journal article·2026-02-26Open access

Weakly Supervised Deep Learning for Ocular Image Segmentation: A Systematic Review of Fundus and OCT Methods

Pedro Penedo, Jorge Machado, Rita Anjos, Ana Marta, Aristófanes Corrêa Silva, António Cunha

Applied Sciences· Volume 16· Issue 5

Abstract

Eye diseases, such as glaucoma, diabetic retinopathy, and age-related macular degeneration, drive the growing need for reliable and scalable analyses of fundus and optical coherence tomography (OCT) images. Deep learning performs strongly in ocular structure segmentation. However, it typically relies on dense pixel-wise annotations, which are costly and difficult to obtain at scale. Weakly supervised learning (WSL) can reduce this burden by leveraging coarse labels, limited strong annotations, and unlabeled data. This systematic umbrella review synthesizes survey and review articles on weakly supervised deep learning for image segmentation, with a focus on ocular imaging (fundus and OCT/OCTA). After analyzing twenty-one secondary studies, the main finding reveals an “empty intersection”: WSL-focused segmentation surveys are often modality-agnostic. Conversely, ocular reviews are predominantly fully supervised and seldom offer quantitative evidence on annotation-effort savings or direct comparisons between weak and fully supervised methods on identical datasets. Across the included reviews, label-efficient strategies cluster around CAM/MIL formulations, sparse supervision (points/scribbles/boxes), pseudo-labelling/self-training, and semi-/self-supervised learning, implemented mainly with U-Net/DeepLab families and increasingly Transformer or hybrid backbones. These results provide a structured map of available WSL mechanisms and, critically, identify reproducible reporting gaps that currently prevent fair benchmarking in ocular segmentation. Therefore, this review supports the development of ocular-specific benchmarks and minimum reporting practices that link segmentation performance to annotation effort.
Source: crossref · Quality: baseline

Research context

OpenAlex topics: Retinal Imaging and Analysis · Retinal Diseases and Treatments · Optical Coherence Tomography Applications

SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.

Affiliations

Department of Sciences and Technologies, Universidade Aberta (UAb), 1269-001 Lisboa, Portugal

School Sciences and Technologies, Universidade de Trás-os-Montes e Alto Douro (UTAD), 5000-801 Vila Real, Portugal

Unidade Local de Saúde de São José, 1150-199 Lisboa, Portugal

Unidade Local de Saúde de Santo António, Department of Ophthalmology, 4099-001 Porto, Portugal

Unit for Multidisciplinary Research in Biomedicine, Instituto de Ciências Biomédicas Abel Salazar (ICBAS), Universidade do Porto, 4050-346 Porto, Portugal

Applied Computer Group Department of Electrical Engineering, Federal University of Maranhão, São Luís 65085-580, Brazil

Institute for Systems and Computer Engineering, Technology and Science (INESC TEC), 4200-465 Porto, Portugal

Funding

National Funds

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