journal article·2025-05-30Open access

Unsupervised Feature Selection via a Dual-Graph Autoencoder with l2,1/2-Norm for [68Ga]Ga-Pentixafor PET Imaging of Glioma

Zhichao Song, Meiling Chen, Liang Xie, Xi Fang

Applied Sciences· Volume 15· Issue 11

Abstract

In the era of big data, high-dimensional datasets have become increasingly common in fields such as biometrics, computer vision, and medical imaging. While such data contain abundant information, they are often accompanied by substantial noise, high redundancy, and complex intrinsic structures, posing significant challenges for analysis and modeling. To address these issues, unsupervised feature selection has attracted growing interest due to its ability to handle unlabeled, noisy, and unstructured data. This paper proposes a novel unsupervised feature selection algorithm based on a dual-graph autoencoder (DGA), which combines the powerful data reconstruction capability of autoencoders with the structural preservation strengths of graph regularization. Specifically, the algorithm introduces the l2,1/2-norm and l2,1-norm constraints on the encoder and decoder weight matrices, respectively, to promote feature sparsity and suppress redundancy. Furthermore, an l2,1/2-norm loss term is introduced to enhance robustness against noise and outliers. Two separate adjacency graphs are constructed to capture the local geometric relationships among samples and among features, and their corresponding graph regularization terms are embedded in the training process to retain the intrinsic structure of the data. Experiments on multiple benchmark datasets and [68Ga]Ga-Pentixafor PET/CT glioma imaging data demonstrate that the proposed DGA significantly improves clustering performance and accurately identifies features associated with lesion regions. From a clinical perspective, DGA facilitates more accurate lesion characterization and biomarker identification in glioma patients, thereby offering potential utility in aiding diagnosis, treatment planning, and personalized prognosis assessment.
Source: crossref · Quality: baseline

Research context

OpenAlex topics: Radiomics and Machine Learning in Medical Imaging · Medical Imaging Techniques and Applications · Glioma Diagnosis and Treatment

SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.

Affiliations

School of Mathematics and Statistics, Wuhan University of Technology, Wuhan 430070, China

Funding

Fundamental Research Funds for the Central Universities

References (41)

Show source-provided references
1. Song, L., Smola, A., Gretton, A., Borgwardt, K.M., and Bedo, J. (2007, January 20–24). Supervised feature selection via dependence estimation. Proceedings of the 24th International Conference on Machine Learning, Corvallis, OR, USA.10.1145/1273496.1273600 ↗
2. A review of unsupervised feature selection methods10.1007/s10462-019-09682-y ↗
3. Zhao, Z., and Liu, H. (2007, January 26–28). Semi-supervised feature selection via spectral analysis. Proceedings of the 2007 SIAM International Conference on Data Mining, Minneapolis, MN, USA.10.1137/1.9781611972771.75 ↗
4. Discriminative semi-supervised feature selection via manifold regularization10.1109/TNN.2010.2047114 ↗
5. Zhang, L., Liu, M., Wang, R., Du, T., and Li, J. (2019, January 6–9). Multi-view unsupervised feature selection with dynamic sample space structure. Proceedings of the 2019 IEEE Symposium Series on Computational Intelligence (SSCI), Xiamen, China.10.1109/SSCI44817.2019.9003084 ↗
6. Feature selection: A data perspective
7. Bayesian feature and model selection for Gaussian mixture models10.1109/TPAMI.2006.111 ↗
8. An unsupervised feature selection algorithm based on ant colony optimization10.1016/j.engappai.2014.03.007 ↗
9. Unsupervised feature selection by self-paced learning regularization10.1016/j.patrec.2018.06.029 ↗
10. Feature selection via non-convex constraint and latent representation learning with Laplacian embedding10.1016/j.eswa.2022.118179 ↗
11. Subspace learning for unsupervised feature selection via matrix factorization10.1016/j.patcog.2014.08.004 ↗
12. Unsupervised feature selection based on adaptive similarity learning and subspace clustering10.1016/j.engappai.2020.103855 ↗
13. Graph regularized nonnegative matrix factorization for data representation
14. Li, Z., Yang, Y., Liu, J., Zhou, X., and Lu, H. (2012, January 22–26). Unsupervised feature selection using nonnegative spectral analysis. Proceedings of the AAAI Conference on Artificial Intelligence, Toronto, ON, Canada.
15. Graph autoencoder-based unsupervised feature selection with broad and local data structure preservation10.1016/j.neucom.2018.05.117 ↗
16. Gu, Q., and Zhou, J. (28–1, January 28). Co-clustering on manifolds. Proceedings of the 15th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, Paris, France.
17. Graph dual regularization non-negative matrix factorization for co-clustering10.1016/j.patcog.2011.12.015 ↗
18. Robust unsupervised feature selection by nonnegative sparse subspace learning10.1016/j.neucom.2019.01.015 ↗
19. Han, K., Wang, Y., Zhang, C., Li, C., and Xu, C. (2018, January 15–20). Autoencoder inspired unsupervised feature selection. Proceedings of the 2018 IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP), Calgary, AB, Canada.10.1109/ICASSP.2018.8462261 ↗
20. Unsupervised feature selection via adaptive autoencoder with redundancy control10.1016/j.neunet.2022.03.004 ↗
21. Wang, S., Ding, Z., and Fu, Y. (2017, January 4–9). Feature selection guided auto-encoder. Proceedings of the AAAI Conference on Artificial Intelligence, San Francisco, CA, USA.10.1609/aaai.v31i1.10811 ↗
22. An intrusion detection method based on stacked sparse autoencoder and improved gaussian mixture model10.1016/j.cose.2023.103144 ↗
23. Protein encoder: An autoencoder-based ensemble feature selection scheme to predict protein secondary structure10.1016/j.eswa.2022.119081 ↗
24. Unsupervised feature selection via transformed auto-encoder10.1016/j.knosys.2021.106748 ↗
25. Autoencoder constrained clustering with adaptive neighbors10.1109/TNNLS.2020.2978389 ↗
26. Robust dual-graph discriminative NMF for data classification10.1016/j.knosys.2023.110465 ↗
27. Dual graph regularized latent low-rank representation for subspace clustering10.1109/TIP.2015.2472277 ↗
28. Non-negative spectral learning and sparse regression-based dual-graph regularized feature selection10.1109/TCYB.2017.2657007 ↗
29. Revisiting L2,1-norm robustness with vector outlier regularization10.1109/TNNLS.2020.2964297 ↗
30. Co-regularized unsupervised feature selection10.1016/j.neucom.2017.11.061 ↗
31. Robust nonnegative matrix factorization with structure regularization10.1016/j.neucom.2020.06.049 ↗
32. A unified algorithm for mixed l2,p-minimizations and its application in feature selection10.1007/s10589-014-9648-x ↗
33. Feature selection with ℓ2,1–2 regularization10.1109/TNNLS.2017.2785403 ↗
34. Unsupervised feature selection via nonnegative spectral analysis and redundancy control10.1109/TIP.2015.2479560 ↗
35. Dual-graph regularized non-negative matrix factorization with sparse and orthogonal constraints10.1016/j.engappai.2017.11.008 ↗
36. Unsupervised feature selection via self-paced learning and low-redundant regularization10.1016/j.knosys.2022.108150 ↗
37. Nie, F., Xu, D., Tsang, I.W., and Zhang, C. (2009, January 11–17). Spectral embedded clustering. Proceedings of the IJCAI International Joint Conference on Artificial Intelligence, Pasadena, CA, USA.
38. Yang, Y., Shen, H.T., Ma, Z., Huang, Z., and Zhou, X. (2011, January 16–22). ℓ2, 1-norm regularized discriminative feature selection for unsupervised learning. Proceedings of the IJCAI International Joint Conference on Artificial Intelligence, Barcelona, Spain.
39. Pairwise dependence-based unsupervised feature selection10.1016/j.patcog.2020.107663 ↗
40. Unsupervised feature selection by learning exponential weights10.1016/j.patcog.2023.110183 ↗
41. A dataset of [68Ga] Ga-Pentixafor PET/CT images of patients with high-grade Glioma10.1016/j.dib.2023.109236 ↗