journal article·2025-01-26Open access

Predicting the Aquatic Toxicity of Pharmaceutical and Personal Care Products: A Multitasking Modeling Approach

Amit Kumar Halder, Tanushree Pradhan, M. Natália D. S. Cordeiro

Applied Sciences· Volume 15· Issue 3

Abstract

Pharmaceutical and Personal Care Products (PPCPs) have become a significant environmental concern due to their widespread use, persistence, and potential toxicity, often referred to as forever chemicals. This study aims to develop and validate robust in silico models for predicting the aquatic toxicity of PPCPs. To do so, we resorted to the ECOTOX database and employed a Python-based tool to prepare and curate the dataset. Multitasking Quantitative Structure–Toxicity Relationship (mt-QSTR) models were then developed employing the Box–Jenkins moving average approach, incorporating both linear and non-linear frameworks based on diverse feature selection algorithms and machine learning techniques. To further improve the external predictivity, a consensus modeling approach was also implemented. The most accurate model achieved an overall predictive accuracy exceeding 85%, providing valuable insights into the structural features influencing PPCP toxicity. Key factors contributing to high aquatic toxicity included high lipophilicity, mass density, molecular mass, and reduced electronegativity. This work offers a foundation for designing safer PPCPs with reduced environmental impact, aligning with sustainable chemical development goals.
Source: crossref · Quality: baseline

Research context

OpenAlex topics: Computational Drug Discovery Methods · Pharmaceutical Quality and Counterfeiting · Pesticide Residue Analysis and Safety

SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.

Affiliations

LAQV@REQUIMTE, Faculty of Sciences, University of Porto, 4169-007 Porto, Portugal

Dr. B. C. Roy College of Pharmacy and Allied Health Sciences, Dr. Meghnad Saha Sarani, Bidhannagar, Durgapur 713206, West Bengal, India

Funding

PT national funds (FCT/MCTES, Fundação para a Ciência e Tecnologia and Ministério da Ciência, Tecnologia e Ensino Superior)

References (37)

Show source-provided references
1. Pharmaceuticals and personal care products in the aquatic environment in China: A review10.1016/j.jhazmat.2013.08.040 ↗
2. Ecotoxicological effects, environmental fate and risks of pharmaceutical and personal care products in the water environment: A review10.1016/j.scitotenv.2021.147819 ↗
3. Pharmaceuticals and personal care products as emerging environmental contaminants: Prevalence, toxicity, and remedial approaches10.1021/acs.chas.3c00071 ↗
4. Pharmaceuticals and personal care products and their sublethal and lethal effects in aquatic organisms10.1139/er-2020-0054 ↗
5. Chinen, K., and Malloy, T. (2022). Multi-strategy assessment of different uses of QSAR under REACH analysis of alternatives to advance information transparency. Int. J. Environ. Res. Public Health, 19.10.3390/ijerph19074338 ↗
6. A review of quantitative structure-activity relationship modelling approaches to predict the toxicity of mixtures10.1016/j.comtox.2022.100251 ↗
7. Predicting the ecotoxicity of endocrine disruptive chemicals: Multitasking in silico approaches towards global models10.1016/j.scitotenv.2023.164337 ↗
8. Deep learning driven QSAR model for environmental toxicology: Effects of endocrine disrupting chemicals on human health10.1016/j.envpol.2019.06.081 ↗
9. Ensemble QSAR modeling to predict multispecies fish toxicity lethal concentrations and points of departure10.1021/acs.est.9b03957 ↗
10. Development of a nano-QSAR model for predicting the toxicity of nano-metal oxide mixtures to Aliivibrio fischeri10.1039/D2EN00672C ↗
11. Probing the environmental toxicity of deep eutectic solvents and their components: An in silico modeling approach10.1021/acssuschemeng.9b01306 ↗
12. Filling environmental data gaps with QSPR for ionic liquids: Modeling n-octanol/water coefficient10.1016/j.jhazmat.2015.10.023 ↗
13. QSTR and interspecies-QSTR modelling for aquatic toxicity data gap filling of cationic polymers10.1016/j.comtox.2021.100181 ↗
14. Quantitative structure-activity relationship models for the reaction rate coefficients between dissolved organic matter and PPCPs10.1016/j.jhazmat.2023.131845 ↗
15. The ECOTOXicology knowledgebase: A curated database of ecologically relevant toxicity tests to support environmental research and risk assessment10.1002/etc.5324 ↗
16. Halder, A.K., Moura, A.S., and Cordeiro, M.N.D.S. (2022). Moving average-based multitasking in silico classification modeling: Where do we stand and what is next?. Int. J. Mol. Sci., 23.10.3390/ijms23094937 ↗
17. Online chemical modeling environment (OCHEM): Web platform for data storage, model development and publishing of chemical information10.1007/s10822-011-9440-2 ↗
18. ULYSSES: An efficient and easy to use semiempirical library for C++10.1021/acs.jcim.2c00757 ↗
19. QSAR-Co-X: An open source toolkit for multitarget QSAR modelling10.1186/s13321-021-00508-0 ↗
20. QSAR-Co: An open source software for developing robust multitasking or multitarget classification-based QSAR models10.1021/acs.jcim.9b00295 ↗
21. A comparison of some methods of cluster analysis10.2307/2528417 ↗
22. A comparison of maximum covariance and K-means cluster analysis in classifying cases into known taxon groups10.1037/1082-989X.7.2.245 ↗
23. K-means cluster analysis of characteristic patterns of allergen in different ages: Real life study10.1002/clt2.12281 ↗
24. Scikit-learn: Machine learning in python
25. Nearest neighbor pattern classification10.1109/TIT.1967.1053964 ↗
26. Random forests10.1023/A:1010933404324 ↗
27. Upper bounds on the number of hidden neurons in feedforward networks with arbitrary bounded nonlinear activation functions10.1109/72.655045 ↗
28. Greedy function approximation: A gradient boosting machine10.1214/aos/1013203451 ↗
29. An introduction to ROC analysis10.1016/j.patrec.2005.10.010 ↗
30. Zou, Q., Boughorbel, S., Jarray, F., and El-Anbari, M. (2017). Optimal classifier for imbalanced data using Matthews Correlation Coefficient metric. PLoS ONE, 12.10.1371/journal.pone.0177678 ↗
31. On a simple approach for determining applicability domain of QSAR models10.1016/j.chemolab.2015.04.013 ↗
32. Identifying natural compounds as multi-target-directed ligands against Alzheimer’s disease: An in silico approach10.1080/07391102.2018.1456975 ↗
33. An Electrotopological-state Index for Atoms in Molecules10.1023/A:1015952613760 ↗
34. Solvation Model based on weighted solvent accessible surface area10.1021/jp0102318 ↗
35. The Whim Theory: New 3D molecular descriptors for QSAR in environmental modelling10.1080/10629369708039126 ↗
36. WHIM descriptors of shape10.1002/qsar.200510159 ↗
37. Estimation of 2D autocorrelation descriptors and 2D Monte Carlo descriptors as a tool to build up predictive models for acetylcholinesterase (AChE) inhibitory activity10.1016/j.chemolab.2018.11.008 ↗