journal article·2026-01-13Open access

Benchmarking Automated and Semi-Automated Vocal Clustering Methods

Kanghwi Lee, Maris Basha, Anja T. Zai, Richard H. R. Hahnloser

Applied Sciences· Volume 16· Issue 2

Abstract

Analyzing large datasets of animal vocalizations requires efficient bioacoustic methods for categorizing the vocalization types. This study evaluates the effectiveness of different vocalization clustering methods, comparing fully automated and semi-automated methods against the gold standard of manual expert annotations. Effective methods achieve good clustering performance whilst minimizing human effort. We release a new dataset of 1454 zebra finch vocalizations manually clustered by experts, on which we evaluate (i) fully automated clustering using off-the-shelf methods based on sound embeddings and (ii) a semi-automated workflow relying on refining the embedding-derived clusters. Clustering performance is assessed using the Adjusted Rand Index (ARI) and Normalized Mutual Information (NMI). Results indicate that while fully automated methods provide a useful baseline, they generally fall short of human-level consistency. In contrast, the semi-automated workflow achieved agreement scores comparable to inter-expert reliability, approaching the levels of expert manual clustering. This demonstrates that refining embedding-derived clusters reduces annotation time while maintaining gold standard accuracy. We conclude that semi-automated workflows offer an optimal strategy for bioacoustics, enabling the scalable analysis of large datasets without compromising the precision required for robust behavioral insights.
Source: crossref · Quality: baseline

Research context

OpenAlex topics: Animal Vocal Communication and Behavior · Neuroendocrine regulation and behavior · Animal Behavior and Reproduction

SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.

Affiliations

Institute of Neuroinformatics, University of Zurich and ETH Zurich, Winterthurerstrasse 190, 8057 Zurich, Switzerland

Funding

Swiss National Science Foundation, Projects

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