journal article·2024-03-09Open access

Polymorphisms of PDCD1 and COL9A1 Genes in Plaque, Palmoplantar and Arthropathic Psoriasis in Romanian Patients

Doriana-Sorina Lupea-Chilom, Simona Sorina Farcas, Laura Claudia Popa, Anca Tudor, Nicoleta Ioana Andreescu

Applied Sciences· Volume 14· Issue 6

Abstract

In recent years, genetic studies have brought new insights into psoriasis, a chronic inflammatory disease with multiple determining and favoring factors. Recent advances in the technology of genetic analysis have enabled the discovery of many loci with causal or susceptibility roles and the finding of correlations related to different types of treatment responses. In this study, genomic deoxyribonucleic acid (DNA) was extracted from 2 mL peripheral blood for the evaluation of rs10204525 for Programmed Cell Death 1 (PDCD1) gene and rs550675 for Collagen Type IX Alpha 1 Chain (COL9A1) gene in 45 psoriasis patients and 43 healthy subjects without a personal pathological history of dermatological diseases. All patients were diagnosed by clinical and histopathological examination, and the severity of disease and its impact on quality of life were evaluated by Psoriasis Area and Severity Index (PASI) and Dermatology Life Quality Index (DLQI) scores. Comparisons were made between controls and patients, but also between different clinical types of psoriasis according to disease severity. The rank of C/T alleles for rs550675 (COL9A1 gene) was higher in the patients versus the control group (p = 0.026), while the G/A alleles for rs10204525 (PDCD1 gene) had no differences between the two groups (p = 0.450). Case and control comparisons also showed statistical significance between homozygous CC/TT genotypes (p = 0.039). After subdividing the three types of psoriasis (plaque psoriasis, arthropathic psoriasis and palmoplantar psoriasis) according to disease severity, there were differences between CC/CT genotype (p = 0.0246) and CC/TT (p = 0.007) genotype in patients with plaque psoriasis in favor of severe disease. At the same time, the GA/GG versus AA pattern was significantly higher in patients with plaque psoriasis.
Source: crossref · Quality: baseline

Research context

OpenAlex topics: Psoriasis: Treatment and Pathogenesis · Autoimmune and Inflammatory Disorders Research · Pharmaceutical studies and practices

SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.

Affiliations

Department of Dermatology, University of Medicine and Pharmacy “Victor Babeş”, Eftimie Murgu Sq. No. 2, 300041 Timisoara, Romania

Department of Microscopic Morphology—Genetics, Center of Genomic Medicine, University of Medicine and Pharmacy “Victor Babeş”, Eftimie Murgu Sq. No. 2, 300041 Timisoara, Romania

Department of Medical Informatics and Biostatistics, University of Medicine and Pharmacy “Victor Babeş”, Tudor Vladimirescu St. No. 14, 300172 Timisoara, Romania

References (46)

Show source-provided references
1. Genetics of Psoriasis and Pharmacogenetics of Biological Drugs
2. Capon, F. (2017). The Genetic Basis of Psoriasis. Int. J. Mol. Sci., 18.10.3390/ijms18122526 ↗
3. (2023, July 17). The Online Mendelian Inheritance in Man. Available online: https://www.omim.org/entry/177900.
4. Psoriasis: An Immunogenetic Perspective10.1055/s-0042-1743259 ↗
5. Psoriasis and Genetics10.2340/00015555-3384 ↗
6. Genetic Studies Investigating Susceptibility to Psoriatic Arthritis: A Narrative Review10.1016/j.clinthera.2023.07.003 ↗
7. “Autoinflammatory psoriasis”-genetics and biology of pustular psoriasis10.1038/s41423-020-0519-3 ↗
8. An autoinflammatory disease with deficiency of the interleukin-1–receptor antagonist10.1056/NEJMoa0807865 ↗
9. Berna-Rico, E., Perez-Bootello, J., de Aragon, C.A.-J., and Gonzalez-Cantero, A. (2023). Genetic Influence on Treatment Response in Psoriasis: New Insights into Personalized Medicine. Int. J. Mol. Sci., 24.10.3390/ijms24129850 ↗
10. Verbenko, D.A., Karamova, A.E., Artamonova, O.G., Deryabin, D.G., Rakitko, A., Chernitsov, A., Krasnenko, A., Elmuratov, A., Solomka, V.S., and Kubanov, A.A. (2020). Apremilast Pharmacogenomics in Russian Patients with Moderate-to-Severe and Severe Psoriasis. J. Pers. Med., 11.10.3390/jpm11010020 ↗
11. A Pharmacogenetic Study of Psoriasis Risk Variants in a Greek Population and Prediction of Responses to Anti-TNF-α and Anti-IL-12/23 Agents10.1007/s40291-016-0198-z ↗
12. Association between PDCD1 gene polymorphisms and psoriasis susceptibility in the Chinese population10.1111/ijd.15665 ↗
13. Risk factors for osteoarthritis: Genetics10.1016/j.joca.2003.09.005 ↗
14. Linkage analysis of candidate genes as susceptibility loci for osteoarthritis--suggestive linkage of COL9A1 to female hip osteoarthritis10.1093/rheumatology/39.3.299 ↗
15. (2023, July 18). National Library of Medicine, National Center for Biotechnology Information, Available online: https://www.ncbi.nlm.nih.gov/gene/5133.
16. (2023, July 18). GeneCards The Humane Gene Database. Available online: https://www.genecards.org/cgi-bin/carddisp.pl?gene=COL9A1#expression.
17. National, regional, and worldwide epidemiology of psoriasis: Systematic analysis and modelling study10.1136/bmj.m1590 ↗
18. Pathogenesis of psoriasis in the “omic” era. Part II. Genetic, genomic and epigenetic changes in psoriasis10.5114/ada.2020.96243 ↗
19. Huang, Y.-H., Kuo, C.-F., Huang, L.-H., and Hsieh, M.-Y. (2019). Familial Aggregation of Psoriasis and Co-Aggregation of Autoimmune Diseases in Affected Families. J. Clin. Med., 8.10.3390/jcm8010115 ↗
20. Familial aggregation of moderate to severe plaque psoriasis10.1111/ced.12401 ↗
21. Lessons Learned from Psoriatic Plaques Concerning Mechanisms of Tissue Repair, Remodeling, and Inflammation10.1038/sj.jidsymp.5650010 ↗
22. Distinct bulge stem cell populations maintain the pilosebaceous unit in a β-catenin-dependent manner10.1016/j.isci.2022.105805 ↗
23. Pten loss in Lgr5+ hair follicle stem cells promotes SCC development10.7150/thno.35467 ↗
24. Chen, H., Wang, X., Han, J., Fan, Z., Sadia, S., Zhang, R., Guo, Y., Jiang, Y., and Wu, Y. (2017). AKT and its related molecular feature in aged mice skin. PLoS ONE, 12.10.1371/journal.pone.0178969 ↗
25. Merve, H.M., Sevilay, K., Sibel, O., Başak, B., Ceren, C.G., Demirci, T., and Cüneyt, A. (2017). An Interdisciplinary Approach to Psoriasis, InTech.
26. The Pathogenesis and Genetics of Psoriasis
27. One SNP at a Time: Moving beyond GWAS in Psoriasis10.1016/j.jid.2015.11.025 ↗
28. Candidate gene polymorphisms and risk of psoriasis: A pilot study10.3892/etm.2016.3066 ↗
29. Genetics of psoriasis: A basis for precision medicine10.1093/pcmedi/pbz011 ↗
30. PD1/PD-L1 pathway in psoriasis and psoriatic arthritis: A review10.5114/ada.2021.112274 ↗
31. Recombinant programmed cell death 1 inhibits psoriatic inflammation in imiquimod-treated mice10.3892/ijmm.2020.4612 ↗
32. Anti-PD1/PDL1 induced psoriasis10.1016/j.currproblcancer.2017.10.003 ↗
33. Suppressed Programmed Death 1 Expression on CD4+ and CD8+ T Cells in Psoriatic Patients
34. (2023, August 07). GeneCards The Humane Gene Database. Available online: https://www.genecards.org/cgi-bin/carddisp.pl?gene=COL9A1#aliases_descriptions.
35. (2023, August 07). National Library of Medicine, National Center for Biotechnology Information, Available online: https://www.ncbi.nlm.nih.gov/gene/1297.
36. Collagens of Articular Cartilage: Structure, Function, and Importance in Tissue Engineering10.1615/CritRevBiomedEng.v35.i5.20 ↗
37. Articular cartilage and changes in Arthritis: Collagen of articular cartilage10.1186/ar380 ↗
38. Overview of the molecular determinants contributing to the expression of Psoriasis and Psoriatic Arthritis phenotypes10.1111/jcmm.15742 ↗
39. Caputo, V., Strafella, C., Termine, A., Campione, E., Bianchi, L., Novelli, G., Giardina, E., and Cascella, R. (2020). RNAseq-Based Prioritization Revealed COL6A5, COL8A1, COL10A1 and MIR146A as Common and Differential Susceptibility Biomarkers for Psoriasis and Psoriatic Arthritis: Confirmation from Genotyping Analysis of 1417 Italian Subjects. Int J Mol Sci., 21.10.3390/ijms21082740 ↗
40. Durand, A.L., Dufour, A., Aubert-Foucher, E., Oger-Desfeux, C., Pasdeloup, M., Lustig, S., Servien, E., Vaz, G., Perrier-Groult, E., and Mallein-Gerin, F. (2020). The Lysine Specific Demethylase-1 Negatively Regulates the COL9A1 Gene in Human Articular Chondrocytes. Int. J. Mol. Sci., 21.10.3390/ijms21176322 ↗
41. Epigenetic mechanisms in cartilage and osteoarthritis: DNA methylation, histone modifications and microRNAs10.1016/j.joca.2011.12.012 ↗
42. Association of Reduced Type IX Collagen Gene Expression in Human Osteoarthritic Chondrocytes With Epigenetic Silencing by DNA Hypermethylation10.1002/art.38774 ↗
43. Genetic and Epigenetic Regulation of PD-1 Expression10.4049/jimmunol.1502643 ↗
44. Epigenetic modification of the PD-1 (Pdcd1) promoter in effector CD4+ T cells tolerized by peptide immunotherapy10.7554/eLife.03416 ↗
45. Liang, Y., and Turcan, S. (2022). Epigenetic Drugs and Their Immune Modulating Potential in Cancers. Biomedicines, 10.10.3390/biomedicines10020211 ↗
46. Lupea-Chilom, D.-S., Solovan, C.S., Farcas, S.S., Gogulescu, A., and Andreescu, N.I. (2023). Latent Tuberculosis in Psoriasis Patients on Biologic Therapies: Real-World Data from a Care Center in Romania. Medicina, 59.10.3390/medicina59061015 ↗