journal article·2021-02

Formation of Novel Octuplex DNA Molecules from Guanine Quadruplexes

Liat Katrivas, Natalie Fardian‐Melamed, Dvir Rotem, Danny Porath, Alexander Kotlyar

Advanced Materials· Volume 33· Issue 8
Publisher page

Abstract

Abstract Guanine quadruplex (G4)‐DNA structures have sparked the interest of many scientists due to their important biological roles and their potential use in molecular nanoelectronics and nanotechnology. The high guanine content in G4‐DNA endows it with mechanical stability, robustness, and improved charge transport properties—attractive attributes for a molecular nanowire. The self‐driven formation of a novel G4‐DNA‐based nanostructure, coined guanine octuplex (G8)‐DNA, is reported herein. Atomic force microscopy and scanning tunneling microscopy characterization of this molecule reveal its organized coiled‐coil structure, which is found to be stable under different temperatures and surrounding conditions. G8‐DNA exhibits enhanced stiffness, mechanical and thermodynamic stability when compared to its parent G4‐DNA. These, along with its high guanine content, make G8‐DNA a compelling new molecule, and a highly prospective candidate for molecular nanoelectronics.
Source: crossref · Quality: baseline

Research context

OpenAlex topics: Advanced biosensing and bioanalysis techniques · DNA and Nucleic Acid Chemistry · Molecular Junctions and Nanostructures

SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.

Affiliations

Department of Biochemistry and Molecular Biology George S. Wise Faculty of Life Sciences, and The Center of Nanoscience and Nanotechnology Tel Aviv University Ramat Aviv Tel Aviv 69978 Israel

Institute of Chemistry and The Center for Nanoscience and Nanotechnology The Hebrew University of Jerusalem Jerusalem 91904 Israel

Funding

Israel Science Foundation

References (45)

Show source-provided references
1. 10.1038/s41580-020-0236-x10.1038/s41580-020-0236-x ↗
2. 10.1038/nrm.2017.310.1038/nrm.2017.3 ↗
3. 10.1038/s41570-017-004110.1038/s41570-017-0041 ↗
4. 10.1038/ng.366210.1038/ng.3662 ↗
5. 10.1021/nl070013b10.1021/nl070013b ↗
6. 10.1002/anie.20100002210.1002/anie.201000022 ↗
7. 10.1038/nnano.2014.24610.1038/nnano.2014.246 ↗
8. 10.1002/anie.20030058910.1002/anie.200300589 ↗
9. 10.1016/j.bios.2016.10.06110.1016/j.bios.2016.10.061 ↗
10. 10.1002/ange.20140772910.1002/ange.201407729 ↗
11. 10.1016/j.bios.2015.11.07010.1016/j.bios.2015.11.070 ↗
12. 10.1073/pnas.14122949810.1073/pnas.141229498 ↗
13. 10.1038/nsmb98210.1038/nsmb982 ↗
14. 10.1093/nar/gkn45910.1093/nar/gkn459 ↗
15. 10.1016/j.ab.2007.10.01710.1016/j.ab.2007.10.017 ↗
16. 10.1002/adma.20040199710.1002/adma.200401997 ↗
17. 10.1038/nrg329610.1038/nrg3296 ↗
18. 10.1016/0092-8674(89)90610-710.1016/0092-8674(89)90610-7 ↗
19. 10.1021/cb700168610.1021/cb7001686 ↗
20. Wong H. M. · Curr. Opin. Mol. Ther · 2009 · 11 · 146
21. 10.1021/bi960412d10.1021/bi960412d ↗
22. 10.1021/nn402321g10.1021/nn402321g ↗
23. 10.1016/S0014-5793(98)01043-610.1016/S0014-5793(98)01043-6 ↗
24. 10.1093/nar/gkn51710.1093/nar/gkn517 ↗
25. 10.1016/j.febslet.2007.03.04010.1016/j.febslet.2007.03.040 ↗
26. 10.1021/bi701873c10.1021/bi701873c ↗
27. 10.1016/0009-2614(75)80190-410.1016/0009-2614(75)80190-4 ↗
28. 10.1016/S0009-2614(00)00638-210.1016/S0009-2614(00)00638-2 ↗
29. 10.1021/jp001109w10.1021/jp001109w ↗
30. 10.1073/pnas.96.21.1171310.1073/pnas.96.21.11713 ↗
31. 10.1063/1.346013210.1063/1.3460132 ↗
32. 10.1002/adma.20170698410.1002/adma.201706984 ↗
33. 10.1093/nar/gki96310.1093/nar/gki963 ↗
34. 10.1002/adma.20190281610.1002/adma.201902816 ↗
35. 10.1021/acs.nanolett.0c0129210.1021/acs.nanolett.0c01292 ↗
36. 10.1002/adma.20150504910.1002/adma.201505049 ↗
37. 10.1021/jp803478f10.1021/jp803478f ↗
38. 10.1021/jp406994v10.1021/jp406994v ↗
39. 10.1073/pnas.141871811210.1073/pnas.1418718112 ↗
40. 10.1002/smll.20190590110.1002/smll.201905901 ↗
41. 10.1021/jp056963810.1021/jp0569638 ↗
42. 10.1002/adma.20110110010.1002/adma.201101100 ↗
43. 10.1073/pnas.89.21.1012910.1073/pnas.89.21.10129 ↗
44. 10.1116/1.57773510.1116/1.577735 ↗
45. 10.1063/1.243241010.1063/1.2432410 ↗