journal article·2023-12Open access

Cytosolic Interactome Protects Against Protein Unfolding in a Single Molecule Experiment

Barbara Scalvini, Laurens W.H.J. Heling, Vahid Sheikhhassani, Vanda Sunderlikova, Sander J. Tans, Alireza Mashaghi

Advanced Biology· Volume 7· Issue 12

Abstract

Abstract Single molecule techniques are particularly well suited for investigating the processes of protein folding and chaperone assistance. However, current assays provide only a limited perspective on the various ways in which the cellular environment can influence the folding pathway of a protein. In this study, a single molecule mechanical interrogation assay is developed and used to monitor protein unfolding and refolding within a cytosolic solution. This allows to test the cumulative topological effect of the cytoplasmic interactome on the folding process. The results reveal a stabilization against forced unfolding for partial folds, which are attributed to the protective effect of the cytoplasmic environment against unfolding and aggregation. This research opens the possibility of conducting single molecule molecular folding experiments in quasi‐biological environments.
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Research context

OpenAlex topics: Protein Structure and Dynamics · Force Microscopy Techniques and Applications · RNA and protein synthesis mechanisms

SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.

Affiliations

Medical Systems Biophysics and Bioengineering Leiden Academic Centre for Drug Research Faculty of Science Leiden University Einsteinweg 55 Leiden 2333CC The Netherlands

Centre for Interdisciplinary Genome Research Faculty of Science Leiden University Einsteinweg 55 Leiden 2333CC The Netherlands

AMOLF Science Park 104 Amsterdam 1098 XG The Netherlands

Department of Bionanoscience Kavli Institute of Nanoscience Delft University of Technology Van der Maasweg 9 Delft 2629HZ The Netherlands

Funding

Nederlandse Organisatie voor Wetenschappelijk Onderzoek · Muscular Dystrophy Association

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