journal article·2020-12-15Open access

Automated Detection of Sleep Stages Using Deep Learning Techniques: A Systematic Review of the Last Decade (2010–2020)

Hui Wen Loh, Chui Ping Ooi, Jahmunah Vicnesh, Shu Lih Oh, Oliver Faust, Arkadiusz Gertych, U. Rajendra Acharya

Applied Sciences· Volume 10· Issue 24

Abstract

Sleep is vital for one’s general well-being, but it is often neglected, which has led to an increase in sleep disorders worldwide. Indicators of sleep disorders, such as sleep interruptions, extreme daytime drowsiness, or snoring, can be detected with sleep analysis. However, sleep analysis relies on visuals conducted by experts, and is susceptible to inter- and intra-observer variabilities. One way to overcome these limitations is to support experts with a programmed diagnostic tool (PDT) based on artificial intelligence for timely detection of sleep disturbances. Artificial intelligence technology, such as deep learning (DL), ensures that data are fully utilized with low to no information loss during training. This paper provides a comprehensive review of 36 studies, published between March 2013 and August 2020, which employed DL models to analyze overnight polysomnogram (PSG) recordings for the classification of sleep stages. Our analysis shows that more than half of the studies employed convolutional neural networks (CNNs) on electroencephalography (EEG) recordings for sleep stage classification and achieved high performance. Our study also underscores that CNN models, particularly one-dimensional CNN models, are advantageous in yielding higher accuracies for classification. More importantly, we noticed that EEG alone is not sufficient to achieve robust classification results. Future automated detection systems should consider other PSG recordings, such as electroencephalogram (EEG), electrooculogram (EOG), and electromyogram (EMG) signals, along with input from human experts, to achieve the required sleep stage classification robustness. Hence, for DL methods to be fully realized as a practical PDT for sleep stage scoring in clinical applications, inclusion of other PSG recordings, besides EEG recordings, is necessary. In this respect, our report includes methods published in the last decade, underscoring the use of DL models with other PSG recordings, for scoring of sleep stages.
Source: crossref · Quality: baseline

Research context

OpenAlex topics: EEG and Brain-Computer Interfaces · Sleep and Wakefulness Research · Obstructive Sleep Apnea Research

SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.

Affiliations

School of Science and Technology, Singapore University of Social Sciences, Singapore 599494, Singapore

School of Engineering, Ngee Ann Polytechnic, Singapore 599489, Singapore

Department of Engineering and Mathematics, Sheffield Hallam University, Sheffield S1 1WB, UK

Department of Surgery, Department of Pathology and Laboratory Medicine, Cedars-Sinai Medical Center, Los Angeles, CA 90040, USA

Faculty of Biomedical Engineering, Silesian University of Technology, Roosevelta 40, 41-800 Zabrze, Poland

Department of Bioinformatics and Medical Engineering, Asia University, Taichung 41354, Taiwan

International Research Organization for Advanced Science and Technology (IROAST), Kumamoto University, Kumamoto 860-8555, Japan

School of Management and Enterprise, University of Southern Queensland, Darling Heights, QLD 4350, Australia

References (100+)

Show source-provided references
1. Sleep and circadian rhythms: Key components in the regulation of energy metabolism10.1016/j.febslet.2007.06.079 ↗
2. Sleep, sleep disorders, and sexual dysfunction10.5534/wjmh.180045 ↗
3. Colten, H.R., and Altevogt, B.M. (2006). Sleep Disorders and Sleep Deprivation: An Unmet Public Health Problem, National Academies Press.
4. Sleep problems: An emerging global epidemic? Findings from the INDEPTH WHO-SAGE study among more than 40,000 older adults from 8 countries across Africa and Asia10.5665/sleep.2012 ↗
5. Rethinking sleep analysis10.5664/jcsm.27124 ↗
6. Spriggs, W.H. (2014). Essentials of Polysomnography, Jones & Bartlett Learning.
7. The visual scoring of sleep in adults10.5664/jcsm.26814 ↗
8. Ambulatory monitoring in the diagnosis and management of obstructive sleep apnoea syndrome10.1183/09059180.00004213 ↗
9. Neurophysiological studies of abnormal night sleep and the Pickwickian syndrome10.1016/S0079-6123(08)63590-6 ↗
10. Obstructive sleep apnea: From simple upper airway obstruction to systemic inflammation10.4103/0256-4947.75770 ↗
11. Sleep apnea as an independent risk factor for all-cause mortality: The Busselton health study
12. Interactions between sleep, stress, and metabolism: From physiological to pathological conditions10.1016/j.slsci.2015.09.002 ↗
13. Restless legs syndrome: Evidence for nocturnal hypothalamic-pituitary-adrenal system activation10.1002/mds.23026 ↗
14. Sleep disturbances and health problems: Sleep matters10.3399/bjgp10X484147 ↗
15. The role of upper airway anatomy and physiology in obstructive sleep10.1016/S0272-5231(21)00869-8 ↗
16. Sleep-disordered Breathing and Cardiovascular Disease10.1164/ajrccm.163.1.2001008 ↗
17. Obstructive sleep apnea and hypertension: A critical review10.1007/s11906-014-0482-4 ↗
18. Balachandran, J.S., and Patel, S.R. (2014). Obstructive sleep apnea. Ann. Intern. Med., 161.10.7326/0003-4819-161-9-201411040-01005 ↗
19. The link between fatigue and safety10.1016/j.aap.2009.11.011 ↗
20. Medical and socio-professional impact of insomnia
21. Iber, C., Ancoli-Israel, S., Chesson, A.L., and Quan, S.F. (2007). The AASM Manual for the Scoring of Sleep and Associated Events: Rules, Terminology and Technical Specification, American Academy of Sleep Medicine.
22. Evaluation of automated and semi-automated scoring of polysomnographic recordings from a clinical trial using zolpidem in the treatment of insomnia10.1093/sleep/30.11.1562 ↗
23. Assessment of automated scoring of polysomnographic recordings in a population with suspected sleep-disordered breathing10.1093/sleep/27.7.1394 ↗
24. An E-health solution for automatic sleep classification according to Rechtschaffen and Kales: Validation study of the Somnolyzer 24 × 7 utilizing the siesta database10.1159/000085205 ↗
25. Nonlinear dynamics measures for automated EEG-based sleep stage detection10.1159/000441975 ↗
26. Mirza, B., Wang, W., Wang, J., Choi, H., Chung, N.C., and Ping, P. (2019). Machine learning and integrative analysis of biomedical big data. Genes, 10.10.3390/genes10020087 ↗
27. A review of automated sleep stage scoring based on physiological signals for the new millennia10.1016/j.cmpb.2019.04.032 ↗
28. Shoeibi, A., Ghassemi, N., Khodatars, M., Jafari, M., Hussain, S., Alizadehsani, R., Moridian, P., Khosravi, A., Hosseini-Nejad, H., and Rouhani, M. (2020). Epileptic Seizure Detection Using Deep Learning Techniques: A Review. arXiv.10.3390/ijerph18115780 ↗
29. Deep learning for healthcare applications based on physiological signals: A review10.1016/j.cmpb.2018.04.005 ↗
30. Are the long–short term memory and convolution neural networks really based on biological systems?10.1016/j.icte.2018.04.001 ↗
31. Receptive fields, binocular interaction and functional architecture in the cat’s visual cortex10.1113/jphysiol.1962.sp006837 ↗
32. Convolutional neural networks: An overview and application in radiology10.1007/s13244-018-0639-9 ↗
33. Tabian, I., Fu, H., and Khodaei, Z.S. (2019). A convolutional neural network for impact detection and characterization of complex composite structures. Sensors, 19.10.3390/s19224933 ↗
34. Imagenet classification with deep convolutional neural networks10.1145/3065386 ↗
35. Using recurrent neural networks to improve the perception of speech in non-stationary noise by people with cochlear implants10.1121/1.5119226 ↗
36. Coto-Jiménez, M. (2019). Improving post-filtering of artificial speech using pre-trained LSTM neural networks. Biomimetics, 4.10.20944/preprints201905.0228.v1 ↗
37. Lyu, C., Chen, B., Ren, Y., and Ji, D. (2017). Long short-term memory RNN for biomedical named entity recognition. BMC Bioinform., 18.10.1186/s12859-017-1868-5 ↗
38. A Novel connectionist system for unconstrained handwriting recognition10.1109/TPAMI.2008.137 ↗
39. Brain wave classification using long short-term memory network based OPTICAL predictor
40. Kim, B.-H., and Pyun, J.-Y. (2020). ECG identification for personal authentication using LSTM-based deep recurrent neural networks. Sensors, 20.10.3390/s20113069 ↗
41. A Review of recurrent neural networks: LSTM cells and network architectures10.1162/neco_a_01199 ↗
42. Long short-term memory10.1162/neco.1997.9.8.1735 ↗
43. Gers, F.A., Schmidhuber, J., and Cummins, F. (1999, January 7–10). Learning to forget: Continual prediction with LSTM. Proceedings of the 9th International Conference on Artificial Neural Networks—ICANN’99, Edinburgh, UK.10.1049/cp:19991218 ↗
44. Masuko, T. (2017, January 16–20). Computational cost reduction of long short-term memory based on simultaneous compression of input and hidden state. Proceedings of the 2017 IEEE Automatic Speech Recognition and Understanding Workshop, Okinawa, Japan.10.1109/ASRU.2017.8268926 ↗
45. Dash, S., Acharya, B.R., Mittal, M., Abraham, A., and Kelemen, A. (2020). Deep Learning Techniques for Biomedical and Health Informatics, Springer International Publishing.10.1007/978-3-030-33966-1 ↗
46. Rumelhart, D.E., and McClelland, J.L. (1987). Learning internal representations by error propagation. Parallel Distributed Processing: Explorations in the Microstructure of Cognition: Foundations, MIT Press.10.7551/mitpress/5236.001.0001 ↗
47. Deep learning for computer vision: A brief review
48. Testolin, A., and Diamant, R. (2020). Combining denoising autoencoders and dynamic programming for acoustic detection and tracking of underwater moving targets. Sensors, 20.10.3390/s20102945 ↗
49. Comprehensive evaluation of deep learning architectures for prediction of DNA/RNA sequence binding specificities10.1093/bioinformatics/btz339 ↗
50. Long, H., Liao, B., Xu, X., and Yang, J. (2018). A hybrid deep learning model for predicting protein hydroxylation sites. Int. J. Mol. Sci., 19.10.3390/ijms19092817 ↗
51. Proposed sments and amendments to ‘A Manual of Standardized Terminology, Techniques and Scoring System for Sleep Stages of Human Subjects’, the Rechtschaffen & Kales (1968) standard10.1046/j.1440-1819.2001.00810.x ↗
52. Physiology of sleep10.2337/diaspect.29.1.5 ↗
53. PhysioBank, PhysioToolkit, and PhysioNet10.1161/01.CIR.101.23.e215 ↗
54. Analysis of a sleep-dependent neuronal feedback loop: The slow-wave microcontinuity of the EEG10.1109/10.867928 ↗
55. The national sleep research resource: Towards a sleep data commons10.1093/jamia/ocy064 ↗
56. The sleep heart health study: Design, rationale, and methods
57. Development of the polysomnographic database on CD-ROM10.1046/j.1440-1819.1999.00527.x ↗
58. ISRUC-Sleep: A comprehensive public dataset for sleep researchers10.1016/j.cmpb.2015.10.013 ↗
59. Montreal archive of sleep studies: An open-access resource for instrument benchmarking and exploratory research10.1111/jsr.12169 ↗
60. Deep learning in the cross-time frequency domain for sleep staging from a single-lead electrocardiogram10.1088/1361-6579/aaf339 ↗
61. Use of features from RR-time series and EEG signals for automated classification of sleep stages in deep neural network framework10.1016/j.bbe.2018.05.005 ↗
62. Sleep stage classification from heart-rate variability using long short-term memory neural networks10.1038/s41598-019-49703-y ↗
63. Zhu, T., Luo, W., and Yu, F. (2020). Convolution-and attention-based neural network for automated sleep stage classification. Int. J. Environ. Res. Public Health, 17.10.3390/ijerph17114152 ↗
64. GACNN SleepTuneNet: A genetic algorithm designing the convolutional neuralnetwork architecture for optimal classification of sleep stages from a single EEG channel10.3906/elk-1903-186 ↗
65. Yıldırım, Ö., Baloglu, U.B., and Acharya, U.R. (2019). A deep learning model for automated sleep stages classification using PSG signals. Int. J. Environ. Res. Public Health, 16.10.3390/ijerph16040599 ↗
66. Automatic sleep stage recurrent neural classifier using energy features of EEG signals10.1016/j.neucom.2012.11.003 ↗
67. Cascaded LSTM recurrent neural network for automated sleep stage classification using single-channel EEG signals10.1016/j.compbiomed.2019.01.013 ↗
68. Wei, L., Lin, Y., Wang, J., and Ma, Y. (2017, January 6–8). Time-Frequency Convolutional Neural Network for Automatic Sleep Stage Classification Based on Single-Channel EEG. Proceedings of the 2017 IEEE 29th International Conference on Tools with Artificial Intelligence, Boston, MA, USA.10.1109/ICTAI.2017.00025 ↗
69. Mousavi, S., Afghah, F., and Acharya, U.R. (2019). SleepEEGNet: Automated sleep stage scoring with sequence to sequence deep learning approach. PLoS ONE, 14.10.1371/journal.pone.0216456 ↗
70. Intra- and inter-epoch temporal context network (IITNet) using sub-epoch features for automatic sleep scoring on raw single-channel EEG10.1016/j.bspc.2020.102037 ↗
71. Automated multi-model deep neural network for sleep stage scoring with unfiltered clinical data10.1007/s11325-019-02008-w ↗
72. DeepSleepNet: A model for automatic sleep stage scoring based on raw single-channel EEG10.1109/TNSRE.2017.2721116 ↗
73. Joint classification and prediction CNN framework for automatic sleep stage classification10.1109/TBME.2018.2872652 ↗
74. Vilamala, A., Madsen, K.H., and Hansen, L.K. (2017, January 25–28). Deep convolutional neural networks for interpretable analysis of EEG sleep stage scoring. Proceedings of the 2017 IEEE 27th International Workshop on Machine Learning for Signal Processing (MLSP), Tokyo, Japan.10.1109/MLSP.2017.8168133 ↗
75. Phan, H., Andreotti, F., Cooray, N., Chen, O.Y., and de Vos, M. (2018, January 18–21). DNN filter bank improves 1-max pooling CNN for single-channel EEG automatic sleep stage classification. Proceedings of the 2018 40th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), Honolulu, HI, USA.10.1109/EMBC.2018.8512286 ↗
76. Phan, H., Andreotti, F., Cooray, N., Chen, O.Y., and De Vos, M. (2018, January 18–21). Automatic Sleep Stage Classification Using Single-Channel EEG: Learning Sequential Features with Attention-Based Recurrent Neural Networks. Proceedings of the 2018 40th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), Honolulu, HI, USA.10.1109/EMBC.2018.8512480 ↗
77. Xu, M., Wang, X., Zhangt, X., Bin, G., Jia, Z., and Chen, K. (2020, January 13–15). Computation-Efficient Multi-Model Deep Neural Network for Sleep Stage Classification. Proceedings of the ASSE ’20: 2020 Asia Service Sciences and Software Engineering Conference, Nagoya, Japan.10.1145/3399871.3399887 ↗
78. Wang, Y., and Wu, D. (December, January 30). Deep Learning for Sleep Stage Classification. Proceedings of the 2018 Chinese Automation Congress (CAC), Xi’an, China.10.1109/CAC.2018.8623637 ↗
79. Convolutional neural networks for sleep stage scoring on a two-channel EEG signal
80. Automatic sleep stage classification using time-frequency images of CWT and transfer learning using convolution neural network10.1016/j.bbe.2020.01.010 ↗
81. Tsinalis, O., Matthews, P.M., Guo, Y., and Zafeiriou, S. (2016). Automatic Sleep Stage Scoring with Single-Channel EEG Using Convolutional Neural Networks, Imperial College London.
82. Sokolovsky, M., Guerrero, F., Paisarnsrisomsuk, S., Ruiz, C., and Alvarez, S.A. (2019). Deep learning for automated feature discovery and classification of sleep stages. IEEE/ACM Trans. Comput. Biol. Bioinform., 17.10.1109/TCBB.2019.2912955 ↗
83. Mixed neural network approach for temporal sleep stage classification10.1109/TNSRE.2017.2733220 ↗
84. A deep learning architecture for temporal sleep stage classification using multivariate and multimodal time series10.1109/TNSRE.2018.2813138 ↗
85. SeqSleepNet: End-to-end hierarchical recurrent neural network for sequence-to-sequence automatic sleep staging10.1109/TNSRE.2019.2896659 ↗
86. Orthogonal convolutional neural networks for automatic sleep stage classification based on single-channel EEG10.1016/j.cmpb.2019.105089 ↗
87. Complex-valued unsupervised convolutional neural networks for sleep stage classification10.1016/j.cmpb.2018.07.015 ↗
88. A convolutional neural network for sleep stage scoring from raw single-channel EEG10.1016/j.bspc.2017.12.001 ↗
89. Fernández-Varela, I., Hernández-Pereira, E., Alvarez-Estevez, D., and Moret-Bonillo, V. (2019). A Convolutional Network for Sleep Stages Classification. arXiv.10.3390/proceedings2181174 ↗
90. Zhang, L., Fabbri, D., Upender, R., and Kent, D.T. (2019). Automated sleep stage scoring of the Sleep Heart Health Study using deep neural networks. Sleep, 42.10.1093/sleep/zsz159 ↗
91. Automatic sleep stage classification based on convolutional neural network and fine-grained segments10.1155/2018/7143586 ↗
92. Yang, Y., Zheng, X., and Yuan, F. (2018, January 28–31). A Study on Automatic Sleep Stage Classification Based on CNN-LSTM. Proceedings of the ICCSE’18: The 3rd International Conference on Crowd Science and Engineering, Singapore.10.1145/3265689.3265693 ↗
93. A hybrid self-attention deep learning framework for multivariate sleep stage classification10.1186/s12859-019-3075-z ↗
94. Expert-level sleep scoring with deep neural networks10.1093/jamia/ocy131 ↗
95. Biswal, S., Kulas, J., Sun, H., Goparaju, B., Westover, M.B., Bianchi, M.T., and Sun, J. (2017). SLEEPNET: Automated Sleep Staging System via Deep Learning. arXiv.
96. Sleep Duration as a risk factor for cardiovascular disease—A review of the recent literature10.2174/157340310790231635 ↗
97. Woods, S.L., Froelicher, E.S.S., Motzer, S.U., and Bridges, S.J. (2005). Cardiac Nursing, Lippincott Williams and Wilkins. [5th ed.].
98. Breathing during sleep in normal subjects10.1016/S0272-5231(21)00396-8 ↗
99. Cerebral O2 metabolism and cerebral blood flow in humans during deep and rapid-eye-movement sleep10.1152/jappl.1991.70.6.2597 ↗
100. The SIESTA project polygraphic and clinical database10.1109/51.932725 ↗