/j.febslet.2011.03.022 ↗
46. Miceli · Front. Genet. · 2012 · 2 · 10210.3389/fgene.2011.00102 ↗
47. Murray · Biochim. Biophys. Acta, Gen. Subj. · 2011 · 1810 · 94510.1016/j.bbagen.2011.04.005 ↗
48. Fedoseeva · Sci. Rep. · 2017 · 7 · 258610.1038/s41598-017-02736-7 ↗
49. Zhang · Electron. J. Biotechnol. · 2015 · 18 · 20210.1016/j.ejbt.2015.03.008 ↗
50. Pyatrikas · FEMS Microbiol. Lett. · 2015 · 362 · fnv08210.1093/femsle/fnv082 ↗
51. Kaur · J. Hazard. Mater. · 2007 · 141 · 23010.1016/j.jhazmat.2006.06.123 ↗
52. Wu · Dyes Pigm. · 2008 · 77 · 3110.1016/j.dyepig.2007.03.003 ↗
53. Li · J. Mater. Chem. B · 2018 · 6 · 145810.1039/C7TB03242K ↗
54. Slavin · J. Nanobiotechnol. · 2017 · 15 · 6510.1186/s12951-017-0308-z ↗
55. Foster · Langmuir · 2013 · 29 · 21610.1021/la304039n ↗
56. Zhang · Sci. Rep. · 2016 · 6 · 2483910.1038/srep24839 ↗
57. L. W. Bergman , Growth and Maintenance of Yeast , in Two-Hybrid Systems: Methods and Protocols , ed. P. N. MacDonald , Humana Press , Totowa, NJ , 2001 , pp. 9–14