journal article·2024-07-31

AI-Powered Microfluidics: Shaping the Future of Phenotypic Drug Discovery

Junchi Liu, Hanze Du, Lei Huang, Wangni Xie, Kexuan Liu, Xue Zhang, Shi Chen, Yuan Zhang, Daowei Li, Hui Pan

ACS Applied Materials & Interfaces· Volume 16· Issue 30
Publisher page

Abstract

Phenotypic drug discovery (PDD), which involves harnessing biological systems directly to uncover effective drugs, has undergone a resurgence in recent years. The rapid advancement of artificial intelligence (AI) over the past few years presents numerous opportunities for augmenting phenotypic drug screening on microfluidic platforms, leveraging its predictive capabilities, data analysis, efficient data processing, etc. Microfluidics coupled with AI is poised to revolutionize the landscape of phenotypic drug discovery. By integrating advanced microfluidic platforms with AI algorithms, researchers can rapidly screen large libraries of compounds, identify novel drug candidates, and elucidate complex biological pathways with unprecedented speed and efficiency. This review provides an overview of recent advances and challenges in AI-based microfluidics and their applications in drug discovery. We discuss the synergistic combination of microfluidic systems for high-throughput screening and AI-driven analysis for phenotype characterization, drug-target interactions, and predictive modeling. In addition, we highlight the potential of AI-powered microfluidics to achieve an automated drug screening system. Overall, AI-powered microfluidics represents a promising approach to shaping the future of phenotypic drug discovery by enabling rapid, cost-effective, and accurate identification of therapeutically relevant compounds.
Source: openalex_inverted_index · Quality: baseline

Research context

OpenAlex topics: Innovative Microfluidic and Catalytic Techniques Innovation · 3D Printing in Biomedical Research · Cell Image Analysis Techniques

SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.

Affiliations

Department of Anesthesiology, The First Hospital of Jilin University, 71 Xinmin Street, Changchun 130012, China

Department of Endocrinology, Key Laboratory of Endocrinology of National Health Commission, Translation Medicine Centre, Peking Union Medical College Hospital, Peking Union Medical College, Chinese Academy of Medical Sciences, Beijing 100730, China

Key Laboratory of Endocrinology of National Health Commission, Department of Endocrinology, State Key Laboratory of Complex Severe and Rare Diseases, Peking Union Medical College Hospital, Chinese Academy of Medical Science and Peking Union Medical College, Beijing 100730, China

Jilin Provincial Key Laboratory of Tooth Development and Bone Remodeling, School and Hospital of Stomatology, Jilin University, 1500 Qinghua Road, Changchun 130012, China

Funding

National Key Research and Development Program of China · China Postdoctoral Science Foundation · Changchun Science and Technology Bureau · Jilin Province Development and Reform Commission · National Natural Science Foundation of China

References (100+)

Show source-provided references
1. 10.1089/adt.2017.79610.1089/adt.2017.796 ↗
2. 10.1038/s41573-022-00472-w10.1038/s41573-022-00472-w ↗
3. 10.1038/nrd348010.1038/nrd3480 ↗
4. 10.1016/j.chembiol.2021.02.01110.1016/j.chembiol.2021.02.011 ↗
5. 10.1038/nature0505810.1038/nature05058 ↗
6. 10.3390/bios1201002010.3390/bios12010020 ↗
7. 10.1007/s00253-022-11797-210.1007/s00253-022-11797-2 ↗
8. 10.3390/s2107229010.3390/s21072290 ↗
9. 10.1016/j.bios.2019.11159710.1016/j.bios.2019.111597 ↗
10. 10.1016/j.snb.2007.07.14510.1016/j.snb.2007.07.145 ↗
11. 10.3390/inventions303006010.3390/inventions3030060 ↗
12. 10.1016/j.tcb.2016.03.00810.1016/j.tcb.2016.03.008 ↗
13. 10.1016/j.drudis.2020.07.02410.1016/j.drudis.2020.07.024 ↗
14. 10.1111/cts.1343110.1111/cts.13431 ↗
15. 10.1055/s-0039-167790110.1055/s-0039-1677901 ↗
16. Pereira T. · 2021 · 9 · 827
17. 10.1016/j.jbef.2021.10057710.1016/j.jbef.2021.100577 ↗
18. 10.1631/FITEE.160188510.1631/FITEE.1601885 ↗
19. 10.1002/itl2.16910.1002/itl2.169 ↗
20. 10.1039/D2LC00468B10.1039/D2LC00468B ↗
21. 10.1021/ac301966c10.1021/ac301966c ↗
22. 10.1021/acssensors.5b0022110.1021/acssensors.5b00221 ↗
23. 10.1002/smll.20170361710.1002/smll.201703617 ↗
24. 10.1016/j.jsamd.2021.02.00910.1016/j.jsamd.2021.02.009 ↗
25. 10.3390/mi1105049310.3390/mi11050493 ↗
26. 10.3390/nano1004066810.3390/nano10040668 ↗
27. 10.1002/smll.20220719410.1002/smll.202207194 ↗
28. 10.1021/acssensors.9b0220510.1021/acssensors.9b02205 ↗
29. 10.3390/bios1211096310.3390/bios12110963 ↗
30. 10.1038/s41598-017-01013-x10.1038/s41598-017-01013-x ↗
31. 10.1039/D0AN00110D10.1039/D0AN00110D ↗
32. 10.1517/17460441.2016.116520310.1517/17460441.2016.1165203 ↗
33. 10.3390/antiox1001010610.3390/antiox10010106 ↗
34. 10.1073/pnas.091078110710.1073/pnas.0910781107 ↗
35. 10.3389/fnano.2023.126449810.3389/fnano.2023.1264498 ↗
36. 10.1039/C7LC00509A10.1039/C7LC00509A ↗
37. 10.1039/D1LC00740H10.1039/D1LC00740H ↗
38. Collins S. D. · 2019
39. 10.5114/aoms.2016.6374310.5114/aoms.2016.63743 ↗
40. 10.1088/1758-5090/7/3/03100210.1088/1758-5090/7/3/031002 ↗
41. 10.1517/14712598.2012.70718110.1517/14712598.2012.707181 ↗
42. 10.1007/s00253-014-6253-y10.1007/s00253-014-6253-y ↗
43. 10.3791/82510.3791/825 ↗
44. 10.1002/adhm.20150074410.1002/adhm.201500744 ↗
45. 10.1016/j.stemcr.2022.03.01210.1016/j.stemcr.2022.03.012 ↗
46. 10.1002/adfm.20180195410.1002/adfm.201801954 ↗
47. 10.1038/s41467-020-19058-410.1038/s41467-020-19058-4 ↗
48. 10.1039/D1LC00348H10.1039/D1LC00348H ↗
49. 10.1038/s41598-022-22439-y10.1038/s41598-022-22439-y ↗
50. 10.1038/s41598-023-32334-910.1038/s41598-023-32334-9 ↗
51. 10.1038/s41598-021-92011-710.1038/s41598-021-92011-7 ↗
52. 10.3390/cells1204057610.3390/cells12040576 ↗
53. 10.1016/j.neuint.2018.08.01210.1016/j.neuint.2018.08.012 ↗
54. 10.1007/s00204-016-1689-810.1007/s00204-016-1689-8 ↗
55. 10.1038/s43586-022-00118-610.1038/s43586-022-00118-6 ↗
56. 10.3389/fbioe.2022.84869910.3389/fbioe.2022.848699 ↗
57. 10.1002/adma.20210897210.1002/adma.202108972 ↗
58. 10.1002/advs.20200292810.1002/advs.202002928 ↗
59. 10.1038/nmeth.369710.1038/nmeth.3697 ↗
60. 10.1126/scitranslmed.300424910.1126/scitranslmed.3004249 ↗
61. 10.1016/j.jcf.2021.10.00410.1016/j.jcf.2021.10.004 ↗
62. 10.1007/s10544-019-0423-810.1007/s10544-019-0423-8 ↗
63. 10.3390/pharmaceutics1205046410.3390/pharmaceutics12050464 ↗
64. 10.1039/C6LC00184J10.1039/C6LC00184J ↗
65. 10.1016/j.biomaterials.2018.09.00710.1016/j.biomaterials.2018.09.007 ↗
66. 10.1016/j.jcyt.2020.07.00410.1016/j.jcyt.2020.07.004 ↗
67. 10.1093/humrep/deaa05710.1093/humrep/deaa057 ↗
68. 10.1002/adbi.20200007910.1002/adbi.202000079 ↗
69. 10.1002/advs.20200032310.1002/advs.202000323 ↗
70. 10.1016/j.drudis.2019.08.00110.1016/j.drudis.2019.08.001 ↗
71. 10.1038/s41598-020-61247-010.1038/s41598-020-61247-0 ↗
72. 10.1302/2046-3758.128.BJR-2023-019910.1302/2046-3758.128.BJR-2023-0199 ↗
73. 10.1016/j.drudis.2018.11.01410.1016/j.drudis.2018.11.014 ↗
74. 10.1126/science.aaa841510.1126/science.aaa8415 ↗
75. 10.1038/s41585-019-0193-310.1038/s41585-019-0193-3 ↗
76. Xu, N. Understanding the Reinforcement Learning. In3rd International Conference on Control Engineering and Artificial Intelligence (CCEAI), Los Angeles, CA, Jan 24–26, 2019; Vol. 1207. 10.1088/1742-6596/1207/1/012014.10.1088/1742-6596/1207/1/012014 ↗
77. 10.1148/rg.201716013010.1148/rg.2017160130 ↗
78. 10.1016/j.media.2022.10269110.1016/j.media.2022.102691 ↗
79. 10.1038/icb.2017.1610.1038/icb.2017.16 ↗
80. 10.1007/s10489-021-02439-710.1007/s10489-021-02439-7 ↗
81. Eick, C. F.; Zeidat, N.; Zhao, Z. H. Supervised clustering - Algorithms and benefits. In16th IEEE International Conference on Tools with Artificial Intelligence, Boca Raton, FL, Nov 15–17, 2004; pp 774–776.10.1109/ICTAI.2004.111 ↗
82. 10.3389/fncom.2019.0003110.3389/fncom.2019.00031 ↗
83. 10.3389/fonc.2022.96098410.3389/fonc.2022.960984 ↗
84. 10.1111/joim.1282210.1111/joim.12822 ↗
85. 10.1007/s10994-019-05855-610.1007/s10994-019-05855-6 ↗
86. 10.1016/j.neunet.2021.10.00310.1016/j.neunet.2021.10.003 ↗
87. 10.1016/j.simpat.2004.12.00310.1016/j.simpat.2004.12.003 ↗
88. 10.1021/acs.molpharmaceut.6b0024810.1021/acs.molpharmaceut.6b00248 ↗
89. 10.1093/bib/bbab35510.1093/bib/bbab355 ↗
90. 10.1016/j.ebiom.2017.12.02610.1016/j.ebiom.2017.12.026 ↗
91. 10.1038/nature1453910.1038/nature14539 ↗
92. 10.1007/s11604-018-0726-310.1007/s11604-018-0726-3 ↗
93. 10.1016/j.bspc.2023.10563010.1016/j.bspc.2023.105630 ↗
94. He, K.; Zhang, X.; Ren, S.; Sun, J.Identity Mappings in Deep Residual Networks; Springer International Publishing: Cham, 2016; pp 630–645.10.1007/978-3-319-46493-0_38 ↗
95. 10.1145/306538610.1145/3065386 ↗
96. 10.1016/j.jocs.2018.11.00810.1016/j.jocs.2018.11.008 ↗
97. Iandola, F. N.; Han, S.; Moskewicz, M. W.; Ashraf, K.; Dally, W. J.; Keutzer, K. SqueezeNet: AlexNet-level accuracy with 50x fewer parameters and < 0.5 MB model size.arXiv, February 24, 2016. 10.48550/arXiv.1602.07360.10.48550/arXiv.1602.07360 ↗
98. 10.1016/j.compbiomed.2021.10471210.1016/j.compbiomed.2021.104712 ↗
99. 10.3390/biomedicines1011274610.3390/biomedicines10112746 ↗
100. 10.1109/TCBB.2020.299478010.1109/TCBB.2020.2994780 ↗