journal article·2021-12Open access

Membrane‐Mediated Self‐Organization of Rod‐Like DNA Origami on Supported Lipid Bilayers

Alena Khmelinskaia, Henri G. Franquelim, Renukka Yaadav, Eugene P. Petrov, Petra Schwille

Advanced Materials Interfaces· Volume 8· Issue 24

Abstract

Abstract Organization of elongated particles into ordered phases on 2D surfaces and interfaces has been extensively studied during the last decades both theoretically and experimentally. For mutually repulsive particles on solid nondeformable substrates, the process is controlled only by the aspect ratio and the surface density of the adsorbed particles. The local elastic response of soft substrates to particle adhesion can drastically change the collective behavior of adsorbed rod‐like particles resulting in their self‐organization via substrate‐mediated interparticle attraction. Here, high‐speed atomic force microscopy is used to study the organization of DNA origami particles on locally responsive supported lipid bilayers (SLBs) in comparison with that on nondeformable solid mica surfaces. At high surface coverage, the aspect ratio‐dependent anisotropic phases expected for densely packed particles are observed. At intermediate and low surface densities, however, a drastically different phenomenology is observed: surprisingly strong surface‐mediated interparticle attraction of DNA origami particles is found on SLBs resulting in their self‐organization compared to their purely repulsive interaction on a mica surface. The formation of organized aggregates of elongated DNA origami particles on SLBs is explained by exceptionally strong nanoparticle adhesion to the membrane that responds with a local deformation in spite of the presence of the solid support.
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Research context

OpenAlex topics: Lipid Membrane Structure and Behavior · Advanced biosensing and bioanalysis techniques · Nanopore and Nanochannel Transport Studies

SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.

Affiliations

Max Planck Institute of Biochemistry Am Klopferspitz 18 82152 Martinsried Germany

Physikalisch‐Technische Bundesanstalt Abbestraße 2‐12 10587 Berlin Germany

Funding

Deutsche Forschungsgemeinschaft · Max-Planck-Gesellschaft

References (86)

Show source-provided references
1. 10.1021/mp900066210.1021/mp9000662 ↗
2. 10.1039/b813853m10.1039/b813853m ↗
3. 10.1146/annurev-physchem-040215-11263410.1146/annurev-physchem-040215-112634 ↗
4. 10.1038/s41598-017-06668-010.1038/s41598-017-06668-0 ↗
5. 10.1080/17458080.2017.141325310.1080/17458080.2017.1413253 ↗
6. 10.1021/nl070363y10.1021/nl070363y ↗
7. 10.1021/ar600012y10.1021/ar600012y ↗
8. 10.1116/1.502214510.1116/1.5022145 ↗
9. 10.1038/s42004-020-00377-y10.1038/s42004-020-00377-y ↗
10. 10.1038/ncomms697410.1038/ncomms6974 ↗
11. 10.7554/eLife.6334910.7554/eLife.63349 ↗
12. 10.1016/j.pbiomolbio.2014.02.00310.1016/j.pbiomolbio.2014.02.003 ↗
13. 10.1021/acsnano.0c0173910.1021/acsnano.0c01739 ↗
14. 10.1007/s10051005096810.1007/s100510050968 ↗
15. 10.1039/c2sm25477h10.1039/c2sm25477h ↗
16. 10.1016/j.bpj.2012.12.04510.1016/j.bpj.2012.12.045 ↗
17. 10.1039/c3nr02683c10.1039/c3nr02683c ↗
18. 10.1073/pnas.130981911010.1073/pnas.1309819110 ↗
19. 10.1038/ncomms821910.1038/ncomms8219 ↗
20. 10.1088/1674-1056/24/11/11820210.1088/1674-1056/24/11/118202 ↗
21. 10.1039/C5FD00144G10.1039/C5FD00144G ↗
22. 10.1039/C6SM01522K10.1039/C6SM01522K ↗
23. 10.1039/C7SM00829E10.1039/C7SM00829E ↗
24. 10.1021/acs.langmuir.1c0041610.1021/acs.langmuir.1c00416 ↗
25. 10.1088/0022-3727/49/19/19400110.1088/0022-3727/49/19/194001 ↗
26. 10.1038/s43586-020-00009-810.1038/s43586-020-00009-8 ↗
27. Cai W. · Sci. Technol. Adv. Mater. · 2017 · 9 · 77
28. 10.1103/PhysRevA.31.177610.1103/PhysRevA.31.1776 ↗
29. 10.1063/1.48163710.1063/1.481637 ↗
30. 10.1103/PhysRevE.72.05171710.1103/PhysRevE.72.051717 ↗
31. 10.1140/epjb/e2009-00333-x10.1140/epjb/e2009-00333-x ↗
32. 10.1021/nl504158h10.1021/nl504158h ↗
33. 10.1002/anie.20140396510.1002/anie.201403965 ↗
34. 10.1063/1.184915910.1063/1.1849159 ↗
35. 10.1039/C7CP07026H10.1039/C7CP07026H ↗
36. 10.1073/pnas.101494210810.1073/pnas.1014942108 ↗
37. 10.1039/c2sm07428a10.1039/c2sm07428a ↗
38. 10.1088/1742-5468/2016/08/08330210.1088/1742-5468/2016/08/083302 ↗
39. 10.1063/1.481236110.1063/1.4812361 ↗
40. 10.1039/b100005p10.1039/b100005p ↗
41. 10.1021/ja005913810.1021/ja0059138 ↗
42. 10.1021/nn101725j10.1021/nn101725j ↗
43. 10.1063/1.349066910.1063/1.3490669 ↗
44. 10.1103/PhysRevLett.107.06570210.1103/PhysRevLett.107.065702 ↗
45. 10.1126/science.126090110.1126/science.1260901 ↗
46. 10.1039/C3CP53433B10.1039/C3CP53433B ↗
47. 10.1016/j.cis.2014.03.00310.1016/j.cis.2014.03.003 ↗
48. 10.1016/S0006-3495(03)74658-X10.1016/S0006-3495(03)74658-X ↗
49. 10.1016/S0006-3495(91)82222-610.1016/S0006-3495(91)82222-6 ↗
50. 10.1021/la950580r10.1021/la950580r ↗
51. 10.1016/S0006-3495(02)75338-110.1016/S0006-3495(02)75338-1 ↗
52. 10.1103/PhysRevLett.82.191110.1103/PhysRevLett.82.1911 ↗
53. 10.1021/ma000075n10.1021/ma000075n ↗
54. 10.1103/PhysRevLett.104.14810210.1103/PhysRevLett.104.148102 ↗
55. 10.1088/0022-3727/49/7/07400110.1088/0022-3727/49/7/074001 ↗
56. 10.1021/bi00510a01010.1021/bi00510a010 ↗
57. 10.1038/nprot.2013.03710.1038/nprot.2013.037 ↗
58. 10.1142/9789812811301_001910.1142/9789812811301_0019 ↗
59. 10.1016/S0021-9258(17)35990-210.1016/S0021-9258(17)35990-2 ↗
60. 10.1038/nrm233010.1038/nrm2330 ↗
61. 10.1016/S0006-3495(03)74594-910.1016/S0006-3495(03)74594-9 ↗
62. 10.1021/jp809974e10.1021/jp809974e ↗
63. 10.1039/C7CC02208E10.1039/C7CC02208E ↗
64. 10.1021/acs.langmuir.7b0004210.1021/acs.langmuir.7b00042 ↗
65. 10.1038/ncomms588910.1038/ncomms5889 ↗
66. 10.1038/nature0439610.1038/nature04396 ↗
67. 10.1146/annurev.physchem.012809.10345010.1146/annurev.physchem.012809.103450 ↗
68. 10.1016/j.cell.2009.04.01010.1016/j.cell.2009.04.010 ↗
69. 10.1016/j.bpj.2013.06.03910.1016/j.bpj.2013.06.039 ↗
70. 10.1016/j.bpj.2012.12.00610.1016/j.bpj.2012.12.006 ↗
71. 10.1039/C2FD20105D10.1039/C2FD20105D ↗
72. 10.1126/science.121170110.1126/science.1211701 ↗
73. 10.1093/nar/gkp43610.1093/nar/gkp436 ↗
74. 10.1038/nchem.107010.1038/nchem.1070 ↗
75. 10.1126/science.aaa537210.1126/science.aaa5372 ↗
76. 10.1038/nmeth.157010.1038/nmeth.1570 ↗
77. 10.1002/mrd.2248910.1002/mrd.22489 ↗
78. 10.1038/nchembio1106-56010.1038/nchembio1106-560 ↗
79. 10.1021/la050115m10.1021/la050115m ↗
80. 10.1021/jp062713v10.1021/jp062713v ↗
81. 10.1021/jz101376m10.1021/jz101376m ↗
82. 10.1039/C6NR07084A10.1039/C6NR07084A ↗
83. 10.1021/jacs.7b0657210.1021/jacs.7b06572 ↗
84. 10.1002/admi.20180043710.1002/admi.201800437 ↗
85. 10.1038/ncomms905210.1038/ncomms9052 ↗
86. 10.1016/S0006-3495(03)74673-610.1016/S0006-3495(03)74673-6 ↗