journal article·2024-09-04

Antisense Oligonucleotide Embedded Context Responsive Nanoparticles Derived from Synthetic Ionizable Lipids for lncRNA Targeted Therapy of Breast Cancer

Sourav Sarkar, Parikshit Moitra, Sayan Bera, Santanu Bhattacharya

ACS Applied Materials & Interfaces· Volume 16· Issue 35
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Abstract

The long noncoding RNAs (lncRNA) are primarily associated with several essential gene regulations but are also connected to cancer metabolism and progression. HOTAIR and MALAT1 are two such lncRNAs that are detected in malignancies of various origins and are responsible for the poor prognosis of cancer patients. Due to these factors, the lncRNAs have emerged as prime targets for the development of anticancer therapeutics. However, nonviral delivery of lncRNA-targeted antisense oligonucleotides (ASOs) still remains a critical challenge while maintaining their structural and functional integrity. Herein, we have designed and synthesized a new series of ionizable lipids with variations in their head groups to prepare lipid nanoparticle (LNP) formulation along with cholesterol-based twin cationic lipid and amphiphilic zwitterionic lipid. The context responsiveness of these formulations in delivering the ASOs has been thoroughly investigated by various bioanalytical techniques, and an optimum formulation has been identified. The LNPs are utilized to deliver the ASOs targeting HOTAIR lncRNA in human cancer cell lines and MALAT1 lncRNA in mouse models. This study thus standardizes an advanced nanomaterial system for nonviral gene delivery that has been validated by a considerable reduction in the target lncRNA level under in vitro and a significant reduction in tumor volume under in vivo settings.
Source: openalex_inverted_index · Quality: baseline

Research context

OpenAlex topics: Cancer-related molecular mechanisms research · MicroRNA in disease regulation · Circular RNAs in diseases

SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.

Affiliations

School of Applied & Interdisciplinary Sciences, Indian Association for the Cultivation of Science, Kolkata 700032, India

Department of Chemical Sciences, Indian Institute of Science Education and Research Berhampur (IISER Berhampur), Berhampur, Odisha 760003, India

Technical Research Centre, Indian Association for the Cultivation of Science, Kolkata 700032, India

Department of Organic Chemistry, Indian Institute of Science, Bangalore 560012, India

Department of Chemistry, Indian Institute of Science Education and Research Tirupati (IISER Tirupati), Srinivasapuram, Yerpedu Mandal, Tirupati District, Andhra Pradesh 517619, India

Funding

Science and Engineering Research Board · Department of Science and Technology, Ministry of Science and Technology, India

References (68)

Show source-provided references
1. 10.1038/s41573-019-0017-410.1038/s41573-019-0017-4 ↗
2. 10.1016/j.addr.2007.03.00510.1016/j.addr.2007.03.005 ↗
3. 10.1146/annurev-pharmtox-010715-10363310.1146/annurev-pharmtox-010715-103633 ↗
4. 10.1038/442882a10.1038/442882a ↗
5. 10.1016/S1672-0229(08)60044-310.1016/S1672-0229(08)60044-3 ↗
6. 10.1016/j.jpha.2019.05.00410.1016/j.jpha.2019.05.004 ↗
7. 10.1016/j.drudis.2016.10.01410.1016/j.drudis.2016.10.014 ↗
8. 10.1021/acsami.3c1062010.1021/acsami.3c10620 ↗
9. 10.1007/978-1-60761-657-3_1010.1007/978-1-60761-657-3_10 ↗
10. 10.1016/j.jmb.2013.01.02210.1016/j.jmb.2013.01.022 ↗
11. 10.1016/j.jconrel.2022.10.05010.1016/j.jconrel.2022.10.050 ↗
12. 10.1126/sciadv.aat338610.1126/sciadv.aat3386 ↗
13. 10.1111/j.1440-1681.2006.04403.x10.1111/j.1440-1681.2006.04403.x ↗
14. 10.1016/j.bbagrm.2014.08.01210.1016/j.bbagrm.2014.08.012 ↗
15. 10.1007/978-1-4939-3378-5_2110.1007/978-1-4939-3378-5_21 ↗
16. 10.1111/febs.1587610.1111/febs.15876 ↗
17. 10.1016/j.bbcan.2015.07.00110.1016/j.bbcan.2015.07.001 ↗
18. 10.1016/j.cca.2019.12.02810.1016/j.cca.2019.12.028 ↗
19. 10.1038/onc.2015.34010.1038/onc.2015.340 ↗
20. 10.7497/j.issn.2095-3941.2015.000610.7497/j.issn.2095-3941.2015.0006 ↗
21. 10.3390/ncrna602002210.3390/ncrna6020022 ↗
22. 10.3390/cancers1102021610.3390/cancers11020216 ↗
23. 10.1101/gad.270959.11510.1101/gad.270959.115 ↗
24. 10.1016/j.bbcan.2021.18850210.1016/j.bbcan.2021.188502 ↗
25. 10.1021/jm061125310.1021/jm0611253 ↗
26. 10.1016/j.bbamem.2007.12.01010.1016/j.bbamem.2007.12.010 ↗
27. 10.1021/acsami.9b0948510.1021/acsami.9b09485 ↗
28. 10.1021/acsami.3c1471410.1021/acsami.3c14714 ↗
29. 10.1021/acsami.4c0099210.1021/acsami.4c00992 ↗
30. 10.1016/j.biomaterials.2013.10.06210.1016/j.biomaterials.2013.10.062 ↗
31. 10.1039/C7CC03320F10.1039/C7CC03320F ↗
32. 10.1021/bc070010q10.1021/bc070010q ↗
33. 10.1007/s11095-022-03460-210.1007/s11095-022-03460-2 ↗
34. 10.1002/ange.20120326310.1002/ange.201203263 ↗
35. 10.1038/s41563-020-00886-010.1038/s41563-020-00886-0 ↗
36. 10.1021/bi971772j10.1021/bi971772j ↗
37. 10.1038/s41419-020-02820-310.1038/s41419-020-02820-3 ↗
38. 10.1126/science.aba462410.1126/science.aba4624 ↗
39. 10.1016/j.celrep.2012.06.00310.1016/j.celrep.2012.06.003 ↗
40. 10.1021/la00012a02810.1021/la00012a028 ↗
41. 10.1039/D3TB01841E10.1039/D3TB01841E ↗
42. 10.1002/adfm.20221256910.1002/adfm.202212569 ↗
43. 10.1016/j.bios.2022.11417810.1016/j.bios.2022.114178 ↗
44. 10.1002/adhm.20230271210.1002/adhm.202302712 ↗
45. 10.1186/s12935-022-02801-w10.1186/s12935-022-02801-w ↗
46. 10.1186/s12885-018-4576-210.1186/s12885-018-4576-2 ↗
47. 10.1007/s13277-013-0963-010.1007/s13277-013-0963-0 ↗
48. 10.1007/978-1-61779-207-6_810.1007/978-1-61779-207-6_8 ↗
49. 10.1038/srep1910310.1038/srep19103 ↗
50. 10.1016/S0304-3835(98)00198-010.1016/S0304-3835(98)00198-0 ↗
51. 10.1039/D2SC00260D10.1039/D2SC00260D ↗
52. 10.1021/acsbiomaterials.1c0011010.1021/acsbiomaterials.1c00110 ↗
53. 10.1021/acsnano.4c0140010.1021/acsnano.4c01400 ↗
54. 10.1002/adhm.20227011310.1002/adhm.202270113 ↗
55. 10.1038/srep0710710.1038/srep07107 ↗
56. 10.1093/nar/16.24.1169110.1093/nar/16.24.11691 ↗
57. Dias N. · Molecular cancer therapeutics · 2002 · 1 · 347
58. 10.1093/nar/gkx06010.1093/nar/gkx060 ↗
59. 10.1007/s13277-014-2523-710.1007/s13277-014-2523-7 ↗
60. 10.1038/nature0897510.1038/nature08975 ↗
61. 10.3389/fbioe.2016.0001210.3389/fbioe.2016.00012 ↗
62. 10.1038/sdata.2017.17010.1038/sdata.2017.170 ↗
63. 10.7554/eLife.7912610.7554/eLife.79126 ↗
64. 10.1016/j.molcel.2015.03.00610.1016/j.molcel.2015.03.006 ↗
65. 10.1186/s10020-018-0050-510.1186/s10020-018-0050-5 ↗
66. 10.26355/eurrev_202002_2036310.26355/eurrev_202002_20363 ↗
67. 10.1186/s12951-020-00604-710.1186/s12951-020-00604-7 ↗
68. 10.1111/j.1365-2613.2007.00539.x10.1111/j.1365-2613.2007.00539.x ↗