journal article·2024-08-03Open access

A Feature Selection-Incorporated Simulation Study to Reveal the Effect of Calcium Ions on Cardiac Repolarization Alternans during Myocardial Ischemia

Kaihao Gu, Zihui Geng, Yuwei Yang, Shengjie Yan, Bo Hu, Xiaomei Wu

Applied Sciences· Volume 14· Issue 15

Abstract

(1) Background: The main factors and their interrelationships contributing to cardiac repolarization alternans (CRA) remain unclear. This study aimed to elucidate the calcium (Ca2+)-related mechanisms underlying myocardial ischemia (MI)-induced CRA. (2) Materials and Methods: CRA was induced using S1 stimuli for pacing in an in silico ventricular model with MI. The standard deviations of nine Ca2+-related subcellular parameters among heartbeats from 100 respective nodes with and without alternans were chosen as features, including the maximum systole and end-diastole and corresponding differences in the Ca2+ concentration in the intracellular region([Ca2+]i) and junctional sarcoplasmic reticulum ([Ca2+]jsr), as well as the maximum opening of the L-type Ca2+ current (ICaL) voltage-dependent activation gate (d-gate), maximum closing of the inactivation gate (ff-gate), and the gated channel opening time (GCOT). Feature selection was applied to determine the importance of these features. (3) Results: The major parameters affecting CRA were the differences in [Ca2+]i at end-diastole, followed by the extent of d-gate activation and GCOT among beats. (4) Conclusions: MI-induced CRA is primarily characterized by functional changes in Ca2+ re-uptake, leading to alternans of [Ca2+]i and subsequent alternans of ICaL-dependent properties. The combination of computational simulation and machine learning shows promise in researching the underlying mechanisms of cardiac electrophysiology.
Source: crossref · Quality: baseline

Research context

OpenAlex topics: Cardiac electrophysiology and arrhythmias · Fault Detection and Control Systems · Computational Drug Discovery Methods

SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.

Affiliations

Department of Biomedical Engineering, School of Information Science and Technology, Fudan University, Shanghai 200438, China

Academy for Engineering and Technology, Fudan University, Shanghai 200433, China

Department of Electronic Engineering, School of Information Science and Technology, Fudan University, Shanghai 200438, China

Yiwu Research Institute, Fudan University, Yiwu 322000, China

The Key Laboratory of Medical Imaging Computing and Computer Assisted Intervention (MICCAI) of Shanghai, Shanghai 200032, China

Research Center of Assistive Devices, Shanghai 200093, China

Funding

National Key Research and Development Program of China, China

References (41)

Show source-provided references
1. Global Epidemiology of Ischemic Heart Disease: Results from the Global Burden of Disease Study
2. Myocardial ischaemia–reperfusion injury and cardioprotection in perspective10.1038/s41569-020-0403-y ↗
3. Han, B., Trew, M.L., and Zgierski-Johnston, C.M. (2021). Cardiac Conduction Velocity, Remodeling and Arrhythmogenesis. Cells, 10.10.3390/cells10112923 ↗
4. Sudden Cardiac Death in Ischemic Heart Disease: From Imaging Arrhythmogenic Substrate to Guiding Therapies
5. Cardiac Alternans: Mechanisms and Clinical Utility in Arrhythmia Prevention10.1161/JAHA.119.013750 ↗
6. From pulsus to pulseless: The saga of cardiac alternans10.1161/01.RES.0000224540.97431.f0 ↗
7. The Relationship between T-Wave Alternans and Adverse Cardiac Events in Patients with Congenital Long QT Syndrome: A Systematic Review and Meta-Analysis10.32604/CHD.2021.017292 ↗
8. Cardiac Ionic Currents and Acute Ischemia: From Channels to Arrhythmias10.1152/physrev.1999.79.3.917 ↗
9. Hyperkalemia in heart failure: Foe or friend?10.1002/clc.23392 ↗
10. Efficacy of selective NCX inhibition by ORM-10103 during simulated ischemia/reperfusion10.1016/j.ejphar.2014.06.033 ↗
11. Blockade of sodium-calcium exchanger via ORM-10962 attenuates cardiac alternans10.1016/j.yjmcc.2020.12.015 ↗
12. Sarcoplasmic Reticulum Calcium Content Fluctuation Is the Key to Cardiac Alternans10.1161/01.RES.0000119923.64774.72 ↗
13. Cardiac alternans do not rely on diastolic sarcoplasmic reticulum calcium content fluctuations10.1161/01.RES.0000244002.88813.91 ↗
14. Optical mapping of sarcoplasmic reticulum Ca 2+ in the intact heart10.1161/CIRCRESAHA.114.302505 ↗
15. Wang, L., Myles, R.C., Lee, I.-J., Bers, D.M., and Ripplinger, C.M. (2021). Role of Reduced Sarco-Endoplasmic Reticulum Ca2+-ATPase Function on Sarcoplasmic Reticulum Ca2+ Alternans in the Intact Rabbit Heart. Front. Physiol., 12.10.3389/fphys.2021.656516 ↗
16. Model systems for the discovery and development of antiarrhythmic drugs10.1016/j.pbiomolbio.2008.10.009 ↗
17. Molecular basis of functional voltage-gated K+ channel diversity in the mammalian myocardium10.1111/j.1469-7793.2000.t01-1-00285.x ↗
18. Geng, Z., Jin, L., Huang, Y., and Wu, X. (2022). Rate dependence of early afterdepolarizations in the His-Purkinje system: A simulation study. Comput. Methods Programs Biomed., 217.10.1016/j.cmpb.2022.106665 ↗
19. Geng, Z., Jin, L., Zhu, H., Wang, J., and Wu, X. (2021). Effects of increased extracellular potassium concentration induced by ischemia on the vulnerability of ventricular arrhythmias and the regularity of related ventricular tachycardia. Appl. Sci., 11.10.3390/app11052189 ↗
20. Generating Purkinje networks in the human heart10.1016/j.jbiomech.2015.12.025 ↗
21. O’Hara, T., Virág, L., Varró, A., and Rudy, Y. (2011). Simulation of the undiseased human cardiac ventricular action potential: Model formulation and experimental validation. PLoS Comput. Biol., 7.10.1371/journal.pcbi.1002061 ↗
22. A model for human ventricular tissue10.1152/ajpheart.00794.2003 ↗
23. A numerical method for the solution of the bidomain equations in cardiac tissue10.1063/1.166300 ↗
24. A feasibility study of arrhythmia risk prediction in patients with myocardial infarction and preserved ejection fraction10.1093/europace/euw351 ↗
25. Myocardial potassium loss and cell depolarisation in ischaemia and hypoxia10.1016/S0008-6363(96)88539-7 ↗
26. Modeling transmural heterogeneity of K-ATP current in rabbit ventricular myo-cytes10.1152/ajpcell.00148.2006 ↗
27. T-wave alternans and arrhythmogenesis in cardiac diseases10.3389/fphys.2010.00154 ↗
28. Hall, M.A. (1999). Correlation-based Feature Selection for Machine Learning. [Ph.D. Thesis, The University of Waikato].
29. Gu, Q., Li, Z., and Han, J. (2011, January 14–17). Generalized fisher score for feature selection. Proceedings of the 27th Conference on Uncertainty in Artificial Intelli-gence, Barcelona, Spain.
30. Relief-based feature selection: Introduction and review10.1016/j.jbi.2018.07.014 ↗
31. Minimum redundancy feature selection from microarray gene expression data10.1142/S0219720005001004 ↗
32. Cardiac metabolism as a driver and therapeutic target of myocardial infarction10.1111/jcmm.15180 ↗
33. Myocardial ATP depletion detected noninvasively predicts sudden cardiac death risk in patients with heart failure
34. Wang, R., Wang, M., He, S., Sun, G., and Sun, X. (2020). Targeting Calcium Homeostasis in Myocardial Ischemia/Reperfusion Injury: An Overview of Regulatory Mechanisms and Therapeutic Reagents. Front. Pharmacol., 11.10.3389/fphar.2020.00872 ↗
35. Effect of intracellular Ca2+ and action potential duration on L-type Ca2+ channel inactivation and recovery from inactivation in rabbit cardiac myocytes10.1152/ajpheart.00469.2006 ↗
36. Action potential: Generation and propagation10.1016/j.mpaic.2019.01.014 ↗
37. Alpert, N.M., Guehl, N., Ptaszek, L., Pelletier-Galarneau, M., Ruskin, J., Mansour, M.C., Wooten, D., Ma, C., Takahashi, K., and Zhou, Y. (2018). Quantitative in vivo mapping of myocardial mitochondrial membrane potential. PLoS ONE, 13.10.1371/journal.pone.0190968 ↗
38. Gauvrit, S., Bossaer, J., Lee, J., and Collins, M.M. (2022). Modeling Human Cardiac Arrhythmias: Insights from Zebrafish. J. Cardiovasc. Dev. Dis., 9.10.3390/jcdd9010013 ↗
39. Sutanto, H., and Heijman, J. (2022). Integrative Computational Modeling of Cardiomyocyte Calcium Handling and Cardiac Arrhythmias: Current Status and Future Challenges. Cells, 11.10.3390/cells11071090 ↗
40. Models of the cardiac L-type calcium current: A quantitative review10.1002/wsbm.1581 ↗
41. Modeling CICR in rat ventricular myocytes: Voltage clamp studies10.1186/1742-4682-7-43 ↗