journal article·2024-05

Energetics and Kinetics of Membrane Permeation of Photoresists for Bioprinting

Lucas Diedrich, Matthias Brosz, Tobias Abele, Niklas Urbanek, Salome Steinke, Frauke Gräter, Kerstin Göpfrich, Camilo Aponte‐Santamaría

Advanced Functional Materials· Volume 34· Issue 20
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Abstract

Abstract 3D bioprinting is a promising technology which typically uses bioinks to pattern cells and their scaffolds. The selection of cytocompatible inks is critical for the printing success. In laser‐based 3D bioprinting, photoresist molecules are used as bioinks. However, the interaction of photoresists with lipid membranes and their permeation into the cell remains poorly understood. Here, molecular dynamics simulations and in vitro assays address this issue, retrieving partition coefficients, free energies, and permeabilities for twelve commonly used photoresists in model lipid bilayers. Crossing the hydrophobic center of the membrane constitutes the rate limiting step during permeation. In addition, three photoresists feature a preferential localization site at the acyl chain head group interface. Photoresist permeabilities range over ten orders of magnitude, with some molecules being membrane‐permeable on bioprinting timescales. Moreover, permeation correlates well with the oil–water partition coefficients and is severely hampered by the lipid ordering imposed by the lipid saturation. Overall, the mechanism of interaction of photoresists with model lipid bilayers is provided here, helping to classify them according to their residence in the membrane and permeation through it. This is useful information which will help guide the selection of cytocompatible photoresists for 3D bioprinting.
Source: crossref · Quality: baseline

Research context

OpenAlex topics: Photoreceptor and optogenetics research · Lipid Membrane Structure and Behavior · 3D Printing in Biomedical Research

SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.

Affiliations

Heidelberg Institute for Theoretical Studies Schloss‐Wolfsbrunnenweg 35 69118 Heidelberg Germany

Center for Molecular Biology of Heidelberg University (ZMBH) Heidelberg University Im Neuenheimer Feld 329 69120 Heidelberg Germany

Max Planck Institute for Medical Research Jahnstr. 29 69120 Heidelberg Germany

Funding

Deutsche Forschungsgemeinschaft · Hector Fellow Academy · Carl-Zeiss-Stiftung · Klaus Tschira Stiftung

References (81)

Show source-provided references
1. 10.1002/adma.20180811010.1002/adma.201808110 ↗
2. 10.1038/nbt.295810.1038/nbt.2958 ↗
3. 10.1021/acs.chemrev.0c0000810.1021/acs.chemrev.0c00008 ↗
4. Zhang J. · Int. J. Mol. Sci. · 2021 · 22 · 8
5. 10.1364/OL.22.00013210.1364/OL.22.000132 ↗
6. 10.1002/smll.20220095110.1002/smll.202200951 ↗
7. 10.1126/science.aaw902110.1126/science.aaw9021 ↗
8. 10.1002/adma.20160434210.1002/adma.201604342 ↗
9. 10.1126/sciadv.abc264810.1126/sciadv.abc2648 ↗
10. 10.1002/adhm.20210020610.1002/adhm.202100206 ↗
11. 10.1002/adma.20210670910.1002/adma.202106709 ↗
12. 10.1038/s41467-019-13432-710.1038/s41467-019-13432-7 ↗
13. 10.1021/acs.jctc.7b0026410.1021/acs.jctc.7b00264 ↗
14. 10.1038/s41598-021-81729-z10.1038/s41598-021-81729-z ↗
15. 10.1016/j.bpc.2014.01.00410.1016/j.bpc.2014.01.004 ↗
16. 10.1021/acs.jpcb.7b0291410.1021/acs.jpcb.7b02914 ↗
17. Magalhães N. · Molecules · 2022 · 27 · 4
18. 10.1016/S0887-2333(02)00003-610.1016/S0887-2333(02)00003-6 ↗
19. 10.1038/s41467-022-29272-x10.1038/s41467-022-29272-x ↗
20. 10.1038/s41557-019-0240-y10.1038/s41557-019-0240-y ↗
21. 10.1016/S0169-409X(00)00129-010.1016/S0169-409X(00)00129-0 ↗
22. 10.1038/nchem.124310.1038/nchem.1243 ↗
23. 10.1021/cc980007110.1021/cc9800071 ↗
24. G.Landrum P.Tosco B.Kelley Ric sriniker github gedeck github R.Vianello N.Schneider E.Kawashima A.Dalke Dan N D.Cosgrove B.Cole M.Swain S.Turk A.Savelyev G.Jones A.Vaucher M.Wójcikowski I.Take D.Probst K.Ujihara V. F.Scalfani guillaume godin github A.Pahl F.Berenger JLVarjo github strets123 github JP github DoliathGavid github rdkit/rdkit: Q1 2022 release 2022.
25. 10.1021/ci990307l10.1021/ci990307l ↗
26. 10.1021/cb500078u10.1021/cb500078u ↗
27. 10.1021/jacs.8b1113410.1021/jacs.8b11134 ↗
28. 10.1021/ja209292b10.1021/ja209292b ↗
29. 10.1002/chem.20170317610.1002/chem.201703176 ↗
30. 10.1038/s42004-019-0194-410.1038/s42004-019-0194-4 ↗
31. 10.1007/s10822-019-00267-z10.1007/s10822-019-00267-z ↗
32. 10.1007/s10822-021-00407-410.1007/s10822-021-00407-4 ↗
33. 10.1007/s10822-021-00397-310.1007/s10822-021-00397-3 ↗
34. 10.1063/1.496319210.1063/1.4963192 ↗
35. 10.1007/BF0187017610.1007/BF01870176 ↗
36. 10.1088/1367-2630/7/1/03410.1088/1367-2630/7/1/034 ↗
37. 10.1103/PhysRevE.74.02140210.1103/PhysRevE.74.021402 ↗
38. E.Overton Vierteljahrsschr. Naturforsch. Ges.1899 Zurich. 44 88–135 88.10.1002/mmnd.18990440112 ↗
39. 10.1007/BF0187012710.1007/BF01870127 ↗
40. 10.1080/0892702100372055310.1080/08927021003720553 ↗
41. 10.1021/acs.chemrev.8b0048610.1021/acs.chemrev.8b00486 ↗
42. 10.1088/1748-605X/ab954e10.1088/1748-605X/ab954e ↗
43. 10.1016/0005-2736(87)90282-310.1016/0005-2736(87)90282-3 ↗
44. 10.1038/s41589-020-00688-010.1038/s41589-020-00688-0 ↗
45. 10.1016/S0022-2275(20)36982-010.1016/S0022-2275(20)36982-0 ↗
46. 10.1038/nrm233010.1038/nrm2330 ↗
47. 10.1002/jcc.2094510.1002/jcc.20945 ↗
48. 10.1002/jcc.2482910.1002/jcc.24829 ↗
49. 10.1002/jcc.2136710.1002/jcc.21367 ↗
50. 10.1002/jcc.2613810.1002/jcc.26138 ↗
51. M. J.Frisch G. W.Trucks H. B.Schlegel G. E.Scuseria M. A.Robb J. R.Cheeseman G.Scalmani V.Barone B.Mennucci G. A.Petersson H.Nakatsuji M.Caricato X.Li H. P.Hratchian A. F.Izmaylov J.Bloino G.Zheng J. L.Sonnenberg M.Hada M.Ehara K.Toyota R.Fukuda J.Hasegawa M.Ishida T.Nakajima Y.Honda O.Kitao H.Nakai T.Vreven J. A.MontgomeryJr. et al. Gaussian09.
52. 10.1103/PhysRev.46.61810.1103/PhysRev.46.618 ↗
53. 10.1063/1.167752710.1063/1.1677527 ↗
54. 10.1016/0010-4655(95)00042-E10.1016/0010-4655(95)00042-E ↗
55. 10.1021/jp101759q10.1021/jp101759q ↗
56. 10.1021/jp973084f10.1021/jp973084f ↗
57. 10.1063/1.44586910.1063/1.445869 ↗
58. 10.1021/j100059a03810.1021/j100059a038 ↗
59. 10.1063/1.46671110.1063/1.466711 ↗
60. 10.1002/(SICI)1096-987X(199709)18:12<1463::AID-JCC4>3.0.CO;2-H10.1002/(SICI)1096-987X(199709)18:12<1463::AID-JCC4>3.0.CO;2-H ↗
61. 10.1002/jcc.54013080510.1002/jcc.540130805 ↗
62. 10.1016/j.cpc.2013.06.00310.1016/j.cpc.2013.06.003 ↗
63. 10.1080/0026897840010120110.1080/00268978400101201 ↗
64. 10.1103/PhysRevA.31.169510.1103/PhysRevA.31.1695 ↗
65. 10.1063/1.44811810.1063/1.448118 ↗
66. 10.1080/0026897830010285110.1080/00268978300102851 ↗
67. 10.1063/1.32869310.1063/1.328693 ↗
68. 10.1063/1.46439710.1063/1.464397 ↗
69. 10.1063/1.47011710.1063/1.470117 ↗
70. 10.1063/1.174965710.1063/1.1749657 ↗
71. 10.1023/A:102320821792510.1023/A:1023208217925 ↗
72. 10.1103/PhysRevLett.91.14060110.1103/PhysRevLett.91.140601 ↗
73. 10.1016/0009-2614(94)00397-110.1016/0009-2614(94)00397-1 ↗
74. 10.1016/j.bpj.2010.01.05110.1016/j.bpj.2010.01.051 ↗
75. 10.1002/jcc.2380410.1002/jcc.23804 ↗
76. 10.1021/acs.jctc.5b0093510.1021/acs.jctc.5b00935 ↗
77. 10.1016/j.bpj.2009.04.01310.1016/j.bpj.2009.04.013 ↗
78. 10.1021/ct100494z10.1021/ct100494z ↗
79. 10.1002/jcc.54013081210.1002/jcc.540130812 ↗
80. 10.1021/ja00092a04810.1021/ja00092a048 ↗
81. P.Virtanen R.Gommers T. E.Oliphant M.Haberland T.Reddy D.Cournapeau E.Burovski P.Peterson W.Weckesser J.Bright S. J.van derWalt M.Brett J.Wilson K. J.Millman N.Mayorov A. R. J.Nelson E.Jones R.Kern E.Larson C. J.Carey İ.Polat Y.Feng E. W.Moore J.VanderPlas D.Laxalde J.Perktold R.Cimrman I.Henriksen E. A.Quintero C. R.Harris et al. SciPy 1.0 Contributors Nat. Methods2020 17 261.