journal article·2024-12-12Open access

Seed Biotechnologies in Practicing Sustainable Agriculture: Insights and Achievements in the Decade 2014–2024

Pragya Tiwari, Kyeung-Il Park

Applied Sciences· Volume 14· Issue 24

Abstract

While agricultural crops remain at the forefront of addressing global food demands and malnutrition, depleting resources, fluctuating climatic conditions, and the adverse impact of biotic/abiotic stresses define a major challenge. Plant seeds comprise an important starting material for plant propagation, in vitro generation, and conservation, and are crucial factors in determining the quality and yield of the desired crops. The expanding horizon of precision agriculture suggests that high-quality seeds could promote crop productivity up to 15–20 percent, attributed to emerging biotechnological innovations in seed science and research. In addition, seed science comprises an integral aspect of sustainable development goals (SDGs), and plays a crucial role in Climate Action (SDG 13) and Zero hunger (SDG 2). While synthetic seed technologies highlight prospects in the propagation and conservation of key plant species, seed biopriming to address environmental stresses is innovative in climate-smart agriculture. The article discusses key developments in advanced seed biotechnologies, ranging from nano-enabled seed treatments to the non-coding RNA-mediated determination of seed traits and genetic manipulation of seeds for quality improvement. Research employing multi-omics, bioinformatics, and seed biopharming for the enhanced production of high-value metabolites is opening new avenues in seed biology and biotechnology research.
Source: crossref · Quality: baseline

Research context

OpenAlex topics: Plant tissue culture and regeneration · Seed and Plant Biochemistry · Legume Nitrogen Fixing Symbiosis

SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.

Affiliations

Department of Horticulture and Life Science, Yeungnam University, Gyeongsan 38541, Republic of Korea

References (100+)

Show source-provided references
1. Breeding crops to feed 10 billion10.1038/s41587-019-0152-9 ↗
2. Green revolution: Impacts, limits, and the path ahead10.1073/pnas.0912953109 ↗
3. Crop biotechnology and the future of food10.1038/s43016-020-0072-3 ↗
4. On the road to breeding 4.0: Unraveling the good, the bad, and the boring of crop quantitative genomics10.1146/annurev-genet-120116-024846 ↗
5. Tiwari, P., Khare, T., Shriram, V., Bae, H., and Kumar, V. (2021). Plant synthetic biology for producing potent phyto-antimicrobials to combat antimicrobial resistance. Biotechnol. Adv., 48.10.1016/j.biotechadv.2021.107729 ↗
6. Debnath, S., Elgorban, A.M., Bahkali, A.H., Eswaramoorthy, R., Verma, M., Tiwari, P., Wang, S., Wong, L.S., and Syed, A. (2023). Exploring the efficacy of 1-amino-cyclopropane-1-carboxylic acid (ACCA) as a natural compound in strengthening maize resistance against biotic and abiotic stressors: An empirical computational study. Front. Microbiol., 14.10.3389/fmicb.2023.1232086 ↗
7. Production of effective phyto-antimicrobials via metabolic engineering strategies10.2174/1568026622666220310104645 ↗
8. Constructing a farm level indicator of sustainable agricultural practice10.1016/S0921-8009(01)00245-2 ↗
9. Novel approaches and practices to sustainable agriculture
10. Legume-derived bioactive peptides10.1007/978-3-030-53017-4_2 ↗
11. Das, S., Ray, M.K., Panday, D., and Mishra, P.K. (2023). Role of biotechnology in creating sustainable agriculture. PLOS Sustain. Transform., 2.10.1371/journal.pstr.0000069 ↗
12. Tiwari, P., and Park, K.-I. (2024). Advanced fungal biotechnologies in accomplishing sustainable development goals (SDGs): What do we know and what comes next?. J. Fungi, 10.10.3390/jof10070506 ↗
13. Sarsariya, S., Yadav, A.N., Tiwari, P., and Singh, R. (2024). Futuristic plant microbes biotechnology and bioengineering. Front. Microbiol., 15.10.3389/fmicb.2024.1514583 ↗
14. Seeds of resilience: The contribution of commons-based plant breeding and seed production to the social-ecological resilience of the agricultural sector10.1080/14735903.2021.1963598 ↗
15. Role of seed and its technological innovations in Indian agricultural sector10.21786/bbrc/9.4/8 ↗
16. Rustagi, A., and Chaudhry, B. (2021). Seed priming: An interlinking technology between seeds, seed germination and seedling establishment. Plant Reproductive Ecology-Recent Advances, IntechOpen.
17. Bahadur, B., Rajam, M.V., Sahijiram, L., and Krishnamurthy, K.V. (2015). Seed Biology and Technology. Plant Biology and Biotechnology: Volume I: Plant Diversity, Organization, Function and Improvement, Springer.10.1007/978-81-322-2286-6 ↗
18. First the seed: Genomic advances in seed science for improved crop productivity and food security10.1002/csc2.20402 ↗
19. Biotechnological interventions for improving the seed longevity in cereal crops: Progress and prospects10.1080/07388551.2022.2027863 ↗
20. Cardarelli, M., Woo, S.L., Rouphael, Y., and Colla, G. (2022). Seed treatments with microorganisms can have a biostimulant effect by influencing germination and seedling growth of crops. Plants, 11.10.3390/plants11030259 ↗
21. Tiwari, A.K. (2020). Advances in Seed Production and Management, Springer Nature.10.1007/978-981-15-4198-8 ↗
22. Utilization of computer vision and multispectral imaging techniques for classification of cowpea (Vigna unguiculata) seeds10.1186/s13007-019-0411-2 ↗
23. SeedGerm: A cost-effective phenotyping platform for automated seed imaging and machine learning based phenotypic analysis of crop seed germination10.1111/nph.16736 ↗
24. Modelling the vigor of maize seeds submitted to accelerated aging based on ATR-FTIR data and chemometric tools (PCA, HCA and PLS-DA)10.1016/j.heliyon.2020.e03477 ↗
25. A causal gene for seed dormancy on wheat chromosome 4 A encodes a MAP Kinase Kinase10.1016/j.cub.2016.01.063 ↗
26. Alanine aminotransferase control seed dormancy in barley10.1038/ncomms11625 ↗
27. ABI5 is a regulator of seed maturation and longevity in legumes10.1105/tpc.16.00470 ↗
28. Genome-edited triple-recessive mutation alters seed dormancy in wheat10.1016/j.celrep.2019.06.090 ↗
29. Rice Protein 1-isoasprtyl methyltransferase isoforms differentially accumulate during seed maturation to restrict deleterious isoAsp and reactive oxygen species accumulation and are implicated in seed vigor and longevity10.1111/nph.13923 ↗
30. Kanai, M., Yamada, T., Hayashi, M., Mano, S., and Nishimura, M. (2019). Soybean (Glycine max L.) triacylglycerol lipase GmSDP1 regulates the quality and quantity of seed oil. Sci. Rep., 9.10.1038/s41598-019-45331-8 ↗
31. Wu, Y., and Messing, J. (2014). Proteome balancing of the maize seed for higher nutritional value. Front. Plant Sci., 5.10.3389/fpls.2014.00240 ↗
32. Kambhapati, S., Aznar-Moreno, J.A., Hostetler, C., Caso, T., Bailey, S.R., Hubbard, A.H., Durrett, T.P., and Allen, D.K. (2020). On the inverse correlation of protein and oil: Examining the effects of altered central carbon metabolism on seed composition using soybean fast neutron mutants. Metabolites, 10.10.3390/metabo10010018 ↗
33. The grain yield modulator miR156 regulates seed dormancy through the gibberellin pathway in rice10.1038/s41467-019-11830-5 ↗
34. Belin, E., Douarre, C., Gillard, N., Farnconi, F., Rojas-Varela, J., Chapeau-Blondeau, F., Demilly, D., Adrein, J., Maire, E., and Rousseau, D. (2018). Evaluation of 3D/2D imaging and image processing techniques for the monitoring of seed imbibition. J. Imaging, 4.10.3390/jimaging4070083 ↗
35. Increasing seed size and quality by manipulating BIG SEEDS1 in legume species10.1073/pnas.1611763113 ↗
36. Molecular networks of seed size control in plants10.1146/annurev-arplant-050718-095851 ↗
37. Shorthypocotyl Under Blue1 or Haiku2 mixepression alters canola and Arabidopsis seed development10.1111/nph.13632 ↗
38. Seed priming: An emerging tool towards sustainable agriculture10.1007/s10725-021-00761-1 ↗
39. Molecular farming using transgenic rice endosperm10.1016/j.tibtech.2022.04.002 ↗
40. An overview of national and international seed quality assurance systems and strategies for energizing seed production chain of field crops
41. Biotechnological approaches in seed quality enhancement: Current status and future prospects
42. Seed genetic purity for quality seed production
43. Agarwal, D.K., Rajendra Prasad, S., Natarajan, S., and Sripathy, K.V. (2015). Seed biotechnology: Emerging tools and technology for a paradigm shift in enhancing agricultural productivity and value addition—Retrospectives and Perspectives. DSR—3 Decades of AICRP-NSP (Crops), DSR.
44. Biotechnology, biofortification, and global health10.1177/15648265050264S309 ↗
45. Seed vigour and crop establishment: Extending performance beyond adaptation10.1093/jxb/erv490 ↗
46. Seed coats: Structure, development, composition, and biotechnology10.1079/IVP2005686 ↗
47. Dadlani, M., and Yadava, D.K. (2023). Seed quality: Variety development to planting—An overview. Seed Science and Technology, Springer.10.1007/978-981-19-5888-5 ↗
48. Genetic purity of Sunflower hybrids determined on the basis of isozymes and seed storage proteins10.2298/HEL0848047N ↗
49. Mapping quantitative trait loci controlling seed longevity in rice (Oryza sativa L.)10.1007/s00122-002-0872-x ↗
50. Oxygen interacts with priming, moisture content and temperature to affect the longevity of lettuce and onion seeds10.1017/S0960258511000080 ↗
51. Hui, Y.H., Khachatourians, G.G., McHughen, A., Nip, W.K., and Scorza, R. (2002). Parent-of-origin effects and seed development: Genetics and epigenetics. The handbook of Transgenic Plants Crops, Marcel Dekker, Inc.10.1201/9780203910979 ↗
52. Seed biology in the 21st century: Perspectives and new directions10.1093/pcp/pcr184 ↗
53. Wambugu, P.W., Nyamongo, D.O., and Kirwa, E.C. (2023). Role of seed banks in supporting ecosystem and biodiversity conservation and restoration. Diversity, 15.10.3390/d15080896 ↗
54. CBD (2010). Strategic Plan for Biodiversity 2011–2020 and the Aichi Targets, Secretariat of the Convention on Biological Diversity.
55. CBD (2023, June 01). COP 15: Nations Adopt Four Goals, 23 Targets for 2030 in Landmark UN Biodiversity Agreement. Available online: https://www.cbd.int/article/cop15-cbd-press-release-final-19dec2022.
56. Community participation, and ecological criteria for selecting species and restoring natural capital with native species in the Sahel10.1111/rec.12337 ↗
57. Ethical seed sourcing is a key issue in meeting global restoration targets10.1016/j.cub.2018.11.015 ↗
58. Seeding the future–the issues of supply and demand in restoration in Australia10.1111/emr.12148 ↗
59. Seed production areas for the global restoration challenge10.1002/ece3.2455 ↗
60. FAO (2010). Second Report on the World’s Plant Genetic Resources for Food and Agriculture, FAO.
61. Ex situ collections and their potential for the restoration of extinct plants10.1111/cobi.13391 ↗
62. The contribution of botanic gardens to ex-situ conservation through seed banking10.1016/j.pld.2017.11.005 ↗
63. Tiwari, A.K. (2020). Improvement of seed quality: A biotechnological approach. Advances in Seed Production and Management, Springer.10.1007/978-981-15-4198-8 ↗
64. Molecular mechanisms of photoinhibition in plants: A review
65. Bao, J. (2019). Biotechnology for rice grain quality improvement. Rice, Elsevier.10.1016/B978-0-12-811508-4.00014-9 ↗
66. Application and potential use of advanced biotechnology techniques in agriculture and zoology10.18782/2582-2845.8702 ↗
67. Mondal, S., Gayen, D., and Karmakar, S. (2020). Improvement of nutritional quality of rice seed through classical breeding and advanced genetic engineering. Rice Research for Quality Improvement: Genomics and Genetic Engineering: Volume 2: Nutrient Biofortification and Herbicide and Biotic Stress Resistance in Rice, Springer.10.1007/978-981-15-5337-0_23 ↗
68. Estimation of combining ability for within-boll yield components in upland Cotton (Gossypium hirsutum)
69. Smart Grain: High throughput phenotyping software for measuring seed shape through image analysis10.1104/pp.112.205120 ↗
70. GrainScan: A low-cost, fast method for grain size and color measurements10.1186/1746-4811-10-23 ↗
71. High throughput scoring of seed germination10.1007/978-1-4939-6469-7_7 ↗
72. A machine vision platform for measuring imbibition of maize kernels: Quantification of genetic effects and correlations with germination10.1186/s13007-018-0383-7 ↗
73. A case of need: Linking traits to genebank accessions10.1089/bio.2018.0033 ↗
74. D’Argenio, V. (2018). The high-throughput analyses era: Are we ready for the data struggle?. High Throughput, 7.10.3390/ht7010008 ↗
75. Statistical contributions to bioinformatics: Design, modeling, structure learning, and integration10.1177/1471082X17698255 ↗
76. Faisal, M., and Alatar, A. (2019). An introduction to synthetic seeds: Production, techniques, and applications. Synthetic Seeds, Springer.10.1007/978-3-030-24631-0 ↗
77. Rihan, H.Z., Kareem, F., El-Mahrouk, M.E., and Fuller, M.P. (2017). Artificial seeds-principle, aspects and applications. Agronomy, 7.10.3390/agronomy7040071 ↗
78. Development of synthetic seed technology in plants and its applications: A review
79. Artificial seed production in seedless plants
80. From somatic embryo to synthetic seed in Citrus sp. through the encapsulation technology10.1007/978-1-4939-3061-6_30 ↗
81. Assessment of genetic stability of Cucumis sativus L. regenerated from encapsulated shoot tips10.1016/j.scienta.2014.01.015 ↗
82. Synthetic seed preparation, germination and plantlet regeneration of Litchi (Litchi chinensis Sonn.)10.4236/ajps.2016.710133 ↗
83. Improved protocol for somatic embryogenesis and calcium alginate encapsulation in Anethum graveolens L.: A medicinal herb10.1007/s12010-014-1032-x ↗
84. Optimization of synthetic seed production in MM.106 apple rootstocks from somatic embryos and axillary buds
85. Optimization of the conditions for production of synthetic seeds by encapsulation of axillary buds derived from mini tuber sprouts in potato (Solanum tuberosum)10.1007/s11240-016-1013-6 ↗
86. Synthetic seeds production and the induction of organogenesis in blackberry (Rubua glaucus Benth)
87. Establishment of efficient in vitro culture and plantlet generation of Tomato (Lycopersicon esculentum Mill.) and development of synthetic seeds
88. Devika, O.S., Singh, S., Sarkar, D., Barnwal, P., Suman, J., and Rakshit, A. (2021). Seed priming: A potential supplement in integrated resource management under fragile intensive ecosystems. Front. Sustain. Food Syst., 5.10.3389/fsufs.2021.654001 ↗
89. Kumar, S., Arutselvan, R., Greeshma, K., Bodhankar, S., ·Akash, A.U., Krishna Prasad, V.S.S., Nehela, Y., Singh, U.B., Bhupenchandra, I., and Sen, A. (2024). Unraveling the seed bio-priming contours for managing plant health. J. Plant Growth Reg.10.1007/s00344-024-11277-z ↗
90. Seed biopriming as a promising approach for stress tolerance and enhancement of crop productivity: A review10.1002/jsfa.13048 ↗
91. Tiwari, P., Kang, S., and Bae, H. (2023). Plant-endophyte associations: Rich yet under-explored sources for novel bioactive compounds and applications. Microbiol. Res., 266.10.1016/j.micres.2022.127241 ↗
92. Erwin, D.J. (2023). Endophyte-mediated bioremediation- an efficient biological strategy in ecological subsistence and agriculture. Endophytic and Arbuscular Mycorrhizal Fungi and their Role in Sustainable Agriculture, Nova Publishers.
93. Tiwari, P. (2022). Plant-associated endophytes: Molecular mechanisms and significance in promoting sustainable agriculture. Endophytes: Types, Potential Uses, and Mechanisms of Action, Nova Publishers.10.52305/JETR3242 ↗
94. Dufosse, L., and Tiwari, P. (2024). Emerging trends and advances in socio-economic applications of beneficial microbes. Front. Microbiol., 15.10.3389/fmicb.2024.1523569 ↗
95. Tiwari, P., Bose, S.K., Park, K.-I., Dufosse, L., and Fouillaud, M. (2024). Plant-microbe interactions under the extreme habitats and their potential applications. Microorganisms, 12.10.3390/microorganisms12030448 ↗
96. Tiwari, P., and Bae, H. (2023). Trends in harnessing plant Endophytic microbiome for heavy metal mitigation in plants: A perspective. Plants, 12.10.3390/plants12071515 ↗
97. Antimicrobials from Endophytes as novel therapeutics to counter drug-resistant pathogens10.1080/07388551.2024.2342979 ↗
98. Seed bio-priming with microbial inoculants: A tailored approach towards improved crop performance, nutritional security, and agricultural sustainability for smallholder farmers10.1016/j.crsust.2021.100093 ↗
99. Bio-priming seed treatment for biological control of Pythium ultimum pre-emergence damping off in sweet corn10.1094/PD-74-0368 ↗
100. Mahmood, A., and Kataoka, R. (2020). Metabolite profiling reveals a complex response of plants to the application of plant growth-promoting endophytic bacteria. Microbiol. Res., 234.10.1016/j.micres.2020.126421 ↗