journal article·2026-04Open access

Immunoregulatory protein-hybrid extracellular vesicles via self-loadable backbone cyclization for oral inflammatory bowel disease therapy

Yeonju Lee, Chaerim Yoo, Kyung-Min Kim, Sumin Kim, Yu Kyung Oh, Sookyung Cho, Gil-Ran Kim, Je-Min Choi, Ji Yeong Yang, Hyo-Il Jung, Sijin Park, Dong Yun Lee, Young-Pil Kim

Abstract

Despite the potential of extracellular vesicles (EVs) and therapeutic proteins as carriers and cargos for oral delivery, their precise functional integration remains a persistent challenge, thereby limiting synergistic therapeutic outcomes. Here, we present a protein-hybrid, orally delivered EV strategy that integrates naturally bioactive EVs with self-loadable, backbone-cyclized immunoregulatory proteins for inflammatory bowel disease (IBD) therapy. Through computationally guided design and split intein-mediated backbone cyclization, we generated cyclized variants of key immunoregulatory proteins with improved functionality. Among these, C-R 4 -tagged cyclization of phosphatase domain of T-cell protein tyrosine phosphatase (ppTCPTP) improved membrane permeability, thermal stability, and anti-inflammatory activity. This backbone cyclization enabled efficient and high-capacity loading of ppTCPTP into native EVs that are not amenable to genetic engineering. Notably, these protein-hybrid EVs exhibited acidic resistance for oral delivery and synergistically enhanced antioxidant and anti-inflammatory effects in murine IBD organoids and in vivo colitis models, markedly reducing intestinal inflammation and restoring epithelial barrier integrity. Our findings highlight the translational potential of this self-loadable protein-EV platform as a safe and potent oral biologic for IBD therapy.
Source: openalex_inverted_index · Quality: baseline

Research context

OpenAlex topics: Extracellular vesicles in disease · Supramolecular Self-Assembly in Materials · Nanoplatforms for cancer theranostics

SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.

References (66)

Show source-provided references
1. Protein therapeutics: a summary and pharmacological classification10.1038/nrd2399 ↗
2. Engineering protein-based therapeutics through structural and chemical design10.1038/s41467-023-38039-x ↗
3. Resolution of chronic inflammatory disease: universal and tissue-specific concepts10.1038/s41467-018-05800-6 ↗
4. Inflammatory bowel disease: classifying global regions by epidemiological stage10.1038/s41575-025-01080-w ↗
5. Understanding the therapeutic toolkit for inflammatory bowel disease10.1038/s41575-024-01035-7 ↗
6. Targeting T cells in inflammatory bowel disease10.1016/j.phrs.2020.105040 ↗
7. Maintenance therapy with certolizumab pegol for crohn's disease10.1056/NEJMoa062897 ↗
8. IL-12 and IL-23 pathway inhibition in inflammatory bowel disease10.1038/s41575-023-00768-1 ↗
9. An oral CD3-Specific antibody suppresses T-cell-induced colitis and alters cytokine responses to T-cell activation in mice10.1053/j.gastro.2012.07.019 ↗
10. Anti-integrins for the treatment of inflammatory bowel disease: current evidence and perspectives10.2147/CEG.S293272 ↗
11. Overall and comparative safety of biologic and immunosuppressive therapy in inflammatory bowel diseases10.1080/1744666X.2019.1646127 ↗
12. Comparative risk of serious infections with biologic And/or immunosuppressive therapy in patients with inflammatory bowel diseases: a systematic review and meta-analysis10.1016/j.cgh.2019.02.044 ↗
13. Oral semaglutide and cardiovascular outcomes in patients with type 2 diabetes10.1056/NEJMoa1901118 ↗
14. Extracellular vesicles as drug delivery systems: why and how?10.1016/j.addr.2020.04.004 ↗
15. Exogenous extracellular vesicles as emerging platforms in translational medicine10.15212/bioi-2025-0122 ↗
16. Engineered extracellular vesicles for tissue repair and regeneration10.1093/burnst/tkae062 ↗
17. Cyclized proteins with tags as permeable and stable cargos for delivery into cells and liposomes10.1016/j.ijbiomac.2023.126520 ↗
18. EpCAM-dependent extracellular vesicles from intestinal epithelial cells maintain intestinal tract immune balance10.1038/ncomms13045 ↗
19. Therapeutic potential of mesenchymal stem cell-derived extracellular vesicles: a focus on inflammatory bowel disease10.1002/ctm2.70075 ↗
20. Exosomes derived from M2b macrophages attenuate DSS-induced colitis10.3389/fimmu.2019.02346 ↗
21. Therapeutic applications of extracellular vesicles in inflammatory bowel disease10.3390/ijms25020745 ↗
22. Plant-derived extracellular vesicles as oral drug delivery carriers10.1016/j.jconrel.2022.08.046 ↗
23. Protein tyrosine phosphatase conjugated with a novel transdermal delivery peptide, astrotactin 1-derived peptide recombinant protein tyrosine phosphatase (AP-rPTP), alleviates both atopic dermatitis-like and psoriasis-like dermatitis10.1016/j.jaci.2017.04.007 ↗
24. dNP2 is a blood-brain barrier-permeable peptide enabling ctCTLA-4 protein delivery to ameliorate experimental autoimmune encephalomyelitis10.1038/ncomms9244 ↗
25. Cyclisation and docking protocol for cyclic peptide-protein modelling using HADDOCK2.410.1021/acs.jctc.2c00075 ↗
26. CHARMM-GUI toward realistic biological membrane simulations10.1002/jcc.23702 ↗
27. Physical properties of model biological lipid bilayers: insights from all-atom molecular dynamics simulations10.1007/s00894-019-3964-0 ↗
28. Improving cellular uptake of therapeutic entities through interaction with components of cell membrane10.1080/10717544.2019.1582730 ↗
29. Antimicrobial peptides and proteins: from nature's reservoir to the laboratory and beyond10.3389/fchem.2021.691532 ↗
30. Engineering cyclized biomolecules for advanced diagnostic and therapeutic applications10.1016/j.biotechadv.2025.108694 ↗
31. Cell-surface interactions on arginine-rich cell-penetrating peptides allow for multiplex modes of internalization10.1021/acs.accounts.7b00221 ↗
32. The cysteine-containing cell-penetrating peptide AP enables efficient macromolecule delivery to T cells and controls autoimmune encephalomyelitis10.3390/pharmaceutics13081134 ↗
33. The naturally split Npu DnaE intein exhibits an extraordinarily high rate in the protein trans-splicing reaction10.1016/j.febslet.2009.02.003 ↗
34. Cellular uptake of large biomolecules enabled by cell-surface-reactive cell-penetrating peptide additives10.1038/s41557-021-00661-x ↗
35. Transduction of the cytoplasmic domain of CTLA-4 inhibits TcR-specific activation signals and prevents collagen-induced arthritis10.1073/pnas.0805198105 ↗
36. Intranasal delivery of the cytoplasmic domain of CTLA-4 using a novel protein transduction domain prevents allergic inflammation10.1038/nm1385 ↗
37. In vivo induction of regulatory T cells via CTLA-4 signalling peptide to control autoimmune encephalomyelitis and prevent disease relapse
38. T cell protein tyrosine phosphatase in osteoimmunology
39. Insights into antioxidant activities and anti-skin-aging potential of callus extract from Centella asiatica (L.)10.1038/s41598-021-92958-7 ↗
40. Characterization of bioactive compounds having antioxidant and anti-inflammatory effects of liliaceae family flower petal extracts10.3390/jfb13040284 ↗
41. Composition and antioxidant activity of Paeonia lactiflora petal flavonoid extract and underlying mechanisms of the protective effect on H2O2-induced oxidative damage in BRL3A cells, hortic
42. Antioxidant activities of licorice-derived prenylflavonoids10.4162/nrp.2012.6.6.491 ↗
43. Extracellular vesicles from a novel strain suppress inflammation and promote M2 macrophage polarization10.3389/fimmu.2024.1459213 ↗
44. Single Lgr5 stem cells build crypt-villus structures without a mesenchymal niche10.1038/nature07935 ↗
45. Intestinal crypt organoids as experimental models
46. Extracellular vesicles and their indispensable roles in pathogenesis and treatment of inflammatory bowel disease: a comprehensive review10.1016/j.lfs.2023.121830 ↗
47. Unleashing the potential of extracellular vesicles for ulcerative colitis and crohn's disease therapy
48. Milk-derived extracellular vesicles functionalized with anti-tumour necrosis factor-α nanobody and anti-microbial peptide alleviate ulcerative colitis in mice10.1002/jev2.12462 ↗
49. Milk-derived extracellular vesicles and gut health10.1038/s41538-025-00375-1 ↗
50. Recent advances in extracellular vesicles for therapeutic cargo delivery10.1038/s12276-024-01201-6 ↗
51. Current strategies for exosome cargo loading and targeting delivery10.3390/cells12101416 ↗
52. Rejuvenation of tendon stem/progenitor cells for functional tendon regeneration through platelet-derived exosomes loaded with recombinant Yap110.1016/j.actbio.2023.02.018 ↗
53. Sonication is a suitable method for loading nanobody into glioblastoma small extracellular vesicles10.1016/j.heliyon.2023.e15674 ↗
54. Exosomes as drug delivery vehicles for parkinson's disease therapy10.1016/j.jconrel.2015.03.033 ↗
55. Extracellular vesicles engineered with valency-controlled DNA nanostructures deliver CRISPR/Cas9 system for gene therapy10.1093/nar/gkaa683 ↗
56. Designing nanotheranostics with machine learning10.1038/s41565-024-01753-8 ↗
57. Engineering cellular vesicles for immunotherapy10.1021/accountsmr.4c00362 ↗
58. Antiviral covalent ACE2 vesicle spray10.1016/j.celbio.2025.100017 ↗
59. Illuminating extracellular vesicles with advanced fluorescence biosensing technologies10.1016/j.trac.2025.118228 ↗
60. Plant-derived exosome-like nanovesicles: a novel nanotool for disease therapy
61. Plant-derived nanovesicles and therapeutic application10.1016/j.pharmthera.2025.108832 ↗
62. T-cell protein tyrosine phosphatase (tcptp) is a negative regulator of colony-stimulating factor 1 signaling and macrophage differentiation10.1128/MCB.01932-05 ↗
63. The phosphatases TCPTP, PTPN22, and SHP1 play unique roles in T cell phosphotyrosine maintenance and feedback regulation of the TCR10.1038/s41598-025-12951-2 ↗
64. PTPN2 attenuates T-cell lymphopenia-induced proliferation10.1038/ncomms4073 ↗
65. T cell protein tyrosine phosphatase protects intestinal barrier function by restricting epithelial tight junction remodeling10.1172/JCI138230 ↗
66. PTPN2 regulates bacterial clearance in a mouse model of enteropathogenic and enterohemorrhagic E. coli infection10.1172/jci.insight.156909 ↗