journal article·2026-04-17Open access

Latent Diffusion Model for Chlorophyll Remote Sensing Spectral Synthesis Integrating Bio-Optical Priors and Band Attention Mechanisms

Jinming Liu, Haoran Zhang, Jianlong Huang, Hanbin Wen, Qinpei Chen, Jiayi Liu, Chaowen Wen, Huiling Tang, Zhaohua Sun

Applied Sciences· Volume 16· Issue 8

Abstract

Global freshwater resources face severe water quality degradation, with chlorophyll-a (Chl-a) concentration serving as a critical eutrophication indicator. While deep learning methods enable accurate Chl-a retrieval from remote sensing reflectance (Rrs) spectra, the scarcity of paired Rrs-Chl-a samples limits model generalization and causes overfitting, particularly in optically complex inland waters. To address this data bottleneck, we propose a physics-constrained latent diffusion model for synthesizing high-fidelity paired Rrs-Chl-a data to augment limited training sets for deep learning-based water quality retrieval. Our framework integrates three key innovations: (1) a lightweight variational autoencoder achieving 8.6:1 latent space compression, reducing computational overhead while preserving spectral features; (2) band-selective attention mechanisms targeting chlorophyll-sensitive wavelengths (440, 550, 680, and 700–750 nm) based on bio-optical principles; and (3) physics-guided conditional encoding that captures concentration-dependent spectral responses across oligotrophic to eutrophic regimes. Evaluated on the GLORIA dataset, our model demonstrates superior performance in spectral similarity (0.535), sample diversity (0.072), and distribution matching (Fréchet distance 0.0008) compared to conventional generative models. When applied to data augmentation, synthetic spectra improved downstream Chl-a retrieval from R2= 0.75 to 0.91, reducing RMSE by 39%. This physics-informed generative approach addresses data scarcity in aquatic remote sensing research, supporting global needs for enhanced understanding of inland and coastal water quality dynamics in data-limited regions.
Source: crossref · Quality: baseline

Research context

OpenAlex topics: Marine and coastal ecosystems · Remote Sensing in Agriculture · Hydrological Forecasting Using AI

SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.

Affiliations

School of Innovation and Entrepreneurship, Southern University of Science and Technology, Shenzhen 518055, China

Anhua Ocean Intelligent Equipment Co., Ltd., Shenzhen 518000, China

School of Physics & Optoelectronic Engineering, Guangdong University of Technology, Guangzhou 510006, China

College of Aviation and Drone Technology, Guangdong Communication Polytechnic, Guangzhou 510650, China

Funding

Southern University of Science and Technology Research Project on Optical Intelligent Sensors and Intelligent Algorithms · Wuhan East Lake “Air-Space-Ground-Water” Integrated Observation Project · Guangdong Basic and Applied Basic Research Foundation

References (39)

Show source-provided references
1. World Health Organization (2023). Progress on Household Drinking Water, Sanitation and Hygiene 2000–2022: Special Focus on Gender, World Health Organization.
2. A new approach to quantify chlorophyll-a over inland water targets based on multi-source remote sensing data10.1016/j.scitotenv.2023.167631 ↗
3. Li, Y., Fu, Y., Lang, Z., and Cai, F. (2024). A high-frequency and real-time ground remote sensing system for obtaining water quality based on a micro hyper-spectrometer. Sensors, 24.10.3390/s24061833 ↗
4. An investigation into water quality monitoring models using remote sensing10.1080/01431161.2024.2439083 ↗
5. Deng, Y., Zhang, Y., Pan, D., Yang, S.X., and Gharabaghi, B. (2024). Review of recent advances in remote sensing and machine learning methods for lake water quality management. Remote Sens., 16.10.3390/rs16224196 ↗
6. Mohan, S., Kumar, B., and Nejadhashemi, A.P. (2025). Integration of machine learning and remote sensing for water quality monitoring and prediction: A review. Sustainability, 17.10.3390/su17030998 ↗
7. Monitoring inland water quality using remote sensing: Potential and limitations of spectral indices, bio-optical simulations, machine learning, and cloud computing10.1016/j.earscirev.2020.103187 ↗
8. Deep learning for water quality multivariate assessment in inland water across China
9. Aptoula, E., and Ariman, S. (2021). Chlorophyll-a retrieval from Sentinel-2 images using convolutional neural network regression. IEEE Geosci. Remote Sens. Lett., 19.10.1109/LGRS.2021.3070437 ↗
10. A study on global oceanic chlorophyll-a concentration inversion model for MODIS using machine learning algorithms10.1109/ACCESS.2024.3456481 ↗
11. Xu, Q., Yang, G., Yin, X., and Sun, T. (2025). Reconstruction of Sea Surface Chlorophyll-a Concentration in the Bohai and Yellow Seas Using LSTM Neural Network. Remote Sens., 17.10.3390/rs17010174 ↗
12. Zhang, Y., Li, C., Wu, X., Xiang, H., Jiao, Y., and Chai, H. (2024). CNN-BiLSTM model for winter wheat yield estimation by fusing spectral indices and solar-induced fluorescence. Front. Plant Sci., 15.10.3389/fpls.2024.1500499 ↗
13. Deep learning for water quality10.1038/s44221-024-00202-z ↗
14. Deep representation learning enables cross-basin water quality prediction under data-scarce conditions10.1038/s41545-025-00466-2 ↗
15. Research progress in water quality prediction based on deep learning technology: A review10.1007/s11356-024-33058-7 ↗
16. Generative adversarial network augmentation for solving the training data imbalance problem in crop classification10.1080/2150704X.2023.2275551 ↗
17. Unveiling the potential of diffusion model-based framework with transformer for hyperspectral image classification10.1038/s41598-024-58125-4 ↗
18. An in-depth review and analysis of mode collapse in generative adversarial networks10.1007/s10994-025-06772-7 ↗
19. Feature-preserving generative adversarial network data augmentation strategy for hyperspectral image classification10.1016/j.patcog.2023.109701 ↗
20. Liu, L., Chen, B., Chen, H., Zou, Z., and Shi, Z. (2023). Diverse hyperspectral remote sensing image synthesis with diffusion models. IEEE Trans. Geosci. Remote Sens., 61.10.1109/TGRS.2023.3335975 ↗
21. Hyperspectral data augmentation with transformer-based diffusion models
22. Chen, B., Liu, L., Liu, C., Zou, Z., and Shi, Z. (2024). Spectral-Cascaded Diffusion Model for Remote Sensing Image Spectral Super-Resolution. IEEE Trans. Geosci. Remote Sens.10.1109/TGRS.2024.3450874 ↗
23. Chlorophyll algorithms for ocean color sensors-OC4, OC5 & OC610.1016/j.rse.2019.04.021 ↗
24. Perspectives on empirical approaches for ocean color remote sensing of chlorophyll in a changing climate10.1073/pnas.0913800107 ↗
25. Deriving inherent optical properties from water color: A multiband quasi-analytical algorithm for optically deep waters10.1364/AO.41.005755 ↗
26. Optimization of a semianalytical ocean color model for global-scale applications10.1364/AO.41.002705 ↗
27. Baek, S.S., Pyo, J., and Chun, J.A. (2020). Prediction of water level and water quality using a CNN-LSTM combined deep learning approach. Water, 12.10.3390/w12123399 ↗
28. Harmel, R.D., Preisendanz, H.E., King, K.W., Busch, D., Birgand, F., and Sahoo, D. (2023). A review of data quality and cost considerations for water quality monitoring at the field scale and in small watersheds. Water, 15.10.3390/w15173110 ↗
29. Goodfellow, I.J., Pouget-Abadie, J., Mirza, M., Xu, B., Warde-Farley, D., Ozair, S., Courville, A., and Bengio, Y. (2014). Generative adversarial nets. Adv. Neural Inf. Process. Syst., 27.
30. Satellite-ground synchronous in-situ dataset of water optical parameters and surface temperature for typical lakes in China10.1038/s41597-024-03704-3 ↗
31. Lekavičius, J., and Gružauskas, V. (2024). Data Augmentation with Generative Adversarial Network for Solar Panel Segmentation from Remote Sensing Images. Energies, 17.10.20944/preprints202402.0821.v1 ↗
32. Effective data generation for imbalanced learning using conditional generative adversarial networks10.1016/j.eswa.2017.09.030 ↗
33. Kingma, D.P., and Welling, M. (2013). Auto-encoding variational bayes. arXiv.
34. Dang, H., Tran, T., Nguyen, T., and Ho, N. (2023). Beyond vanilla variational autoencoders: Detecting posterior collapse in conditional and hierarchical variational autoencoders. arXiv.
35. Denoising diffusion probabilistic models
36. Rombach, R., Blattmann, A., Lorenz, D., Esser, P., and Ommer, B. (2022). High-resolution image synthesis with latent diffusion models. Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition, New Orleans, LA, USA, 18–24 June 2022, IEEE.10.1109/CVPR52688.2022.01042 ↗
37. Diffusion models meet remote sensing: Principles, methods, and perspectives
38. Optical modeling of the upper ocean in relation to its biogenous matter content (Case I waters)10.1029/JC093iC09p10749 ↗
39. GLORIA—A globally representative hyperspectral in situ dataset for optical sensing of water quality10.1038/s41597-023-01973-y ↗