journal article·2021-07-01Open access

Charge density studies of multicentre two-electron bonding of an anion radical at non-ambient temperature and pressure

Valentina Milašinović, Krešimir Molčanov, Anna Krawczuk, Nikita E. Bogdanov, Boris A. Zakharov, Elena V. Boldyreva, Christian Jelsch, Biserka Kojić-Prodić

IUCrJ· Volume 8· Issue 4

Abstract

The variation of charge density of two-electron multicentre bonding (pancake bonding) between semiquinone radicals with pressure and temperature was studied on a salt of 5,6-dichloro-2,3-dicyanosemiquinone radical anion (DDQ) with 4-cyano-N-methylpyridinium cation (4-CN) using the Transferable Aspheric Atom Model (TAAM) refinement. The pancake-bonded radical dimers are stacked by non-bonding π-interactions. With rising pressure, the covalent character of interactions between radicals increases, and above 2.55 GPa, the electron density indicates multicentric covalent interactions throughout the stack. The experimental charge densities were verified and corroborated by periodic DFT computations. The TAAM approach has been tested and validated for atomic resolution data measured at ambient pressure; this work shows this approach can also be applied to diffraction data obtained at pressures up to several gigapascals.
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Research context

OpenAlex topics: Advanced Chemical Physics Studies · Photochemistry and Electron Transfer Studies · Spectroscopy and Quantum Chemical Studies

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References (71)

Show source-provided references
1. Allen · Acta Cryst. B · 2010 · 66 · 38010.1107/S0108768110012048 ↗
2. Angel · J. Appl. Cryst. · 2013 · 46 · 25210.1107/S0021889812048431 ↗
3. Bader, R. F. W. (1990). Atoms in Molecules: a Quantum Theory. Oxford University Press.10.1093/oso/9780198551683.001.0001 ↗
4. Bąk · Acta Cryst. A · 2011 · 67 · 14110.1107/S0108767310049731 ↗
5. Blessing · Crystallogr. Rev. · 1987 · 1 · 310.1080/08893118708081678 ↗
6. Boehler · Rev. Sci. Instrum. · 2006 · 77 · 200410.1063/1.2372734 ↗
7. Bogdanov · Acta Cryst. B · 2020 · 76 · 28510.1107/S2052520620002772 ↗
8. Brock · Acta Cryst. B · 1991 · 47 · 78910.1107/S0108768191003932 ↗
9. Casati · Acta Cryst. B · 2017 · 73 · 58410.1107/S2052520617008356 ↗
10. Casati · Nat. Commun. · 2017 · 7 · 1090110.1038/ncomms10901 ↗
11. Chang, R. (2000). Physical Chemistry for the Chemical and Biological Sciences, 3rd ed. Sausalito: University Science Books.
12. Dittrich · Acta Cryst. B · 2013 · 69 · 9110.1107/S2052519213002285 ↗
13. Dittrich · Angew. Chem. Int. Ed. · 2004 · 43 · 271810.1002/anie.200353596 ↗
14. Domagała · Acta Cryst. A · 2012 · 68 · 33710.1107/S0108767312008197 ↗
15. Domagała · CrystEngComm · 2016 · 18 · 711610.1039/C6CE01095D ↗
16. Domagała · Cryst. Growth Des. · 2014 · 14 · 483410.1021/cg501013x ↗
17. Dovesi, R., Erba, A., Orlando, R., Zicovich-Wilson, C. M., Civalleri, B., Maschio, L., Rérat, M., Casassa, S., Baima, J., Salustro, S. & Kirtman, B. (2018). WIREs Comput. Mol. Sci. 8, e1360.10.1002/wcms.1360 ↗
18. Farrugia · J. Appl. Cryst. · 1997 · 30 · 56510.1107/S0021889897003117 ↗
19. Farrugia · J. Appl. Cryst. · 2012 · 45 · 84910.1107/S0021889812029111 ↗
20. Forman · Science · 1972 · 176 · 28410.1126/science.176.4032.284 ↗
21. Frisch, M. J., Trucks, G. W., Schlegel, H. B., Scuseria, G. E., Robb, M. A., Cheeseman, J. R., Scalmani, G., Barone, V., Petersson, G. A., Nakatsuji, H., Li, X., Caricato, M., Marenich, A. V., Bloino, J., Janesko, B. G., Gomperts, R., Mennucci, B., Hratchian, H. P., Ortiz, J. V., Izmaylov, A. F., Sonnenberg, J. L., Williams-Young, D., Ding, F., Lipparini, F., Egidi, F., Goings, J., Peng, B., Petrone, A., Henderson, T., Ranasinghe, D., Zakrzewski, V. G., Gao, J., Rega, N., Zheng, G., Liang, W., Hada, M., Ehara, M., Toyota, K., Fukuda, R., Hasegawa, J., Ishida, M., Nakajima, M., Honda, Y., Kitao, O., Nakai, H., Vreven, T., Throssell, K., Montgomery, J. A. Jr, Peralta, J. E., Ogliaro, F., Bearpark, M. J., Heyd, J. J., Brothers, E. N., Kudin, K. N., Staroverov, V. N., Keith, T. A., Kobayashi, R., Normand, J., Raghavachari, K., Rendell, A. P., Burant, J. C., Iyengar, S. S., Tomasi, J., Cossi, M., Millam, J. M., Klene, M., Adamo, C., Cammi, R., Ochterski, J. W., Martin, R. L., Morokuma, K., Farkas, O., Foresman, J. B. & Fox, D. J. (2016). Gaussian 16, Revision C. 01, Gaussian, Inc., Wallingford, CT, USA.
22. Gajda · Cryst. Growth Des. · 2014 · 14 · 573710.1021/cg500984p ↗
23. Gajda · IUCrJ · 2020 · 7 · 38310.1107/S2052252520001955 ↗
24. Gatti, C. & Casassa, S. (2017). TOPOND14 User Manual. CNR-ISTM of Milan, Milan, Spain.
25. Genoni · Chem. Eur. J. · 2018 · 24 · 1088110.1002/chem.201705952 ↗
26. Genoni · IUCrJ · 2017 · 4 · 13610.1107/S2052252516019217 ↗
27. Genoni · Chem. Eur. J. · 2018 · 24 · 1550710.1002/chem.201803988 ↗
28. Genoni · Crystals · 2020 · 10 · 47310.3390/cryst10060473 ↗
29. Grabowsky · Chem. Sci. · 2017 · 8 · 415910.1039/C6SC05504D ↗
30. Grimme · J. Chem. Phys. · 2010 · 132 · 15410410.1063/1.3382344 ↗
31. Guillot · Acta Cryst. A · 2012 · 68 · s20410.1107/S0108767312096067 ↗
32. Jarzembska · Acta Cryst. A · 2012 · 68 · 13910.1107/S0108767311042176 ↗
33. Jelsch · J. Appl. Cryst. · 2005 · 38 · 3810.1107/S0021889804025518 ↗
34. Kertesz · Chem. Eur. J. · 2019 · 25 · 40010.1002/chem.201802385 ↗
35. Koritsanszky · Acta Cryst. A · 2002 · 58 · 46410.1107/S0108767302010991 ↗
36. Koritsanszky · Chem. Rev. · 2001 · 101 · 158310.1021/cr990112c ↗
37. Korlyukov · Russ. Chem. Rev. · 2019 · 88 · 67710.1070/RCR4866 ↗
38. Krause · IUCrJ · 2017 · 4 · 42010.1107/S2052252517005103 ↗
39. Lecomte · J. Mol. Struct. · 2003 · 647 · 5310.1016/S0022-2860(02)00524-0 ↗
40. Macchi · Crystallogr. Rev. · 2013 · 19 · 5810.1080/0889311X.2013.785538 ↗
41. Macchi, P. (2021). Quantum Crystallography: Fundamentals and Applications, Bern: De Gruyter.
42. Macchi · IUCrJ · 2015 · 2 · 44110.1107/S2052252515007538 ↗
43. Macrae · J. Appl. Cryst. · 2020 · 53 · 22610.1107/S1600576719014092 ↗
44. Madsen · J. Appl. Cryst. · 2006 · 39 · 75710.1107/S0021889806026379 ↗
45. Meindl · Acta Cryst. A · 2008 · 64 · 40410.1107/S0108767308006879 ↗
46. Milašinović · Cryst. Growth Des. · 2020 · 20 · 543510.1021/acs.cgd.0c00658 ↗
47. Molčanov · Cryst. Growth Des. · 2019 · 19 · 39110.1021/acs.cgd.8b01484 ↗
48. Molčanov · IUCrJ · 2019 · 6 · 15610.1107/S2052252519000186 ↗
49. Molčanov · Cryst. Growth Des. · 2019 · 19 · 596710.1021/acs.cgd.9b00540 ↗
50. Molčanov · Chem. Eur. J. · 2018 · 24 · 829210.1002/chem.201800672 ↗
51. Molčanov · CrystEngComm · 2018 · 20 · 186210.1039/C7CE02146A ↗
52. Molčanov · J. Mol. Struct. · 2011 · 987 · 17410.1016/j.molstruc.2010.12.011 ↗
53. Munshi · Crystallogr. Rev. · 2005 · 11 · 19910.1080/08893110500245899 ↗
54. Nassour · Acta Cryst. B · 2017 · 73 · 61010.1107/S2052520617008204 ↗
55. Novoa · Acc. Chem. Res. · 2007 · 40 · 18910.1021/ar068175m ↗
56. Pichon-Pesme · J. Phys. Chem. · 1995 · 99 · 624210.1021/j100016a071 ↗
57. Piermarini · J. Appl. Phys. · 1973 · 44 · 537710.1063/1.1662159 ↗
58. Piermarini · J. Appl. Phys. · 1975 · 46 · 277410.1063/1.321957 ↗
59. Preuss · Polyhedron · 2014 · 79 · 110.1016/j.poly.2014.04.005 ↗
60. Rigaku Oxford Diffraction (2018). CrysAlisPRO, version: 1.171.39.46, Rigaku Corporation, Oxford, UK.
61. Stalke · Chem. Eur. J. · 2011 · 17 · 926410.1002/chem.201100615 ↗
62. Stalke, D. (2015). Charge Density and Chemical Bonding, pp. 199. Springer International Publishing.
63. Stilinović · Acta Cryst. A · 2010 · 66 · 44110.1107/S0108767310013814 ↗
64. Tse · Natl. Sci. Rev. · 2020 · 7 · 14610.1093/nsr/nwz144 ↗
65. Vilela Oliveira · J. Comput. Chem. · 2019 · 40 · 236410.1002/jcc.26013 ↗
66. Wenger, E. (2015). PhD thesis, Université de Lorraine, Nancy, France.
67. Yanai · Chem. Phys. Lett. · 2004 · 393 · 5110.1016/j.cplett.2004.06.011 ↗
68. Yoo · Matter Radiat. Extremes · 2020 · 5 · 01820210.1063/1.5127897 ↗
69. Zakharov · J. Appl. Cryst. · 2013 · 46 · 26710.1107/S0021889812046912 ↗
70. Zarychta · Acta Cryst. A · 2007 · 63 · 10810.1107/S0108767306053748 ↗
71. Zarychta · Acta Cryst. B · 2011 · 67 · 25010.1107/S0108768111013140 ↗