Early Ventricular Fibrillation Prediction Based on Topological Data Analysis of ECG Signal
Source abstract
Abstract
Early ventricular fibrillation (VF) prediction is critical for prevention of sudden cardiac death, and can improve patient survival. Generally, electrocardiogram (ECG) signal features are extracted to predict VF, a process which plays an important role in prediction accuracy. Therefore, this study first proposes a novel feature based on topological data analysis (TDA) to improve the accuracy of early ventricular fibrillation prediction. Firstly, the heart activity is regarded as a cardiac dynamical system, which is described by phase space reconstruction. Then the topological structure of the phase space is characterized with persistent homology, and its statistical features are further extracted and defined as TDA features. Finally, 60 subjects (30 VF, 30 healthy) from three public ECG databases are used to validate the prediction performance of the proposed method. Compared to heart rate variability features and box-counting features, TDA features achieve a superior accuracy of 91.7%. Additionally, the three types of features are combined as fusion features, achieving the optimal accuracy of 95.0%. The fusion features are then ranked, and the first seven components are all from the TDA features. It follows that the proposed features provide a significant effect in improving the predictive performance of early VF.
Source: crossref · Quality: baseline
Research context
OpenAlex topics: Computational Drug Discovery Methods · Traditional Chinese Medicine Studies · Functional Brain Connectivity Studies
SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.
Affiliations
College of Medicine and Biological Information Engineering, Northeastern University, Shenyang 110169, China
Funding
National Natural Science Foundation of China · Fundamental Research Funds for the Central Universities · Northeastern University’s 15th session (2020) Innovation Training Program for College Students
References (44)
Show source-provided references
1. Sudden Cardiac Death10.1161/01.CIR.98.21.2334 ↗
2. Genetics of sudden cardiac death10.1161/CIRCRESAHA.116.304030 ↗
3. Predicting Ventricular Fibrillation Through Deep Learning10.1109/ACCESS.2020.3042782 ↗
4. Mandala, S., and Senar, M.S. (2020). ECG-based prediction algorithm for imminent malignant ventricular arrhythmias using decision tree. PLoS ONE, 15.10.1371/journal.pone.0231635 ↗
5. An optimal strategy for prediction of sudden cardiac death through a pioneering feature-selection approach from HRV signal10.1016/j.cmpb.2018.12.001 ↗
6. Machine learning approach to predict ventricular fibrillation based on QRS complex shape10.3389/fphys.2019.01193 ↗
7. Prediction of spontaneous ventricular tachyarrhythmia by an artificial neural network using parameters gleaned from short-term heart rate variability10.1016/j.eswa.2011.09.097 ↗
8. Early detection of sudden cardiac death using nonlinear analysis of heart rate variability10.1016/j.bbe.2018.06.003 ↗
9. Investigating Phase Space Reconstruction of ECG for Prediction of Malignant Ventricular Arrhythmia10.30880/ijie.2020.12.02.022 ↗
10. Detection of Ventricular Arrhythmia by using Heart rate variability signal and ECG beat image10.1016/j.bspc.2021.102692 ↗
11. Heart Rate Variability as predictive factor for Sudden Cardiac Death10.18632/aging.101386 ↗
12. Optimal length of heart rate variability data and forecasting time for ventricular fibrillation prediction using machine learning10.1155/2021/6663996 ↗
13. QRS complex enlargement as a predictor of ventricular arrhythmias in patients affected by surgically treated tetralogy of Fallot: A comprehensive literature review and historical overview
14. Riasi, A., and Mohebbi, M. (2015, January 3–5). Prediction of ventricular tachycardia using morphological features of ECG signal. Proceedings of the International Symposium on Artificial Intelligence & Signal Processing, Mashhad, Iran.10.1109/AISP.2015.7123515 ↗
15. Applying nonlinear dynamics to ECG signal processing10.1109/51.664037 ↗
16. Small, M. (2005). Applied Nonlinear Time Series Analysis: Applications in Physics, Physiology and Finance, World Scientific.10.1142/9789812567772 ↗
17. Detecting Ventricular Fibrillation by Time-Delay Methods10.1109/TBME.2006.880909 ↗
18. A Statistical Index for Early Diagnosis of Ventricular Arrhythmia from the Trend Analysis of ECG Phase-portraits10.1088/0967-3334/36/1/107 ↗
19. Prompt and accurate diagnosis of ventricular arrhythmias with a novel index based on phase space reconstruction of ECG10.1016/j.ijcard.2014.12.067 ↗
20. Chaotic based reconstructed phase space features for detecting ventricular fibrillation10.1016/j.bspc.2010.05.003 ↗
21. CREI-GARD, a new concept in computerized arrhythmia monitoring systems
22. Greenwald, S.D. (1986). Development and Analysis of a Ventricular Fibrillation Detector. [Master’s Thesis, MIT Dept of Electrical Engineering and Computer Science].
23. Use of the ECG signal database CARDIODAT of PTB via the Internet
24. Takens, F. (1981). Detecting strange attractors in turbulence. Dynamical Systems and Turbulence, Warwick, 1980, Springer.10.1007/BFb0091924 ↗
25. Geometry from a Time Series10.1103/PhysRevLett.45.712 ↗
26. The analysis of observed chaotic data in physical systems10.1103/RevModPhys.65.1331 ↗
27. Independent coordinates for strange attractors from mutual information10.1103/PhysRevA.33.1134 ↗
28. Reconstruction expansion as a geometry-based framework for choosing proper delay times10.1016/0167-2789(94)90226-7 ↗
29. Extracting qualitative dynamics from experimental data10.1016/0167-2789(86)90031-X ↗
30. Determining embedding dimension for phase-space reconstruction using a geometrical construction10.1103/PhysRevA.45.3403 ↗
31. Applications of Topological Data Analysis in Oncology10.3389/frai.2021.659037 ↗
32. Nonlinear dynamic approaches to identify atrial fibrillation progression based on topological methods10.1016/j.bspc.2019.101563 ↗
33. SimBa: An Efficient Tool for Approximating Rips-Filtration Persistence via Simplicial Batch-Collapse10.1145/3284360 ↗
34. Kantz, H., and Schreiber, T. (2004). Nonlinear Time Series Analysis, Cambridge University Press.10.1017/CBO9780511755798 ↗
35. Using mutual information for selecting features in supervised neural net learning10.1109/72.298224 ↗
36. Wang, Y., and Zhou, C. (2020, January 25–27). Feature selection method based on chi-square test and minimum redundancy. Proceedings of the International Conference on Intelligent and Interactive Systems and Applications, Shanghai, China.10.1007/978-3-030-63784-2_22 ↗
37. Minimum redundancy feature selection from microarray gene expression data10.1142/S0219720005001004 ↗
38. Estimation of the information by an adaptive partitioning of the observation space10.1109/18.761290 ↗
39. Leo, B., Jerome, H.F., and Richard, A. (1984). Classification and Regression Trees, CRC Press. [1st ed.].
40. Regression Trees with Unbiased Variable Selection and Interaction Detection
41. Split Selection Methods for Classification Trees
42. Overcoming the myopia of inductive learning algorithms with RELIEFF10.1023/A:1008280620621 ↗
43. Robnik-Šikonja, M., and Kononenko, I. (1997, January 8–12). An adaptation of Relief for attribute estimation in regression. Proceedings of the Fourteenth International Conference on Machine Learning, Nashville, TN, USA.
44. Theoretical and empirical analysis of ReliefF and RReliefF10.1023/A:1025667309714 ↗