journal article·2024-03-29Open access

Identification of Black Spot Resistance in Broccoli (Brassica oleracea L. var. italica) Germplasm Resources

Quan Zhang, Ferdinando Branca, Ning Li, Ning Liu, Yunhua Ding

Applied Sciences· Volume 14· Issue 7

Abstract

Black spot disease, caused by Alternaria alternata, results in enormous losses in broccoli production. The current measures to prevent black spot disease mainly rely on seed disinfection and chemical control, but excellent disease-resistance resources are relatively scarce. In this study, we screened primers for black spot disease identification and conducted black spot disease resistance identification of 173 lines, including 70 hybrid lines and 103 inbred lines. Based on the phenotype, we have set five grades to present different symptoms of illness: high disease resistance, disease resistance, disease tolerance, susceptibility, and high susceptibility (the disease resistance gradually weakens). According to our phenotypic evaluations, 3, 55, 65, 45, and 5 lines were classified into high disease resistance, disease resistance, disease tolerance, susceptible, and high susceptibility, respectively. By comparing the proportion of resistant lines between hybrid and inbred lines, we noticed that the frequency of hybrid varieties with high disease resistance and disease resistance (28.57%) was lower than that in inbred lines (36.89%), indicating that the resistance resources have not yet been effectively utilized in hybrid broccoli breeding. Therefore, our results identified the resistance resources to black spot disease in broccoli, which lays the foundation for the exploration of disease resistance genes as well as the analysis of disease resistance mechanisms in the future.
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Research context

OpenAlex topics: Plant Disease Resistance and Genetics · Plant Pathogens and Fungal Diseases · Plant Pathogens and Resistance

SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.

Affiliations

State Key Laboratory of Vegetable Biobreeding, National Engineering Research Center for Vegetables, Beijing Vegetable Research Center, Beijing Academy of Agriculture and Forestry Science, Beijing 100097, China

Beijing Key Laboratory of Vegetable Germplasms Improvement, Key Laboratory of Biology and Genetics Improvement of Horticultural Crops (North China), Ministry of Agriculture and Rural Affairs, Beijing 100097, China

Department of Agriculture, Food, and Environment (Di3A), University of Catania, Via Valdisavoia 5, 95123 Catania, Italy

Key Laboratory of Urban Agriculture (North China), Ministry of Agriculture and Rural Affairs, Beijing 100097, China

Funding

Innovation and Development Program of Beijing Vegetable Research Center · the Invitation Program of Foreign Experts of Beijing Academy of Agriculture and Forestry Sciences · National Key Research and Development Program · Technology Innovation Capacity Building Project of Beijing Academy of Agriculture and Forestry Sciences · Youth Foundation of Beijing Academy of Agriculture and Forestry Sciences · Young Talent Supporting Program of Beijing Academy of Agriculture and Forestry Sciences

References (45)

Show source-provided references
1. The evolution of genetic diversity of broccoli cultivars in China since 198010.1016/j.scienta.2019.02.034 ↗
2. Comparison of nuclear ribosomal DNA sequences from Alternaria species pathogenic to crucifers10.1016/S0953-7562(09)80720-X ↗
3. Characteristics of cruciferous black spot pathogens, Alternaria brassicicola and A. brassicae
4. Identification of the Solanum nigrum extract component involved in controlling cabbage black leaf spot disease10.1021/jf103698b ↗
5. Identification and characterization of Alternaria species causing leaf spot on cabbage, cauliflower, wild and cultivated rocket by using molecular and morphological features and mycotoxin production10.1007/s10658-017-1190-0 ↗
6. Biological efficacy of marine-derived Trichoderma in controlling chili anthracnose and black spot disease in Chinese kale10.1007/s10658-023-02668-1 ↗
7. Meng, S., Torto-Alalibo, T., Chibucos, M.C., Tyler, B.M., and Dean, R.A. (2009). Common processes in pathogenesis by fungal and oomycete plant pathogens, described with Gene Ontology terms. BMC Microbiol., 9.10.1186/1471-2180-9-S1-S7 ↗
8. Dhayanithy, G., Subban, K., and Chelliah, J. (2019). Diversity and biological activities of endophytic fungi associated with Catharanthus roseus. BMC Microbiol., 19.10.1186/s12866-019-1386-x ↗
9. The HOG Pathway Plays Different Roles in Conidia and Hyphae During Virulence of Alternaria alternata10.1094/MPMI-06-20-0165-R ↗
10. Eseola, A.B., Ryder, L.S., Osés-Ruiz, M., Findlay, K., Yan, X., Cruz-Mireles, N., Molinari, C., Garduño-Rosales, M., and Talbot, N.J. (2021). Investigating the cell and developmental biology of plant infection by the rice blast fungus Magnaporthe oryzae. Fungal Genet. Biol., 154.10.1016/j.fgb.2021.103562 ↗
11. Identification of novel virulence factors associated with signal transduction pathways in Alternaria brassicicola10.1111/j.1365-2958.2009.06689.x ↗
12. Cho, Y., Srivastava, A., Ohm, R.A., Lawrence, C.B., Wang, K.H., Grigoriev, I.V., and Marahatta, S.P. (2012). Transcription factor Amr1 induces melanin biosynthesis and suppresses virulence in Alternaria brassicicola. PLoS Pathog., 8.10.1371/journal.ppat.1002974 ↗
13. Endopolygalacturonase Is Essential for Citrus Black Rot Caused by Alternaria citri but Not Brown Spot Caused by Alternaria alternata10.1094/MPMI.2001.14.6.749 ↗
14. Analysis of a nonribosomal peptide synthetase gene from Alternaria brassicae and flanking genomic sequences10.1007/s00294-003-0479-z ↗
15. The SLT2 mitogen-activated protein kinase-mediated signalling pathway governs conidiation, morphogenesis, fungal virulence and production of toxin and melanin in the tangerine pathotype of Alternaria alternata10.1111/j.1364-3703.2010.00701.x ↗
16. Functional analysis of the melanin biosynthesis genes ALM1 and BRM2-1 in the tomato pathotype of Alternaria alternata10.1007/s10327-011-0356-4 ↗
17. A putative transcription factor Gf.BMR1 in Grifola frondosa, the homolog of BMR1 in Bipolaris oryzae, was strongly induced by near-ultraviolet light and blue light10.1016/j.myc.2014.05.005 ↗
18. NPR1: The spider in the web of induced resistance signaling pathways10.1016/j.pbi.2004.05.006 ↗
19. A Method for Inoculation and Evaluation of Rice Sheath Blight Disease10.1094/PDIS-92-1-0025 ↗
20. N-hydroxypipecolic acid triggers systemic acquired resistance through extracellular NAD (P)10.1038/s41467-023-42629-0 ↗
21. MAPK cascades in plant disease resistance signaling10.1146/annurev-phyto-082712-102314 ↗
22. Isolation and molecular characterization of pathogenesis related PR2 gene and its promoter from Brassica juncea10.1007/s10535-017-0726-7 ↗
23. Arabidopsis MAP kinase 4 regulates salicylic acid- and jasmonic acid/ethylene-dependent responses via EDS1 and PAD410.1111/j.1365-313X.2006.02806.x ↗
24. Interplay between JA, SA and ABA signalling during basal and induced resistance against Pseudomonas syringae and Alternaria brassicicola10.1111/j.1365-313X.2007.03397.x ↗
25. Contribution of cell wall peroxidase- and NADPH oxidase-derived reactive oxygen species to Alternaria brassicicola-induced oxidative burst in Arabidopsis10.1111/mpp.12769 ↗
26. Natural variation in Tiller Number 1 affects its interaction with TIF1 to regulate tillering in rice10.1111/pbi.14017 ↗
27. Teosinte ligule allele narrows plant architecture and enhances high-density maize yields10.1126/science.aax5482 ↗
28. Creating novel Wx alleles with fine-tuned amylose levels and improved grain quality in rice by promoter editing using CRISPR/Cas9 system10.1111/pbi.13391 ↗
29. Xie, Q., Zhao, Y., Liu, Y., Han, F., Liu, W., and Li, Z. (2022). Genetic Diversity and DNA Fingerprinting in Broccoli Carrying Multiple Clubroot Resistance Genes Based on SSR Markers. Appl. Sci., 12.10.3390/app12094754 ↗
30. Separate jasmonate-dependent and salicylate-dependent defense-response pathways in Arabidopsis are essential for resistance to distinct microbial pathogens10.1073/pnas.95.25.15107 ↗
31. Genetic mapping and localization of a major QTL for seedling resistance to downy mildew in Chinese cabbage (Brassica rapa ssp. pekinensis)10.1007/s11032-009-9257-z ↗
32. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics
33. Alt a 1 allergen homologs from Alternaria and related taxa: Analysis of phylogenetic content and secondary structure10.1016/j.fgb.2004.10.009 ↗
34. Molecular characterization, comparison of screening methods, and evaluation of cross-pathogenicity of black rot (Xanthomonas campestris pv. campestris) strains from cabbage, choy sum, leafy mustard and pakchoi from Taiwan10.1111/ppa.12857 ↗
35. RAPD analysis of three Alternaria species pathogenic to crucifers10.1017/S0953756297005479 ↗
36. Analysis of intraspecific and interspecific variation in the genus Alternaria by the use of RAPD-PCR10.1111/j.1744-7348.1998.tb05197.x ↗
37. Isolation and characterization of polymorphic microsatellite markers for Alternaria alternata10.1111/j.1471-8286.2005.01250.x ↗
38. WRKY33-mediated indolic glucosinolate metabolic pathway confers resistance against Alternaria brassicicola in Arabidopsis and Brassica crops10.1111/jipb.13245 ↗
39. Production of a host-specific toxin by germinating spores of Alternaria brassicicola10.1006/pmpp.1998.0147 ↗
40. Host-specific AB-toxin production by germinating spores of Alternaria brassicicola is induced by a gost-derived oligosaccharide10.1016/j.pmpp.2005.03.005 ↗
41. Pochon, S., Simoneau, P., Pigne, S., Balidas, S., Bataille-Simoneau, N., Campion, C., Jaspard, E., Calmes, B., Hamon, B., and Berruyer, R. (2013). Dehydrin-like proteins in the necrotrophic fungus Alternaria brassicicola have a role in plant pathogenesis and stress response. PLoS ONE, 8.10.1371/journal.pone.0075143 ↗
42. Antifungal activity of venenatine. an indole alkaloid isolated from Alstonia venenata10.1007/BF02817419 ↗
43. Sinalexin, a phytoalexin from white mustard elicited by destruxin B and Alternaria brassicae10.1016/S0031-9422(97)00362-2 ↗
44. CmMLO17 and its partner CmKIC potentially support Alternaria alternata growth in Chrysanthemum morifolium10.1038/s41438-021-00534-x ↗
45. The integration of transcriptomic and transgenic analyses reveals the involvement of the SA response pathway in the defense of chrysanthemum against the necrotrophic fungus Alternaria sp.10.1038/s41438-020-0297-1 ↗