Detection of DNA hybridization using graphene-coated black phosphorus surface plasmon resonance sensor
Source abstract
Abstract
In this paper, graphene-coated black phosphorus at the metal surface for the detection of DNA hybridization event is numerically demonstrated. The strategy consists of placing the sensing medium on top of black phosphorus–graphene-coated SPR which interfaces with phosphate-buffered saline solution carrying single-stranded DNA. Upon hybridization with its complementary DNA, desorption of the nanostructures takes place and thus enables the sensitive detection of the DNA hybridization event. The proposed sensor exhibits a sensitivity (125 ο/RIU), detection accuracy (0.95) and quality factor (13.62 RIU−1) for complementary DNA. In comparison with other reported papers, our suggested sensor provides much better performance. Thus, this label-free DNA detection platform should spur off new interest towards the use of black phosphorus–graphene-coated SPR interfaces.
Source: openaire · Quality: candidate unverified · Source record ↗
Research context
OpenAlex topics: Advanced biosensing and bioanalysis techniques · 2D Materials and Applications · Plasmonic and Surface Plasmon Research
SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.
References (27)
Show source-provided references
1. K. Tamersit, F. Djeffal, Double-gate graphene nanoribbon field-effect transistor for DNA and gas sensing applications: simulation study and sensitivity analysis. IEEE Sens. J. 16(11), 4180–4191 (2016)10.1109/JSEN.2016.2550492 ↗
2. T.-J. Wang, C.-W. Tu, F.-K. Liu, Integrated-optic surface-plasmon-resonance biosensor using gold nanoparticles by bipolarization detection. IEEE J. Sel. Top. Quantum Electron. 11(2), 493–499 (2005)10.1109/JSTQE.2005.846539 ↗
3. N.-F. Chiu, W.-C. Lee, T.-S. Jiang, Constructing a novel asymmetric dielectric structure toward the realization of high performance surface plasmon resonance biosensors. IEEE Sens. J. 13(9), 3483–3489 (2013)10.1109/JSEN.2013.2263635 ↗
4. A. Madeira, E. Vikeved, A. Nilsson, B. Sjogren, P.E. Andrén, P. Svenningsson, Identification of protein-protein interactions by surface plasmon resonance followed by mass spectrometry. Curr. Protoc. Protein Sci. 65, 19.21.1–19.21.9 (2011)10.1002/0471140864.ps1921s65 ↗
5. J. Majka, C. Speck, Analysis of protein-DNA interactions using surface plasmon resonance. Adv. Biochem. Eng. Biotechnol. 104, 13–36 (2007)
6. H.F. Teh, W.Y.X. Peh, X. Su, J.S. Thomsen, Characterization of protein-DNA interactions using surface plasmon resonance spectroscopy with various assay schemes. Biochemistry 46(8), 2127–2135 (2007)10.1021/bi061903t ↗
7. J.B. Maurya, Y.K. Prajapati, V. Singh, J.P. Saini, R. Tripathi, Improved performance of the surface plasmon resonance biosensor based on graphene or MoS2 using silicon. Opt. Commun. 359, 426–434 (2016)10.1016/j.optcom.2015.10.010 ↗
8. J. Homola, Present and future of surface plasmon resonance biosensors. Anal. Bioanal. Chem. 377(3), 528–539 (2003)10.1007/s00216-003-2101-0 ↗
9. Q. Ouyang, S. Zeng, L. Jiang, J. Qu, X.-Q. Dinh, J. Qian, S. He, P. Coquet, K.-T. Yong, Two-dimensional transition metal dichalcogenide enhanced phase-sensitive plasmonic biosensors: theoretical insight. J. Phys. Chem. C 121(11), 6282–6289 (2017)10.1021/acs.jpcc.6b12858 ↗
10. L. Wu, Y. Jia, L. Jiang, J. Guo, X. Dai, Y. Xiang, D. Fan, Sensitivity improved spr biosensor based on the MoS2/graphene-aluminum hybrid structure. J. Lightwave Technol. 35(1), 82–87 (2017)10.1109/JLT.2016.2624982 ↗
11. J.B. Maurya, Y.K. Prajapati, A comparative study of different metal and prism in the surface plasmon resonance biosensor having MoS2-graphene. Opt. Quantum Electron. 48(5), 1–12 (2016)10.1007/s11082-016-0562-6 ↗
12. Q.H. Wang, K. Kalantar-Zadeh, A. Kis, J.N. Coleman, M.S. Strano, Electronics and optoelectronics of two-dimensional transition metal dichalcogenides. Nat. Nanotechnol. 7, 699–712 (2012)10.1038/nnano.2012.193 ↗
13. L. Wu, H.S. Chu, W.S. Koh, E.P. Li, Highly sensitive graphene biosensors based on surface plasmon resonance. Opt. Express 18, 14395–14400 (2010)10.1364/OE.18.014395 ↗
14. J. Qiao, X. Kong, Z.X. Hu, F. Yang, W. Ji, High-mobility transport anisotropy and linear dichroism in few-layer black phosphorus. Nat. Commun. 5, 4475–4475 (2014)10.1038/ncomms5475 ↗
15. S.D. Sarma, S. Adam, E.H. Hwang, E. Rossi, Electronic transport in two-dimensional graphene. Rev. Mod. Phys. 83(2), 407–470 (2011)10.1103/RevModPhys.83.407 ↗
16. M. Rahman, M. Anower, M. Hasan, M. Hossain, M. Haque, Design and numerical analysis of highly sensitive Au-MoS2-graphene based hybrid surface plasmon resonance biosensor. Opt. Commun. 396, 36–43 (2017)10.1016/j.optcom.2017.03.035 ↗
17. S.Y. Cho, Y. Lee, H.J. Koh, H. Jung, J.S. Kim, H.W. Yoo, J. Kim, H.T. Jung, Superior chemical sensing performance of black phosphorus: comparison with MoS2 and graphene. Adv. Mater. 28(32), 7020–7028 (2016)10.1002/adma.201601167 ↗
18. N. Mao, J. Tang, L. Xie, J. Wu, B. Han, J. Lin, S. Deng, W. Ji, H. Xu, K. Liu, L. Tong, J. Zhang, Optical anisotropy of black phosphorus in the visible regime. J. Am. Chem. Soc. 138(1), 300–305 (2016)10.1021/jacs.5b10685 ↗
19. Y. Cai, G. Zhang, Y.W. Zhang, Layer-dependent band alignment and work function of few-layer phosphorene. Sci. Rep. 4, 6677–6682 (2016)10.1038/srep06677 ↗
20. L. Wu, J. Guo, Q. Wang, S. Lu, X. Dai, Y. Xiang, D. Fan, Sensitivity enhancement by using few-layer black phosphorus-graphene/TMDCs heterostructure in surface plasmon resonance biochemical sensor. Sens. Actuators B 249, 542–548 (2017)10.1016/j.snb.2017.04.110 ↗
21. J.B. Maurya, Y.K. Prajapati, V. Singh, J.P. Saini, R. Tripathi, Performance of graphene–MoS2 based surface plasmon resonance sensor using silicon layer. Opt. Quantum Electron. 47, 3599–3611 (2015)10.1007/s11082-015-0233-z ↗
22. Y. Cai, G. Zhang, Y.-W. Zhang, Electronic properties of phosphorene/graphene and phosphorene/hexagonal boron nitride heterostructures. J. Phys. Chem. C 119(24), 13929–13936 (2015)10.1021/acs.jpcc.5b02634 ↗
23. H. Karimi, R. Yusof, R. Rahmani, H. Hosseinpour, M.T. Ahmadi, Development of solution-gated graphene transistor model for biosensors. Nanoscale Res. Lett. 9, 1–11 (2014)10.1186/1556-276X-9-71 ↗
24. L. Diéguez, N. Darwish, M. Mir, E. Martinez, M. Moreno, J. Samitier, Effect of the refractive index of buffer solutions in evanescent optical biosensors. Sens. Lett. 7(5), 851–855 (2009)10.1166/sl.2009.1161 ↗
25. V. Ball, J.J. Ramsden, Buffer dependence of refractive index increments of protein solutions. Biopolymers 46, 489–492 (1998)10.1002/(SICI)1097-0282(199812)46:7<489::AID-BIP6>3.0.CO;2-E ↗
26. L.J. Wang, G. Cao, T. Tu, H.O. Li, C. Zhou, X.J. Hao, Z. Su, G.C. Guo, H.W. Jiang, G.P. Guo, A graphene quantum dot with a single electron transistor as an integrated charge sensor. Appl. Phys. Lett. 97(26), 262113 (2010)10.1063/1.3533021 ↗
27. A. Verma, A. Prakash, R. Tripathi, Performance analysis of graphene based surface plasmon resonance biosensors for detection of Pseudomonas-like bacteria. J. Opt. Quantum Electron. 47, 1197–1205 (2015)10.1007/s11082-014-9976-1 ↗