journal article·2022-03-23Open access

On the Reliability of CNNs in Clinical Practice: A Computer-Aided Diagnosis System Case Study

Andrea Loddo, Lorenzo Putzu

Applied Sciences· Volume 12· Issue 7

Abstract

Leukocytes classification is essential to assess their number and status since they are the body’s first defence against infection and disease. Automation of the process can reduce the laborious manual process of review and diagnosis by operators and has been the subject of study for at least two decades. Most computer-aided systems exploit convolutional neural networks for classification purposes without any intermediate step to produce an accurate classification. This work explores the current limitations of deep learning-based methods applied to medical blood smear data. In particular, we consider leukocyte analysis oriented towards leukaemia prediction as a case study. In particular, we aim to demonstrate that a single classification step can undoubtedly lead to incorrect predictions or, worse, to correct predictions obtained with wrong indicators provided by the images. By generating new synthetic leukocyte data, it is possible to demonstrate that the inclusion of a fine-grained method, such as detection or segmentation, before classification is essential to allow the network to understand the adequate information on individual white blood cells correctly. The effectiveness of this study is thoroughly analysed and quantified through a series of experiments on a public data set of blood smears taken under a microscope. Experimental results show that residual networks perform statistically better in this scenario, even though they make correct predictions with incorrect information.
Source: crossref · Quality: baseline

Research context

OpenAlex topics: Digital Imaging for Blood Diseases · AI in cancer detection · Cell Image Analysis Techniques

SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.

Affiliations

Department of Mathematics and Computer Science, University of Cagliari, Via Ospedale 72, 09124 Cagliari, Italy

Department of Electrical and Electronic Engineering, University of Cagliari, Piazza d’Armi, 09123 Cagliari, Italy

References (54)

Show source-provided references
1. Object Detection with Deep Learning: A Review10.1109/TNNLS.2018.2876865 ↗
2. Deeplab: Semantic image segmentation with deep convolutional nets, atrous convolution, and fully connected crfs10.1109/TPAMI.2017.2699184 ↗
3. Ronneberger, O., Fischer, P., and Brox, T. (2015, January 5–9). U-net: Convolutional networks for biomedical image segmentation. Proceedings of the International Conference on Medical Image Computing and Computer-Assisted Intervention, Munich, Germany.10.1007/978-3-319-24574-4_28 ↗
4. Krizhevsky, A., Sutskever, I., and Hinton, G.E. (2012, January 3–6). ImageNet Classification with Deep Convolutional Neural Networks. Proceedings of the 25th International Conference on Neural Information Processing Systems-NIPS’12, Lake Tahoe, NV, USA.
5. Simonyan, K., and Zisserman, A. (2015, January 7–9). Very Deep Convolutional Networks for Large-Scale Image Recognition. Proceedings of the 3rd International Conference on Learning Representations, ICLR 2015, San Diego, CA, USA.
6. A survey on deep learning in medical image analysis10.1016/j.media.2017.07.005 ↗
7. Recent advances in the application of deep learning methods to forestry10.1007/s00226-021-01309-2 ↗
8. A survey of recent advances in CNN-based single image crowd counting and density estimation10.1016/j.patrec.2017.07.007 ↗
9. Ultrasound image enhancement using structure oriented adversarial network10.1109/LSP.2018.2858147 ↗
10. Fine-grained leukocyte classification with deep residual learning for microscopic images10.1016/j.cmpb.2018.05.024 ↗
11. Zhou, B., Khosla, A., Lapedriza, À., Oliva, A., and Torralba, A. (2016, January 27–30). Learning Deep Features for Discriminative Localization. Proceedings of the 2016 IEEE Conference on Computer Vision and Pattern Recognition, CVPR 2016, Las Vegas, NV, USA.10.1109/CVPR.2016.319 ↗
12. Selvaraju, R.R., Cogswell, M., Das, A., Vedantam, R., Parikh, D., and Batra, D. (2017, January 22–29). Grad-CAM: Visual Explanations from Deep Networks via Gradient-Based Localization. Proceedings of the IEEE International Conference on Computer Vision, ICCV 2017, Venice, Italy.10.1109/ICCV.2017.74 ↗
13. Transfer of Learning in the Convolutional Neural Networks on Classifying Geometric Shapes Based on Local or Global Invariants10.3389/fncom.2021.637144 ↗
14. Image quality assessment for determining efficacy and limitations of Super-Resolution Convolutional Neural Network (SRCNN)
15. Trémeau, A., Farinella, G.M., and Braz, J. (2019, January 25–27). Exploring the Limitations of the Convolutional Neural Networks on Binary Tests Selection for Local Features. Proceedings of the 14th International Joint Conference on Computer Vision, Imaging and Computer Graphics Theory and Applications, VISIGRAPP 2019, Volume 4: VISAPP, Prague, Czech Republic.
16. Limits to visual representational correspondence between convolutional neural networks and the human brain
17. Sabottke, C.F., and Spieler, B.M. (2020). The Effect of Image Resolution on Deep Learning in Radiography. Radiol. Artif. Intell., 2.10.1148/ryai.2019190015 ↗
18. Genovese, A., Hosseini, M.S., Piuri, V., Plataniotis, K.N., and Scotti, F. (2021, January 6–11). Acute lymphoblastic leukemia detection based on adaptive unsharpening and deep learning. Proceedings of the ICASSP, IEEE International Conference on Acoustics, Speech and Signal Processings, Toronto, ON, Canada.10.1109/ICASSP39728.2021.9414362 ↗
19. Human-level recognition of blast cells in acute myeloid leukaemia with convolutional neural networks10.1038/s42256-019-0101-9 ↗
20. Automated blast cell detection for Acute Lymphoblastic Leukemia diagnosis10.1016/j.bspc.2021.102690 ↗
21. Automated detection of Leukemia by Pretrained Deep Neural Networks and Transfer Learning: A comparison10.1016/j.medengphy.2021.10.006 ↗
22. An efficient deep Convolutional Neural Network based detection and classification of Acute Lymphoblastic Leukemia10.1016/j.eswa.2021.115311 ↗
23. Vogado, L., Veras, R., Aires, K., Araújo, F., Silva, R., Ponti, M., and Tavares, J. (2021). Diagnosis of leukaemia in blood slides based on a fine-tuned and highly generalisable deep learning model. Sensors, 21.10.3390/s21092989 ↗
24. Improving blood cells classification in peripheral blood smears using enhanced incremental training10.1016/j.compbiomed.2021.104265 ↗
25. Acute lymphoblastic leukemia presenting with gross hematuria10.1093/pch/12.7.573 ↗
26. National Cancer Institute (2021, June 11). Leukemia, Available online: https://www.cancer.gov/types/leukemia/hp.
27. Uniform approach to risk classification and treatment assignment for children with acute lymphoblastic leukemia10.1200/JCO.1996.14.1.18 ↗
28. Acute myeloid leukaemia: How to combine multiple tools10.1111/ijlh.12831 ↗
29. Epidemiological patterns of leukaemia in 184 countries: A population-based study10.1016/S2352-3026(17)30232-6 ↗
30. Medicine, Y. (2022, March 01). Diagnosing Leukemia. Available online: https://www.yalemedicine.org/conditions/leukemia-diagnosis.
31. National Cancer Institute (2022, March 01). Adult Acute Lymphoblastic Leukemia Treatment, Available online: https://www.cancer.gov/types/leukemia/patient/adult-all-treatment-pdq.
32. Automatic detection and quantification of WBCs and RBCs using iterative structured circle detection algorithm10.1155/2014/979302 ↗
33. A leucocytes count system from blood smear images Segmentation and counting of white blood cells based on learning by sampling10.1007/s00138-016-0812-4 ↗
34. Blood cells extraction using color based segmentation technique
35. Gupta, A., and Gupta, R. (2019). ISBI 2019 C-NMC Challenge: Classification in Cancer Cell Imaging, Springer Nature.10.1007/978-981-15-0798-4 ↗
36. Detection of red and white blood cells from microscopic blood images using a region proposal approach10.1016/j.compbiomed.2019.103530 ↗
37. Acute Lymphoblastic Leukemia Detection and Classification of Its Subtypes Using Pretrained Deep Convolutional Neural Networks10.1177/1533033818802789 ↗
38. Semerjian, S., Khong, Y.F., and Mirzaei, S. (2021, January 5–7). White Blood Cells Classification Using Built-in Customizable Trained Convolutional Neural Network. Proceedings of the 2021 International Conference on Emerging Smart Computing and Informatics (ESCI), Pune, India.10.1109/ESCI50559.2021.9396781 ↗
39. Attention-Aware Residual Network Based Manifold Learning for White Blood Cells Classification10.1109/JBHI.2020.3012711 ↗
40. Classification of white blood cells using deep features obtained from Convolutional Neural Network models based on the combination of feature selection methods10.1016/j.asoc.2020.106810 ↗
41. Classification of white blood cells using weighted optimized deformable convolutional neural networks10.1080/21691401.2021.1879823 ↗
42. Acute leukemia classification using convolution neural network in clinical decision support system
43. Cancer Treatment Centers of America (2021, June 11). Types of Leukemia. Available online: https://www.cancercenter.com/cancer-types/leukemia/types.
44. Institute, N.C. (2021, November 16). Childhood Acute Lymphoblastic Leukemia Treatment, Available online: https://www.cancer.gov/types/leukemia/patient/child-all-treatment-pdq.
45. Labati, R.D., Piuri, V., and Scotti, F. (2011, January 11–14). All-IDB: The acute lymphoblastic leukemia image database for image processing. Proceedings of the IEEE ICIP International Conference on Image Processing, Brussels, Belgium.10.1109/ICIP.2011.6115881 ↗
46. Nikolenko, S. (2021). Synthetic Data for Deep Learning, Springer International Publishing AG.10.1007/978-3-030-75178-4 ↗
47. Meharban, M., Sabu, M., and Krishnan, S. (2021, January 19–20). Introduction to Medical Image Synthesis Using Deep Learning:A Review. Proceedings of the 2021 7th International Conference on Advanced Computing and Communication Systems, ICACCS 2021, Coimbatore, India.10.1109/ICACCS51430.2021.9442041 ↗
48. He, K., Zhang, X., Ren, S., and Sun, J. (July, January 26). Deep Residual Learning for Image Recognition. Proceedings of the 2016 IEEE Conference on Computer Vision and Pattern Recognition (CVPR), Las Vegas, NV, USA.10.1109/CVPR.2016.90 ↗
49. Szegedy, C., Liu, W., Jia, Y., Sermanet, P., Reed, S., Anguelov, D., Erhan, D., Vanhoucke, V., and Rabinovich, A. (2015, January 7–12). Going deeper with convolutions. Proceedings of the 2015 IEEE Conference on Computer Vision and Pattern Recognition (CVPR), Boston, MA, USA.10.1109/CVPR.2015.7298594 ↗
50. Szegedy, C., Vanhoucke, V., Ioffe, S., Shlens, J., and Wojna, Z. (July, January 26). Rethinking the Inception Architecture for Computer Vision. Proceedings of the 2016 IEEE Conference on Computer Vision and Pattern Recognition (CVPR), Las Vegas, NV, USA.10.1109/CVPR.2016.308 ↗
51. Zhang, X., Zhou, X., Lin, M., and Sun, J. (2018, January 18–22). ShuffleNet: An Extremely Efficient Convolutional Neural Network for Mobile Devices. Proceedings of the 2018 IEEE Conference on Computer Vision and Pattern Recognition, CVPR 2018, Salt Lake City, UT, USA.10.1109/CVPR.2018.00716 ↗
52. Sandler, M., Howard, A.G., Zhu, M., Zhmoginov, A., and Chen, L. (2018, January 18–22). MobileNetV2: Inverted Residuals and Linear Bottlenecks. Proceedings of the 2018 IEEE Conference on Computer Vision and Pattern Recognition, CVPR 2018, Salt Lake City, UT, USA.10.1109/CVPR.2018.00474 ↗
53. Deng, J., Dong, W., Socher, R., Li, L.J., Li, K., and Li, F.-F. (2009, January 20–25). Imagenet: A large-scale hierarchical image database. Proceedings of the Computer Vision and Pattern Recognition (CVPR), Miami, FL, USA.10.1109/CVPR.2009.5206848 ↗
54. Deep Convolutional Neural Networks for Computer-Aided Detection: CNN Architectures, Dataset Characteristics and Transfer Learning10.1109/TMI.2016.2528162 ↗