Accuracy Analysis of a Next-Generation Tissue Microarray on Various Soft Tissue Samples of Wistar Rats
Source abstract
Abstract
This study aimed to investigate accuracy in different sectional planes of the TMA Grand Master (3DHISTECH) Workstation in various soft tissue samples collected from Wistar rats. A total of 108 animals were sacrificed and 963 tissue specimens collected from 12 soft-tissue types. A total of 3307 tissue cores were punched and transferred into 40 recipient TMA blocks. Digital image analysis was performed. Core loss showed a significant correlation with tissue type and was highest in skin tissue (p < 0.001), renal medulla and femoral artery, nerve, and vein bundle (p < 0.01). Overall, 231 of 3307 tissue cores (7.0%) were lost. Hit rate analysis was performed in 1852 punches. The target was hit completely, partially and missed totally by 89.4%, 7.2% and 2.2%. A total of 54.5% of punches had good accuracy with less than 200 µm deviation from the centre of the targeted region and 92.6% less than 500 µm. Accuracy decreases with greater sectional depth. In the deepest sectional plane of roughly 0.5 mm median depth, almost 90% of cores had a deviation below 500 µm. Recommendations for automated TMA creation are given in this article. The ngTMA®-method has proven accurate and reliable in different soft tissues, even in deeper sectional layers.
Source: crossref · Quality: baseline
Research context
OpenAlex topics: Cell Image Analysis Techniques · Molecular Biology Techniques and Applications · Gene expression and cancer classification
SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.
Affiliations
Department of Oral and Maxillofacial Surgery, Friedrich-Alexander University Erlangen-Nürnberg (FAU), 91054 Erlangen, Germany
Private Office for Maxillofacial Surgery, 91781 Weißenburg, Germany
Department of Pathology, Friedrich-Alexander University Erlangen-Nürnberg (FAU), 91054 Erlangen, Germany
Department of Oral and Maxillofacial Surgery, University of Mainz, 55131 Mainz, Germany
Funding
Deutsche Forschungsgemeinschaft (DFG)
References (35)
Show source-provided references
1. The multitumor (sausage) tissue block: Novel method for immunohistochemical antibody testing
2. Tissue microarrays for high-throughput molecular profiling of tumor specimens10.1038/nm0798-844 ↗
3. Tissue microarrays—Translational biomarker research in the fast lane10.1080/14737159.2018.1522252 ↗
4. Tissue Microarrays in Clinical Oncology10.1016/j.semradonc.2007.10.006 ↗
5. Larger core size has superior technical and analytical accuracy in bladder tissue microarray10.1038/labinvest.2016.151 ↗
6. Tissue Microarray10.1038/jid.2014.277 ↗
7. Guidelines and considerations for conducting experiments using tissue microarrays10.1111/his.12118 ↗
8. Die Tissue Microarray-Technik als neues “high throughput-tool” für den Nachweis differentieller Proteinexpression
9. Tissue microarray (TMA) technology: Miniaturised pathology archives for high-throughput in situ studies10.1002/path.893 ↗
10. Tissue microarray: Physical and chemical parameters involved in the construction of recipient blocks10.5935/1676-2444.20170041 ↗
11. Next-generation tissue microarray (ngTMA) increases the quality of biomarker studies: An example using CD3, CD8, and CD45RO in the tumor microenvironment of six different solid tumor types10.1186/1479-5876-11-104 ↗
12. Tissue Microarrays: Construction and Uses10.1007/978-1-61779-055-3_2 ↗
13. Construction and analysis of tissue microarrays in the era of digital pathology: A pilot study targeting CDX1 and CDX2 in a colon cancer cohort of 612 patients10.1002/cjp2.62 ↗
14. A Next-generation Tissue Microarray (ngTMA) Protocol for Biomarker Studies
15. Programmed death-ligand 1 expression influenced by tissue sample size. Scoring based on tissue microarrays’ and cross-validation with resections, in patients with, stage I–III, non-small cell lung carcinoma of the European Thoracic Oncology Platform Lungscape cohort10.1038/s41379-019-0383-9 ↗
16. A Decade of Tissue Microarrays: Progress in the Discovery and Validation of Cancer Biomarkers10.1200/JCO.2008.17.3567 ↗
17. Epitope Preservation Methods for Tissue Microarrays: Longitudinal Prospective Study10.1093/ajcp/aqx062 ↗
18. The manufacture and assessment of tissue microarrays: Suggestions and criteria for analysis, with breast cancer as an example
19. Tissue microarray is suitable for scientific biomarkers studies in endometrial cancer10.1007/s00428-017-2289-6 ↗
20. Breast Biomarkers-Comparison on Whole Section and Tissue Microarray Section
21. Tissue microarray use for immunohistochemical study of ameloblastoma10.1111/jop.12428 ↗
22. Comparative Evaluation of High-Throughput Small-Core (0.6-mm) and Large-Core (2-mm) Thyroid Tissue Microarray: Is Larger Better?10.5858/arpa.2011-0080-OA ↗
23. Influence of intra-tumoral heterogeneity on the evaluation of BCL2, E-cadherin, EGFR, EMMPRIN, and Ki-67 expression in tissue microarrays from breast cancer10.1080/0284186X.2017.1404128 ↗
24. Loss of enhancer of zeste homologue 2 (EZH2) at tumor invasion front is correlated with higher aggressiveness in colorectal cancer cells10.1007/s00432-019-02977-1 ↗
25. Tissue Microarray Profiling of Cancer Specimens and Cell Lines: Opportunities and Limitations10.1038/labinvest.3780347 ↗
26. Tissue Microarrays and Their Relevance to the Urologist10.1016/S0022-5347(05)00019-4 ↗
27. Clinicopathological indicators of survival among patients with pulmonary carcinoid tumor10.1080/0284186X.2018.1441543 ↗
28. The Prognostic Importance of CD20+ B lymphocytes in Colorectal Cancer and the Relation to Other Immune Cell subsets10.1038/s41598-019-56441-8 ↗
29. Immunophenotypic profile of tumor buds in breast cancer10.1016/j.prp.2017.11.023 ↗
30. Hadgu, E., Seifu, D., Tigneh, W., Bokretsion, Y., Bekele, A., Abebe, M., Sollie, T., Merajver, S.D., Karlsson, C., and Karlsson, M.G. (2018). Breast cancer in Ethiopia: Evidence for geographic difference in the distribution of molecular subtypes in Africa. BMC Women’s Health, 18.10.1186/s12905-018-0531-2 ↗
31. Image-guided Coring for Large-scale Studies in Molecular Pathology10.1097/PAI.0000000000000211 ↗
32. Practical methods for tissue microarray construction
33. Production of tissue microarrays, immunohistochemistry staining and digitalisation within the human protein atlas
34. Comparison of tissue microarray and full section in immunohistochemistry of gastrointestinal stromal tumors10.1111/j.1440-1827.2009.02465.x ↗
35. Tissue microarray is a reliable method for immunohistochemical analysis of pleomorphic adenoma10.1016/j.oooo.2013.08.029 ↗