journal article·2020-11-24Open access

Biological Applications of Short Wavelength Microscopy Based on Compact, Laser-Produced Gas-Puff Plasma Source

Alfio Torrisi, Przemysław W. Wachulak, Andrzej Bartnik, Łukasz Węgrzyński, Tomasz Fok, Henryk Fiedorowicz

Applied Sciences· Volume 10· Issue 23

Abstract

Over the last decades, remarkable efforts have been made to improve the resolution in photon-based microscopes. The employment of compact sources based on table-top laser-produced soft X-ray (SXR) in the “water window” spectral range (λ = 2.3–4.4 nm) and extreme ultraviolet (EUV) plasma allowed to overcome the limitations imposed by large facilities, such as synchrotrons and X-ray free electron lasers (XFEL), because of their high complexity, costs, and limited user access. A laser-plasma double stream gas-puff target source represents a powerful tool for microscopy operating in transmission mode, significantly improving the spatial resolution into the nanometric scale, comparing to the traditional visible light (optical) microscopes. Such an approach allows generating the plasma efficiently, without debris, providing a high flux of EUV and SXR photons. In this review, we present the development and optimization of desktop imaging systems: a EUV and an SXR full field microscope, allowing to achieve a sub-50 nm spatial resolution with short exposure time and an SXR contact microscope, capable to resolve internal structures in a thin layer of sensitive photoresist. Details about the source, as well as imaging results for biological applications, will be presented and discussed.
Source: crossref · Quality: baseline

Research context

OpenAlex topics: Advanced X-ray Imaging Techniques · Advanced Electron Microscopy Techniques and Applications · Advanced Fluorescence Microscopy Techniques

SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.

Affiliations

Nuclear Physics Institute, Czech Academy of Sciences, 25068 Řež, Czech Republic

Institute of Optoelectronics, Military University of Technology, 00-908 Warsaw, Poland

Funding

National Science Centre · Horizon 2020 Programme Laserlab-Europe · National Centre for Research and Development · EU FP7 Erasmus Mundus Joint Doctorate Program EXTATIC · European Commission’s Seventh Framework Program LASER-LAB EUROPE III · European Commission’s Seventh Framework Program LASER-LAB EUROPE IV · COST Action

References (100+)

Show source-provided references
1. Attwood, D.T. (1999). Soft X-rays and Extreme Ultraviolet Radiation, Cambridge University Press (CUP).10.1017/CBO9781139164429 ↗
2. Laser produced plasmas as intense X-ray sources for microscopy at the Central Laser Facility10.1111/j.1365-2818.1985.tb02619.x ↗
3. NBSP (2020, October 26). International Organization for Standardization (ISO). ISO 14813–1:2015. Available online: https://www.iso.org/obp/ui/#iso:std:iso:14813:-1:ed-2:v1:en.
4. Laboratory water-window X-ray microscopy10.1364/OPTICA.393014 ↗
5. Hädrich, S., Rothhardt, J., Krebs, M., Demmler, S., Limpert, J., and Tünnermann, A. (2015, January 4–8). High photon flux and repetition rate table-top EUV sources based on ultrashort pulse fiber lasers. Proceedings of the 2015 IEEE Photonics Conference (IPC), Reston, VA, USA.10.1109/IPCon.2015.7323460 ↗
6. Harmonium: A pulse preserving source of monochromatic extreme ultraviolet (30–110 eV) radiation for ultrafast photoelectron spectroscopy of liquids10.1063/1.4933008 ↗
7. Controlled fabrication of multilayer soft-X-ray mirrors10.1063/1.91759 ↗
8. Microchemical element imaging of yeast and human cells using synchrotron X-ray microprobe with Kirkpatrick−Baez optics10.1021/ac035037r ↗
9. A compound refractive lens for focusing high-energy X-rays
10. Focusing of hard x-rays to 16 nanometers with a multilayer Laue lens10.1063/1.2912503 ↗
11. Real space soft X-ray imaging at 10 nm spatial resolution10.1364/OE.20.009777 ↗
12. Compact X-ray microscope for the water window based on a high brightness laser plasma source10.1364/OE.20.018362 ↗
13. Crossover in the photoionization processes of neon clusters with increasing EUV free-electron-laser intensity10.1103/PhysRevA.88.043203 ↗
14. Development of compact coherent EUV source based on laser Compton scattering10.1016/j.radphyschem.2009.05.006 ↗
15. 7 nm Spatial Resolution in Soft X-ray Microscopy10.1017/S1431927618013697 ↗
16. (2020, October 24). CXRO-Center for X-ray Optics Database, Available online: http://henke.lbl.gov/optical_constants/.
17. Imaging of nanostructures with sub-100 nm spatial resolution using a desktop EUV microscope
18. Fresnel zone plate telescope for condenser alignment in water-window microscope10.1088/2040-8978/17/5/055606 ↗
19. Extreme ultraviolet tomography using a compact laser-plasma source for 3D reconstruction of low density objects10.1364/OL.39.000532 ↗
20. Generation of EUV radiation by plasmonic field enhancement using nano-structured bowties and funnel-waveguides10.1002/andp.201200160 ↗
21. Extreme ultraviolet resist materials for sub-7 nm patterning10.1039/C7CS00080D ↗
22. First stage in the development of a soft-x-ray reflection imaging microscope in the Schwarzschild configuration using a soft-X-ray laser at 182 nm10.1364/OL.17.000157 ↗
23. Nanoimaging with a compact extreme-ultraviolet laser10.1364/OL.30.002095 ↗
24. Single-shot extreme ultraviolet laser imaging of nanostructures with wavelength resolution10.1364/OL.33.000518 ↗
25. Sub-50nm extreme ultraviolet holographic imaging
26. Kasuya, K., Kolacek, K., Schmidt, J., Frolov, O., Straus, J., Matejicek, J., Choukoulov, A., Motokoshi, S., Nakai, M., and Tokunaga, K. (2015, January 15–16). Surface changes of structural materials ablated with nanosecond EUV laser light. Proceedings of the 16th Symposium on Advanced Photon Research, Kizugawa, Kyoto, Japan.
27. Brewer, C., Vaschenko, G., Brizuela, F., Wang, Y., Larotonda, M.A., Luther, B.M., Marconi, M.C., Rocca, J.J., Menoni, C.S., and Chao, W. (2006, January 21–26). Sub-38 nm resolution microscopy with a tabletop 13 nm wavelength laser. Proceedings of the 2006 Conference on Lasers and Electro-Optics and 2006 Quantum Electronics and Laser Science Conference, Long Beach, CA, USA.10.1109/CLEO.2006.4627717 ↗
28. Brilliance improvement of laser-produced soft x-ray plasma by a barrel shock10.1088/1367-2630/14/7/073045 ↗
29. Toward time-resolved soft X-ray microscopy using pulsed fs-high-harmonic radiation10.1016/j.ultramic.2004.09.001 ↗
30. Development of soft X-ray microscopy system using X-ray laser in JAERI Kansai
31. Transverse coherence limited coherent diffraction imaging using a Molybdenum Soft X-ray Laser Pumped at Moderate Pump Energies10.1038/s41598-017-05789-w ↗
32. Self-channelled high harmonic generation of water window soft X-rays10.1088/1361-6455/aad49c ↗
33. Lensless tomographic imaging of near surface structures of frozen hydrated malaria-infected human erythrocytes by coherent X-ray diffraction microscopy10.1038/s41598-017-14586-4 ↗
34. Optimised XUV holography using spatially shaped high harmonic beams10.1364/OE.27.029016 ↗
35. Mixed-state electron ptychography enables sub-angstrom resolution imaging with picometer precision at low dose10.1038/s41467-020-16688-6 ↗
36. Perspective: Towards single shot time-resolved microscopy using short wavelength table-top light sources10.1063/1.5082686 ↗
37. Quantitative X-ray phase-contrast microtomography from a compact laser-driven betatron source10.1038/ncomms8568 ↗
38. Design and performance of a laser-plasma-based compact soft X-ray microscope10.1063/1.1445870 ↗
39. Compact soft X-ray microscope using a gas-discharge light source10.1364/OL.33.002359 ↗
40. A compact laboratory transmission X-ray microscope for the water window
41. High average brightness water window source for short-exposure cryomicroscopy10.1364/OL.37.004425 ↗
42. Table-top soft X-ray microscope using laser-induced plasma from a pulsed gas jet10.1364/OE.22.023489 ↗
43. Three-dimensional localization of nanoscale battery reactions using soft X-ray tomography10.1038/s41467-018-03401-x ↗
44. Cryo-soft X-ray tomography as a quantitative three-dimensional tool to model nanoparticle:cell interaction10.1186/s12951-016-0170-4 ↗
45. Cryo-soft X-ray tomography: Using soft X-rays to explore the ultrastructure of whole cells10.1042/ETLS20170086 ↗
46. Cryo scanning transmission X-ray microscope optimized for spectrotomography10.1063/1.5041009 ↗
47. The next ten years of X-ray science10.1038/nphoton.2016.251 ↗
48. Imaging live cell in micro-liquid enclosure by X-ray laser diffraction10.1038/ncomms4052 ↗
49. Enhanced X-ray emission in the 1-keV range from a laser-irradiated gas puff target produced using the double-nozzle setup
50. Contributed Review: The novel gas puff targets for laser-matter interaction experiments10.1063/1.4962012 ↗
51. Characterization of multi-jet gas puff targets for high-order harmonic generation using EUV shadowgraphy10.1016/j.nimb.2012.05.006 ↗
52. Pulsed X-ray radiography of a gas jet target for laser–matter interaction experiments with the use of a CCD detector10.1016/j.nima.2005.07.047 ↗
53. Development of a compact laser-produced plasma soft X-ray source for radiobiology experiments10.1016/j.nimb.2015.08.065 ↗
54. Spectral investigations of photoionized plasmas induced in atomic and molecular gases using nanosecond extreme ultraviolet (EUV) pulses10.1063/1.4891433 ↗
55. Metrology of Mo/Si multilayer mirrors at 13.5 nm with the use of a laser-produced plasma extreme ultraviolet (EUV) source based on a gas puff target
56. Study of uniformity of elongated plasma channels formed in gas puff targets using extreme ultraviolet and soft X-ray radiation10.1017/S0263034615000105 ↗
57. Extreme ultraviolet and soft X-ray imaging with compact, table top laser plasma EUV and SXR sources10.1016/j.nimb.2015.06.004 ↗
58. A stand-alone compact EUV microscope based on gas-puff target source10.1111/jmi.12494 ↗
59. A “water window” tomography based on a laser-plasma double-stream gas-puff target soft X-ray source
60. Wachulak, P.W., Torrisi, A.L., Nawaz, M.F., Adjei, D., Bartnik, A., Kostecki, J., Wegrzynski, Ł., Vondrová, Š., Turňová, J., and Fok, T. (2015). A compact “water-window” microscope with 60-nm spatial resolution based on a double stream gas-puff target and Fresnel zone plate optics. Proceedings of the EUV and X-ray Optics: Synergy between Laboratory and Space, SPIE-International Society for Optical Engineering.10.1117/12.2181431 ↗
61. Three-dimensional structured on-chip stacked zone plates for nanoscale X-ray imaging with high efficiency10.1007/s12274-014-0419-x ↗
62. Soft X-ray nanoscale imaging using a sub-pixel resolution charge coupled device (CCD) camera10.1063/1.5053593 ↗
63. Development of a laser plasma X-ray microscope to observe live hydrated biological specimens10.1002/lapl.200510074 ↗
64. Nanoscale X-ray imaging10.1038/nphoton.2010.267 ↗
65. In situ observation of cellular organelles with a contact x-ray microscope
66. Soft X-ray imaging of living cells in water: Flash contact soft X-ray microscope10.1016/S0165-9936(04)00735-6 ↗
67. Development and characterization of a laser-plasma soft X-ray source for contact microscopy10.1016/j.nimb.2017.03.082 ↗
68. X-ray laser emission from a laser-irradiated gas puff target
69. Torrisi, A. (2017). Soft X-ray and Extreme Ultraviolet Nanoscale Imaging Using Compact Laser-Plasma Sources based on a Double Stream Gas-Puff Target and Fresnel Optics. [Ph.D. Thesis, Military University of Technology].
70. “Water window” compact, table-top laser plasma soft X-ray sources based on a gas puff target10.1016/j.nimb.2010.02.002 ↗
71. A desktop extreme ultraviolet microscope based on a compact laser-plasma light source
72. Extreme ultraviolet lithography with table top lasers10.1016/j.pquantelec.2010.03.001 ↗
73. Atomic and ionic spectrum lines below 2000 Angstroms: Hydrogen through Krypton Part I (H-Cr)
74. Resolution determination in X-ray microscopy: An analysis of the effects of partial coherence and illumination spectrum
75. Development and optimization of a “water window” microscope based on a gas-puff target laser-produced plasma source10.1051/epjconf/201816703002 ↗
76. Wachulak, P., Torrisi, A., Ayele, M., Czwartos, J., Bartnik, A., Węgrzyński, Ł., Fok, T., Parkman, T., Salačová, Š., and Turňová, J. (2017). Bioimaging using full field and contact EUV and SXR microscopes with nanometer spatial resolution. Appl. Sci., 7.10.3390/app7060548 ↗
77. A compact “Water Window” microscope with 60 nm spatial resolution for applications in biology and nanotechnology10.1017/S1431927615014750 ↗
78. Microradiography and roentgen microscopy
79. Characterization and optimization of images acquired by a compact soft X-ray microscope based on a double stream gas-puff target source10.1088/1748-0221/11/04/C04003 ↗
80. Desktop water window microscope using a double-stream gas puff target source
81. Ayele, M.G. (2018). Soft X-ray Contact Microscopy Using a Laser-Plasma Light Source Based on a Gas Puff Target. [Ph.D. Thesis, Military University of Technology].
82. Development and application of STEM for the biological sciences10.1016/j.ultramic.2012.04.005 ↗
83. Liquid cell transmission electron microscopy and its applications10.1098/rsos.191204 ↗
84. X-ray microscopy with synchrotron radiation
85. Contact microscopy using a compact laser produced plasma soft X-ray Source10.12693/APhysPolA.129.237 ↗
86. Osuchowska, P.N., Wachulak, P., Nowak-Stępniowska, A., Bartnik, A., Gnanachandran, K., Lekka, M., Czwartos, J., Fiedorowicz, H., and Trafny, E.A. (2020). Imaging of cell structures using optimized soft X-ray contact microscopy. Appl. Sci., 10.10.3390/app10196895 ↗
87. Nanoscale imaging using a compact laser plasma source of soft X-rays and Extreme Ultraviolet (EUV)10.1007/978-3-319-73025-7_37 ↗
88. DNA strand breaks induced by soft X-ray pulses from a compact laser plasma source10.1016/j.radphyschem.2015.11.021 ↗
89. Nanoimaging using soft X-ray and EUV sources based on double stream gas puff targets10.12693/APhysPolA.133.271 ↗
90. Nanoimaging using soft X-ray and EUV laser-plasma sources10.1051/epjconf/201816703001 ↗
91. Biological and material science applications of EUV and SXR nanoscale imaging systems based on double stream gas puff target laser plasma sources10.1016/j.nimb.2017.01.035 ↗
92. Tomographic imaging using a compact soft X-ray microscope based on a laser plasma light source
93. (2009, May 20). ImageJ, Available online: http://imagej.nih.gov/ij/.
94. MessaoudiI, C., Boudier, T., Sorzano, C.O.S., and Marco, S. (2007). TomoJ: Tomography software for three-dimensional reconstruction in transmission electron microscopy. BMC Bioinform., 8.10.1186/1471-2105-8-288 ↗
95. Generalized total variation iterative constraint strategy in limited angle optical diffraction tomography10.1364/OE.24.004924 ↗
96. Inverse-scattering theory within the Rytov approximation10.1364/OL.6.000374 ↗
97. A first-order primal-dual algorithm for convex problems with applications to imaging10.1007/s10851-010-0251-1 ↗
98. Evaluation of lab-scale EUV microscopy using a table-top laser source10.1016/j.optcom.2011.05.047 ↗
99. Eschen, W., Tadesse, G.K., Klas, R., Tschernajew, M., Tuitje, F., Spielmann, C., Tünnermann, A., Limpert, J., and Rothhardt, J. (2018). High resolution ptychographic coherent diffractive imaging using table-top XUV sources. Imaging and Applied Optics 2018 (3D, AO, AIO, COSI, DH, IS, LACSEA, LS&C, MATH, pcAOP), Optical Society of America.10.1364/3D.2018.JM3E.4 ↗
100. Time-resolved momentum microscopy with a 1 MHz high-harmonic extreme ultraviolet beamline10.1063/5.0006531 ↗