Show source-provided references
1. American Psychiatric Association (2022). Diagnostic and Statistical Manual of Mental Disorders, American Psychiatric Association Publishing. [5th ed.].
10.1176/appi.books.9780890425787 ↗5. Cortical and subcortical brain morphometry differences between patients with autism spectrum disorder and healthy individuals across the lifespan: Results from the ENIGMA ASD working group
10.1176/appi.ajp.2017.17010100 ↗8. Padmanabhan, A., Lynch, C.J., Schaer, M., and Menon, V. (2017). The Default Mode Network in Autism. Biol. Psychiatry Cogn. Neurosci. Neuroimaging, 2.
10.1016/j.bpsc.2017.04.004 ↗10. Glutamate and GABA in autism spectrum disorder-a translational magnetic resonance spectroscopy study in man and rodent models
10.1038/s41398-018-0155-1 ↗11. Test Review: Autism Diagnostic Observation Schedule, Second Edition (ADOS-2) Manual (Part II): Toddler Module
10.1177/0734282913490916 ↗12. Kim, S.H., Hus, V., and Lord, C. (2013). Autism Diagnostic Interview-Revised. Encyclopedia of Autism Spectrum Disorders, Springer.
10.1007/978-1-4419-1698-3_894 ↗13. Annual Research Review: Looking back to look forward—Changes in the concept of autism and implications for future research
10.1111/jcpp.13176 ↗15. Biomarkers in Autism Spectrum Disorder: Challenges, Advances, and the Need for Biomarkers of Relevance to Public Health
10.1176/appi.focus.20170047 ↗19. Decoding tumour phenotype by noninvasive imaging using a quantitative radiomics approach
21. A radiomics-based comparative study on arterial spin labeling and dynamic susceptibility contrast perfusion-weighted imaging in gliomas
10.1038/s41598-020-62658-9 ↗22. T2-FLAIR, DWI and DKI radiomics satisfactorily predicts histological grade and Ki-67 proliferation index in gliomas
23. Morphometric and radiomics analysis toward the prediction of epilepsy associated with supratentorial low-grade glioma in children
10.1186/s40644-025-00881-1 ↗25. Early Intervention for Children With Autism Spectrum Disorder Under 3 Years of Age: Recommendations for Practice and Research
10.1542/peds.2014-3667E ↗27. Accuracy of machine learning algorithms for the diagnosis of autism spectrum disorder: Systematic review and meta-analysis of brain magnetic resonance imaging studies
10.2196/14108 ↗28. Advancements in automated diagnosis of autism spectrum disorder through deep learning and resting-state functional mri biomarkers: A systematic review
10.1007/s11571-024-10176-z ↗29. AI-based non-invasive imaging technologies for early autism spectrum disorder diagnosis: A short review and future directions
10.1016/j.artmed.2025.103074 ↗30. Khodatars, M., Shoeibi, A., Sadeghi, D., Ghaasemi, N., Jafari, M., Moridian, P., Khadem, A., Alizadehsani, R., Zare, A., and Kong, Y. (2021). Deep learning for neuroimaging-based diagnosis and rehabilitation of Autism Spectrum Disorder: A review. Comput. Biol. Med., 139.
10.1016/j.compbiomed.2021.104949 ↗31. Alharthi, A.G., and Alzahrani, S.M. (2023). Do it the transformer way: A comprehensive review of brain and vision transformers for autism spectrum disorder diagnosis and classification. Comput. Biol. Med., 167.
10.1016/j.compbiomed.2023.107667 ↗32. Ma, R., Huang, Y., Pan, Y., Wang, Y., and Wei, Y. (2024, January 22–25). Meta-data Study in Autism Spectrum Disorder Classification Based on Structural MRI. Proceedings of the 15th ACM International Conference on Bioinformatics, Computational Biology and Health Informatics, Shenzhen, China.
10.1145/3698587.3701416 ↗33. Diagnostic model generated by MRI-derived brain features in toddlers with autism spectrum disorder
10.1002/aur.1711 ↗34. Chaddad, A., Desrosiers, C., Hassan, L., and Tanougast, C. (2017). Hippocampus and amygdala radiomic biomarkers for the study of autism spectrum disorder. BMC Neurosci., 18.
10.1186/s12868-017-0373-0 ↗35. Multi-scale radiomic analysis of sub-cortical regions in MRI related to autism, gender and age
10.1038/srep45639 ↗36. Tang, S., Nie, L., Liu, X., Chen, Z., Zhou, Y., Pan, Z., and He, L. (2022). Application of Quantitative Magnetic Resonance Imaging in the Diagnosis of Autism in Children. Front. Med., 9.
10.3389/fmed.2022.818404 ↗39. Multichannel Deep Attention Neural Networks for the Classification of Autism Spectrum Disorder Using Neuroimaging and Personal Characteristic Data
10.1155/2020/1357853 ↗40. Thomas, R.M., Gallo, S., Cerliani, L., Zhutovsky, P., El-Gazzar, A., and van Wingen, G. (2020). Classifying Autism Spectrum Disorder Using the Temporal Statistics of Resting-State Functional MRI Data With 3D Convolutional Neural Networks. Front. Psychiatry, 11.
10.3389/fpsyt.2020.00440 ↗44. QUADAS-2: A Revised Tool for the Quality Assessment of Diagnostic Accuracy Studies Evaluation of QUADAS, a tool for the quality assessment of diagnostic accuracy studies
10.7326/0003-4819-155-8-201110180-00009 ↗45. Zheng, Q., Nan, P., Cui, Y., and Li, L. (2025). ConnectomeAE: Multimodal brain connectome-based dual-branch autoencoder and its application in the diagnosis of brain diseases. Comput. Methods Programs Biomed., 267.
10.1016/j.cmpb.2025.108801 ↗46. Performance of machine learning classification models of autism using resting-state fMRI is contingent on sample heterogeneity
10.1007/s00521-020-05193-y ↗48. Functional connectivity classification of autism identifies highly predictive brain features but falls short of biomarker standards
10.1016/j.nicl.2014.12.013 ↗50. Soussia, M., and Rekik, I. (2018). Unsupervised Manifold Learning Using High-Order Morphological Brain Networks Derived From T1-w MRI for Autism Diagnosis. Front. Neuroinform, 12.
10.3389/fninf.2018.00070 ↗51. Dekhil, O., Mohamed, A., El-Nakieb, Y., Shalaby, A., Soliman, A., Switala, A., Ali, M., Ghazal, M., Hajjdiab, H., and Casanova, M.F. (2019). A Personalized Autism Diagnosis CAD System Using a Fusion of Structural MRI and Resting-State Functional MRI Data. Front. Psychiatry, 10.
10.3389/fpsyt.2019.00392 ↗52. Spera, G., Retico, A., Bosco, P., Ferrari, E., Palumbo, L., Oliva, P., Muratori, F., and Calderoni, S. (2019). Evaluation of altered functional connections in male children with autism spectrum disorders on multiple-site data optimized with machine learning. Front. Psychiatry, 10.
10.3389/fpsyt.2019.00620 ↗53. Kazeminejad, A., and Sotero, R.C. (2019). Topological properties of resting-state FMRI functional networks improve machine learning-based autism classification. Front. Neurosci., 13.
10.3389/fnins.2018.01018 ↗54. Chaitra, N., Vijaya, P.A., and Deshpande, G. (2020). Diagnostic prediction of autism spectrum disorder using complex network measures in a machine learning framework. Biomed. Signal Process Control, 62.
10.1016/j.bspc.2020.102099 ↗55. Automatic classification of autism spectrum disorder in children using cortical thickness and support vector machine
10.1002/brb3.2238 ↗56. Autism classified by magnetic resonance imaging: A pilot study of a potential diagnostic tool
10.1002/mpr.1846 ↗57. Lundberg, S.M., and Lee, S.-I. (2017, January 4–9). A Unified Approach to Interpreting Model Predictions. Proceedings of the 31st Conference on Neural Information Processing Systems (NIPS 2017), Long Beach, CA, USA.
58. Chen, H., Liu, X., Luo, X., Fu, J., Zhou, K., Wang, N., Li, Y., and Geng, D. (2024). An automated hybrid approach via deep learning and radiomics focused on the midbrain and substantia nigra to detect early-stage Parkinson’s disease. Front. Aging Neurosci., 16.
10.3389/fnagi.2024.1397896 ↗59. Deep learning–radiomics integrated noninvasive detection of epidermal growth factor receptor mutations in non-small cell lung cancer patients
60. A small number of abnormal brain connections predicts adult autism spectrum disorder
10.1038/ncomms11254 ↗61. Twinned neuroimaging analysis contributes to improving the classification of young people with autism spectrum disorder
10.1038/s41598-024-71174-z ↗63. Zhao, F., Zhang, H., Rekik, I., An, Z., and Shen, D. (2018). Diagnosis of Autism Spectrum Disorders Using Multi-Level High-Order Functional Networks Derived From Resting-State Functional MRI. Front. Hum. Neurosci., 12.
10.3389/fnhum.2018.00184 ↗64. SAE-based classification of school-aged children with autism spectrum disorders using functional magnetic resonance imaging
10.1007/s11042-018-5625-1 ↗65. Wang, Z., Peng, D., Shang, Y., and Gao, J. (2021). Autistic Spectrum Disorder Detection and Structural Biomarker Identification Using Self-Attention Model and Individual-Level Morphological Covariance Brain Networks. Front. Neurosci., 15.
10.3389/fnins.2021.756868 ↗66. Li, H., Parikh, N.A., and He, L. (2018). A novel transfer learning approach to enhance deep neural network classification of brain functional connectomes. Front. Neurosci., 12.
10.3389/fnins.2018.00491 ↗67. Efficient Interpretation of Deep Learning Models Using Graph Structure and Cooperative Game Theory: Application to ASD Biomarker Discovery
69. Yang, X., Islam, M.S., and Khaled, A.M.A. (2019, January 19–22). Functional connectivity magnetic resonance imaging classification of autism spectrum disorder using the multisite ABIDE dataset. Proceedings of the 2019 IEEE EMBS International Conference on Biomedical and Health Informatics, BHI 2019—Proceedings, Chicago, IL, USA.
10.1109/BHI.2019.8834653 ↗70. Sherkatghanad, Z., Akhondzadeh, M., Salari, S., Zomorodi-Moghadam, M., Abdar, M., Acharya, U.R., Khosrowabadi, R., and Salari, V. (2020). Automated Detection of Autism Spectrum Disorder Using a Convolutional Neural Network. Front. Neurosci., 13.
10.3389/fnins.2019.01325 ↗71. Sewani, H., and Kashef, R. (2020). An Autoencoder-Based Deep Learning Classifier for Efficient Diagnosis of Autism. Children, 7.
10.3390/children7100182 ↗74. Ahammed, M.S., Niu, S., Ahmed, M.R., Dong, J., Gao, X., and Chen, Y. (2021). DarkASDNet: Classification of ASD on Functional MRI Using Deep Neural Network. Front. Neuroinform, 15.
10.3389/fninf.2021.635657 ↗75. Gao, J., Chen, M., Li, Y., Gao, Y., Li, Y., Cai, S., and Wang, J. (2021). Multisite Autism Spectrum Disorder Classification Using Convolutional Neural Network Classifier and Individual Morphological Brain Networks. Front. Neurosci., 14.
10.3389/fnins.2020.629630 ↗76. Almuqhim, F., and Saeed, F. (2021). ASD-SAENet: A Sparse Autoencoder, and Deep-Neural Network Model for Detecting Autism Spectrum Disorder (ASD) Using fMRI Data. Front. Comput. Neurosci., 15.
10.3389/fncom.2021.654315 ↗77. Single-participant structural similarity matrices lead to greater accuracy in classification of participants than function in autism in MRI
10.1186/s13229-021-00439-5 ↗78. EAG-RS: A Novel Explainability-guided ROI-Selection Framework for ASD Diagnosis via Inter-regional Relation Learning
10.1109/TMI.2023.3337362 ↗79. Vidya, S., Gupta, K., Aly, A., Wills, A., Ifeachor, E., and Shankar, R. (2025, June 20). Explainable AI for Autism Diagnosis: Identifying Critical Brain Regions Using fMRI Data. Available online: https://arxiv.org/pdf/2409.15374.
80. Khan, K., and Katarya, R. (2025). MCBERT: A multi-modal framework for the diagnosis of autism spectrum disorder. Biol. Psychol., 194.
10.1016/j.biopsycho.2024.108976 ↗81. Ashraf, A., Zhao, Q., Bangyal, W.H., Raza, M., and Iqbal, M. (2025). Female autism categorization using CNN based NeuroNet57 and ant colony optimization. Comput. Biol. Med., 189.
10.1016/j.compbiomed.2025.109926 ↗82. Manikantan, K., and Jaganathan, S. (2023). A Model for Diagnosing Autism Patients Using Spatial and Statistical Measures Using rs-fMRI and sMRI by Adopting Graphical Neural Networks. Diagnostics, 13.
10.3390/diagnostics13061143 ↗83. Song, J., Chen, Y., Yao, Y., Chen, Z., Guo, R., Yang, L., Sui, X., Wang, Q., Li, X., and Cao, A. (2025, March 31). Combining Radiomics and Machine Learning Approaches for Objective ASD Diagnosis: Verifying White Matter Associations with ASD. Available online: https://arxiv.org/abs/2405.16248v1.
84. Ali, M.T., ElNakieb, Y., Elnakib, A., Shalaby, A., Mahmoud, A., Ghazal, M., Yousaf, J., Abu Khalifeh, H., Casanova, M., and Barnes, G. (2022). The Role of Structure MRI in Diagnosing Autism. Diagnostics, 12.
10.3390/diagnostics12010165 ↗85. A Framework for Comparison and Interpretation of Machine Learning Classifiers to Predict Autism on the ABIDE Dataset
10.1002/hbm.70190 ↗86. Characterizing ASD Subtypes Using Morphological Features from sMRI with Unsupervised Learning
87. He, C., Cortes, J., Ding, Y., Shan, X., Zou, M., Chen, H., Chen, H., Wang, X., and Duan, X. (2025). Combining functional, structural, and morphological networks for multimodal classification of developing autistic brains. Brain Imaging Behav., 1–13.
10.1007/s11682-025-01026-5 ↗