journal article·2016-07Open access

DNA Origami: Folded DNA‐Nanodevices That Can Direct and Interpret Cell Behavior

Cathal J. Kearney, Christopher R. Lucas, Fergal J. O'Brien, Carlos E. Castro

Advanced Materials· Volume 28· Issue 27

Abstract

DNA origami is a DNA‐based nanotechnology that utilizes programmed combinations of short complementary oligonucleotides to fold a large single strand of DNA into precise 2D and 3D shapes. The exquisite nanoscale shape control of this inherently biocompatible material is combined with the potential to spatially address the origami structures with diverse cargoes including drugs, antibodies, nucleic acid sequences, small molecules, and inorganic particles. This programmable flexibility enables the fabrication of precise nanoscale devices that have already shown great potential for biomedical applications such as: drug delivery, biosensing, and synthetic nanopore formation. Here, the advances in the DNA‐origami field since its inception several years ago are reviewed with a focus on how these DNA‐nanodevices can be designed to interact with cells to direct or probe their behavior.
Source: crossref · Quality: baseline

Research context

OpenAlex topics: Advanced biosensing and bioanalysis techniques · RNA Interference and Gene Delivery · Plasmonic and Surface Plasmon Research

SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.

Affiliations

Department of Anatomy Tissue Engineering Research Group and Advanced Materials and Bioengineering Research Center Royal College of Surgeons in Ireland 123 St. Stephen's Green Dublin Ireland

Department of Mechanical and Aerospace Engineering The Ohio State University Columbus OH 43210 USA

Funding

Science Foundation Ireland · National Science Foundation

References (93)

Show source-provided references
1. 10.1038/171737a010.1038/171737a0 ↗
2. Pray L. · Nature Education · 2008 · 1 · 100
3. 10.1017/S001667230000123310.1017/S0016672300001233 ↗
4. 10.1016/0022-5193(82)90002-910.1016/0022-5193(82)90002-9 ↗
5. 10.1038/2899810.1038/28998 ↗
6. 10.1038/nature0458610.1038/nature04586 ↗
7. 10.1038/nature0230710.1038/nature02307 ↗
8. 10.1126/science.122726810.1126/science.1227268 ↗
9. 10.1038/nature1107510.1038/nature11075 ↗
10. 10.1002/adma.20130087510.1002/adma.201300875 ↗
11. 10.1002/smll.20140130910.1002/smll.201401309 ↗
12. 10.1016/j.tcb.2012.10.00110.1016/j.tcb.2012.10.001 ↗
13. 10.1038/nnano.2015.18010.1038/nnano.2015.180 ↗
14. 10.1038/nmeth.157010.1038/nmeth.1570 ↗
15. An individual double helix corresponds to 2 nm thus an idealized double helix should correspond to 4 nm. However an inter‐helix gap which is attributed to electrostatic repulsion between the coils of 1–1.5 nm is observed yielding the 6–7 nm.
16. 10.1021/nl050084f10.1021/nl050084f ↗
17. 10.1073/pnas.070093010410.1073/pnas.0700930104 ↗
18. 10.1038/nature0801610.1038/nature08016 ↗
19. 10.1021/ja906381y10.1021/ja906381y ↗
20. 10.1126/science.117425110.1126/science.1174251 ↗
21. 10.1038/nature0797110.1038/nature07971 ↗
22. 10.1126/science.120299810.1126/science.1202998 ↗
23. 10.1021/bi00064a00310.1021/bi00064a003 ↗
24. http://cando.dna‐origami.org/. This website is an open access resource that uses Finite Element Methods to evaluate the final deformed shape of DNA origami structures that users submit. Accessed: August 2015.
25. 10.1016/S0022-2836(65)80093-610.1016/S0022-2836(65)80093-6 ↗
26. 10.1021/nn900002m10.1021/nn900002m ↗
27. 10.1016/j.yexmp.2008.12.00410.1016/j.yexmp.2008.12.004 ↗
28. 10.1016/j.addr.2012.09.03310.1016/j.addr.2012.09.033 ↗
29. 10.1038/nmat377610.1038/nmat3776 ↗
30. 10.1038/nmat375810.1038/nmat3758 ↗
31. 10.1021/ja304263n10.1021/ja304263n ↗
32. 10.1021/nn502058j10.1021/nn502058j ↗
33. 10.1016/j.ejps.2014.03.00210.1016/j.ejps.2014.03.002 ↗
34. 10.1038/nnano.2012.7310.1038/nnano.2012.73 ↗
35. 10.1021/bm800479e10.1021/bm800479e ↗
36. 10.1021/nn800727x10.1021/nn800727x ↗
37. 10.1021/nl301877k10.1021/nl301877k ↗
38. 10.1038/nnano.2010.510.1038/nnano.2010.5 ↗
39. 10.1126/science.115008210.1126/science.1150082 ↗
40. 10.1021/ja910119810.1021/ja9101198 ↗
41. 10.1038/nature1088910.1038/nature10889 ↗
42. 10.1021/ja209861x10.1021/ja209861x ↗
43. 10.1021/nl101079u10.1021/nl101079u ↗
44. 10.1021/bm401172210.1021/bm4011722 ↗
45. 10.1021/nl101846810.1021/nl1018468 ↗
46. 10.1126/science.121408110.1126/science.1214081 ↗
47. 10.1038/nmeth.302510.1038/nmeth.3025 ↗
48. 10.1021/nn507035g10.1021/nn507035g ↗
49. 10.1021/ja901407j10.1021/ja901407j ↗
50. 10.1039/c2cc36185j10.1039/c2cc36185j ↗
51. 10.1016/j.ymeth.2014.01.01310.1016/j.ymeth.2014.01.013 ↗
52. 10.1016/j.jconrel.2012.03.02010.1016/j.jconrel.2012.03.020 ↗
53. 10.1021/nn302266210.1021/nn3022662 ↗
54. 10.1021/nn501191410.1021/nn5011914 ↗
55. 10.1056/NEJMoa090140910.1056/NEJMoa0901409 ↗
56. 10.1182/blood-2013-12-54097110.1182/blood-2013-12-540971 ↗
57. 10.1002/smll.20150211810.1002/smll.201502118 ↗
58. 10.1021/nn203161y10.1021/nn203161y ↗
59. 10.1021/nn202774x10.1021/nn202774x ↗
60. 10.1111/j.1365-2567.2007.02762.x10.1111/j.1365-2567.2007.02762.x ↗
61. 10.1016/j.biomaterials.2009.06.05310.1016/j.biomaterials.2009.06.053 ↗
62. 10.1038/3502052410.1038/35020524 ↗
63. 10.1038/nchem.95710.1038/nchem.957 ↗
64. 10.1021/nn303767b10.1021/nn303767b ↗
65. 10.1038/nnano.2009.8310.1038/nnano.2009.83 ↗
66. 10.1016/j.ymeth.2013.04.00210.1016/j.ymeth.2013.04.002 ↗
67. 10.1021/nl104083610.1021/nl1040836 ↗
68. 10.1039/b917661f10.1039/b917661f ↗
69. 10.1021/nn200557410.1021/nn2005574 ↗
70. 10.1021/nl500677j10.1021/nl500677j ↗
71. 10.1021/nl204098n10.1021/nl204098n ↗
72. 10.1002/anie.20120068810.1002/anie.201200688 ↗
73. 10.1021/nn401759r10.1021/nn401759r ↗
74. 10.1126/science.122562410.1126/science.1225624 ↗
75. 10.1002/anie.20140571910.1002/anie.201405719 ↗
76. 10.1039/C4NR04094E10.1039/C4NR04094E ↗
77. 10.1038/nnano.2013.9210.1038/nnano.2013.92 ↗
78. 10.1021/ac403661z10.1021/ac403661z ↗
79. 10.1021/nl103427w10.1021/nl103427w ↗
80. 10.1126/science.125094410.1126/science.1250944 ↗
81. 10.1038/nmeth.283510.1038/nmeth.2835 ↗
82. 10.1002/smll.20090044210.1002/smll.200900442 ↗
83. 10.1002/chem.20090305710.1002/chem.200903057 ↗
84. 10.1039/c0cc05306f10.1039/c0cc05306f ↗
85. 10.1021/nn103162710.1021/nn1031627 ↗
86. 10.1021/nl201603a10.1021/nl201603a ↗
87. 10.1038/nchem.208310.1038/nchem.2083 ↗
88. 10.1002/smll.20130045810.1002/smll.201300458 ↗
89. 10.1021/acs.nanolett.5b0018910.1021/acs.nanolett.5b00189 ↗
90. 10.1021/nl902535q10.1021/nl902535q ↗
91. 10.1039/c2cc32204h10.1039/c2cc32204h ↗
92. 10.1073/pnas.141302711110.1073/pnas.1413027111 ↗
93. 10.1073/pnas.140886911210.1073/pnas.1408869112 ↗