journal article·2017-06-27Open access

Differentiating Authentic Adenophorae Radix from Its Adulterants in Commercially-Processed Samples Using Multiplexed ITS Sequence-Based SCAR Markers

Byeong Moon, Wook Kim, Kyeong Han, Sungyu Yang, Youngmin Kang, Inkyu Park, Renzhe Piao

Applied Sciences· Volume 7· Issue 7

Abstract

Determining the precise botanical origin of a traditional herbal medicine is important for basic quality control. In both the Chinese and Korean herbal pharmacopoeia, authentic Adenophorae Radix is defined as the roots of Adenophora stricta and Adenophora triphylla. However, the roots of Codonopsis lanceolata, Codonopsis pilosula, and Glehnia littoralis are frequently distributed as Adenophorae Radix in Korean herbal markets. Unfortunately, correctly identifying dried roots is difficult using conventional methods because the roots of those species are morphologically similar. Therefore, we developed DNA-based markers for the identification of authentic Adenophorae Radix and its common adulterants in commercially-processed samples. To develop a reliable method to discriminate between Adenophorae Radix and its adulterants, we sequenced the nuclear ribosomal DNA internal transcribed spacers (nrDNA-ITS) and designed sequence-characterized amplified region (SCAR) primers specific to the authentic and adulterant species. Using these primers, we developed SCAR markers for each species and established a multiplex-PCR method that can authenticate the four herbal medicines in a single PCR reaction. Furthermore, we confirmed that commercially-processed herbal medicines, which often have degraded DNA, could be assessed with our method. Therefore, our method is a reliable genetic tool to protect against adulteration and to standardize the quality of Adenophorae Radix.
Source: crossref · Quality: baseline

Research context

OpenAlex topics: Food Quality and Safety Studies · Molecular Biology Techniques and Applications · Ecology and Conservation Studies

SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.

Affiliations

K-herb Research Center, Korea Institute of Oriental Medicine, Daejeon 34054, Korea

Department of Agronomy, Yanbian University Agriculture College, Yanji 133002, China

Funding

Ministry of Science, ICT, and Future Planning of Korea

References (34)

Show source-provided references
1. Ali, M.A., Gyulai, G., and Al-Hermaid, F. (2015). Plant DNA Barcoding and Phyogenetics, LAP LAMBERT Academic Publishing.
2. A Note on Unintentional Adulterations in Ayurvedic Herbs
3. Authentication of Commercial Processed Glehniae Radix (Beishashen) by DNA Barcodes10.1186/s13020-015-0071-8 ↗
4. Genetic Distinction of Radix Adenophorae from Its Adulterants by the DNA Sequence of 5S-rRNA Spacer Domains10.1142/S0192415X03001612 ↗
5. Quantitative and Classification Analyses of Lupenone and β-Sitosterol by GC-FID in Adenophora triphylla var. japonica Hara and Codonopsis lanceolata
6. (2017, April 10). The Plant List. Available online: http://www.theplantlist.org/tpl1.1/search?q=adenophora.
7. (2017, April 10). Defining Dictionary for Medicinal Herbs. Available online: http://boncho.kiom.re.kr/herbarium/codex.php.
8. Discrimination and Genetic Relationship of Adenophora triphylla (Thunb) A. DC. var. japonica Hara and Codonopsis lanceolata Trauty Using RAPD Analysis
9. A Study on a Morphological Identification of Adenophora triphylla var. japonica, Codonopsis lanceolata, Adenophora remotiflora and Codonopsis pilosula
10. Bensky, D., Clavey, S., Stoger, E., and Gamble, A. (1993). Chinese Herbal Medicine Materia Medica, Eastland Press.
11. Study on the Anti-oxidative Effects of Adenophorae Radix, Codonopsis lanceolatae Radix and Glehniae Radix cum Rhizoma on Liver Cells Isolated from Oxidatively Stressed Rat
12. Austerlitz, F., David, O., Schaeffer, B., Bleakley, K., Olteanu, M., Leblois, R., Veuille, M., and Laredo, C. (2009). DNA Barcode Analysis: A Comparison of Phylogenetic and Statistical Classification Methods. BMC Bioinform., 10.10.1186/1471-2105-10-S14-S10 ↗
13. DNA Barcoding: An Efficient Tool to Overcome Authentication Challenges in the Herbal Market10.1111/pbi.12419 ↗
14. A Renaissance in Herbal Medicine Identification: From Morphology to DNA10.1016/j.biotechadv.2014.07.004 ↗
15. Genome-based Approaches to the Authentication of Medicinal Plants10.1055/s-2008-1074517 ↗
16. Hollingsworth, P.M., Graham, S.W., and Little, D.P. (2011). Choosing and Using a Plant DNA Barcode. PLoS ONE, 6.10.1371/journal.pone.0019254 ↗
17. Moon, B.C., Kim, W.J., Ji, Y., Lee, Y.M., Kang, Y.M., and Choi, G. (2016). Molecular Identification of the Traditional Herbal Medicines, Arisaematis Rhizoma and Pinelliae Tuber, and Common Adulterants via Universal DNA Barcode Sequences. Genet. Mol. Res., 15.10.4238/gmr.15017064 ↗
18. A DNA Barcode for Land Plants10.1073/pnas.0905845106 ↗
19. Refining the DNA Barcode for Land Plants10.1073/pnas.1116812108 ↗
20. Yao, H., Song, J., Liu, C., Luo, K., Han, J., Li, Y., Pang, X., Xu, H., Zhu, Y., and Xiao, P. (2010). Use of ITS2 Region as the Universal DNA Barcode for Plants and Animals. PLoS ONE, 5.10.1371/journal.pone.0013102 ↗
21. Comparison of ITS Sequence Analysis and RAPD-Derived Molecular Markers10.3390/molecules201219861 ↗
22. Kim, W.J., Moon, B.C., Yang, S., Han, K.S., Choi, G., and Lee, A.Y. (2016). Rapid Authentication of the Herbal Medicine Plant Species Aralia continentalis Kitag. and Angelica biserrata CQ Yuan and RH Shan Using ITS2 Sequences and Multiplex-SCAR Markers. Molecules, 21.10.3390/molecules21030270 ↗
23. Authentication of Bulbus Fritillariae Cirrhosae by RAPD-derived DNA Markers10.3390/molecules19033450 ↗
24. RAPD-SCAR Markers: An Interface Tool for Authentication of Traits
25. Molecular Authentication of Pinelliae Tuber and Its Common Adulterants Using RAPD-derived Multiplex Sequence Characterized Amplified Region (multiplex-SCAR) Markers
26. Development of Molecular Markers for Authentication of the Medicinal Plant Species Patrinia by Random Smplified Polymorphic DNA (RAPD) Analysis and Multiplex-PCR10.1007/s13580-016-0064-2 ↗
27. Kim, W.J., Ji, Y., Choi, G., Kang, Y.M., Yang, S., and Moon, B.C. (2016). Molecular Identification and Phylogenetic Analysis of Important Medicinal Plant Species in Genus Paeonia Based on rDNA-ITS, matK, and rbcL DNA Barcode Sequences. Genet. Mol. Res., 15.10.4238/gmr.15038472 ↗
28. White, T.J., Bruns, T., Lee, S., and Taylor, J. (1990). PCR Protocols: A Guide to Methods and Applications, Academic Press.
29. BioEdit: A User-friendly Biological Sequence Alignment Editor and Analysis Program for Windows 95/98/NT
30. MEGA6: Molecular Evolutionary Genetics Analysis Version 6.010.1093/molbev/mst197 ↗
31. BOLD: The Barcode of Life Data10.1111/j.1471-8286.2007.01678.x ↗
32. Chloroplast Genomes: Diversity, Evolution, and Applications in Genetic Engineering10.1186/s13059-016-1004-2 ↗
33. Särkinen, T., Staats, M., Richardson, J.E., Cowan, R.S., and Bakker, F.T. (2012). How to Open the Treasure Chest? Optimising DNA Extraction from Herbarium Dpecimens. PLoS ONE, 7.10.1371/journal.pone.0043808 ↗
34. Molecular Phylogenetic Position of Adenophora racemosa, an Endemic Species in Korea