Electrochemical microneedle DNA-aptasensor for in vitro theophylline detection supported by molecular docking analysis
Source abstract
Abstract
An electrochemical aptasensor for theophylline detection was developed by integrating computational analysis, gold nanoparticle–modified screen-printed carbon electrodes (SPCE/AuNP), and hydrogel-forming microneedles. Molecular docking and molecular dynamics simulations confirmed the preferential and stable binding of the DNA aptamer to theophylline within a conserved stem–loop region, providing a molecular basis for selectivity. AuNP modification significantly enhanced electron-transfer kinetics and electroactive surface area, enabling sensitive signal transduction. The aptasensor exhibited a linear response in the range of 10–1000 μM with a detection limit of 0.39 μM and high reproducibility (%RSD 1.59%). Excellent selectivity was observed against common interferents. Integration with hydrogel microneedles enabled the detection of theophylline in spiked human blood, achieving a detection limit of 0.29 μM and satisfactory recovery. These results demonstrate the potential of the developed microneedle-assisted aptasensor as a minimally invasive platform for therapeutic drug monitoring of theophylline. • Microneedle-integrated electrochemical DNA aptasensor was developed using SPCE–Au for rapid and minimally invasive in vitro theophylline detection. • Molecular docking and dynamics simulations confirmed stable, selective aptamer–theophylline interactions with minimal interference from xanthine analogues. • The aptasensor achieved a detection limit of 0.39 μM , high reproducibility (RSD 1.59%), and supports SDGs 3 & 9 by enabling sustainable, point-of-care therapeutic monitoring.
Source: openalex_inverted_index · Quality: baseline
Research context
OpenAlex topics: Advanced biosensing and bioanalysis techniques · Electrochemical sensors and biosensors · Polyamine Metabolism and Applications
SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.
References (55)
Show source-provided references
1. 2025
2. Theophylline10.1164/rccm.201302-0388PP ↗
3. Anti-inflammatory dosing of theophylline in the treatment of status asthmaticus in children10.2147/JAA.S113747 ↗
4. Innovations in biosensor technologies for healthcare diagnostics and therapeutic drug monitoring: applications, recent progress, and future research challenges10.3390/s24165143 ↗
5. Integrated biosensor array for multiplex biomarkers cancer diagnosis via in-situ self-assembly carbon nanotubes with an ordered inverse-opal structure10.1016/j.bios.2024.116528 ↗
6. A multi-unit integrated electrochemical biosensor array for synergistic signal enhancing carbohydrate antigen 125 detection10.1016/j.snb.2023.134224 ↗
7. A review of antibody, aptamer, and nanomaterials synergistic systems for an amplified electrochemical signal10.3389/fbioe.2024.1361469 ↗
8. A BDD-Au/SPCE-based electrochemical DNA aptasensor for selective and sensitive detection of theophylline10.1016/j.diamond.2024.111725 ↗
9. Electrochemical aptasensor for ultrasensitive detection of glycated hemoglobin (HbA1c) using gold-modified SPCE
10. Precisely engineered honeycomb-like C-ZIF67 aptasensor array for integrated detection of multiple cardiac biomarkers in AMI diagnosis10.1016/j.bios.2025.118167 ↗
11. Disposable electrochemical aptasensor with mesoporous carbon spheres modified screen-printed dual-working electrodes for Pb2+ and Hg2+ detection10.1016/j.snb.2024.136558 ↗
12. The stability study of electrochemical aptasensor to detect SARS-CoV-2 spike protein and its application for clinical samples of nasopharyngeal swab10.22146/ijc.77887 ↗
13. Hand-in-hand RNA nanowire-based aptasensor for the detection of theophylline10.1016/j.bios.2017.10.025 ↗
14. A highly sensitive gold nanoparticle-based electrochemical aptasensor for theophylline detection10.1016/j.aca.2017.10.039 ↗
15. A self-assembling RNA aptamer-based graphene oxide sensor for the turn-on detection of theophylline in serum10.1016/j.bios.2016.06.024 ↗
16. An RNA aptamer photoelectrochemical biosensor based on the exciton energy transfer constructed for theophylline detection10.1016/j.ab.2024.115658 ↗
17. An RNA aptamer-based electrochemical biosensor for detection of theophylline in serum10.1021/ja711326b ↗
18. Whole blood theophylline measurements using an electrochemical DNA aptamer-based biosensor
19. A DNA aptamer for theophylline with ultrahigh selectivity reminiscent of the classic RNA aptamer10.1021/acschembio.2c00179 ↗
20. Case report: the risks associated with chronic theophylline therapy and measures designed to improve monitoring and management10.1186/s40360-016-0050-4 ↗
21. Current status and usefulness of therapeutic drug monitoring implementation of theophylline in elderly patients based on a nationwide database study and modeling approach10.1177/00368504241285122 ↗
22. Microneedles as a promising technology for disease monitoring and drug delivery: a review10.1021/acsmaterialsau.4c00125 ↗
23. Razzaghi
24. A wearable microneedle-based extended gate transistor for real-time detection of sodium in interstitial fluids
25. Novel hollow biodegradable microneedle for amphotericin B delivery10.1002/mco2.321 ↗
26. Microneedles-based electrochemical sensors: new tools for advanced biosensing10.1016/j.coelec.2019.05.012 ↗
27. Continuous opioid monitoring along with nerve agents on a wearable microneedle sensor array10.1021/jacs.0c01883 ↗
28. Lab under the skin: Microneedle based wearable devices10.1002/adhm.202002255 ↗
29. Microneedle-integrated screen-printed electrode modified with gold nanoparticle-boron-doped diamond nanoparticle nanocomposites for electrochemical theophylline detection
30. Molecular docking and molecular dynamics simulation
31. Enhancing aptamer selection in alzheimer's disease: integrating structure prediction and molecular dynamics simulations10.1038/s41598-025-12186-1 ↗
32. Experimentally verified flexible molecular docking and dynamic simulation of aptamer with intracellular proteins based on direct DNA 3D structure prediction10.1016/j.ijbiomac.2025.144318 ↗
33. Design and prediction of aptamers assisted by in silico methods10.3390/biomedicines11020356 ↗
34. Molecular dynamics simulation to study protein conformation and ligand interaction
35. Gromacs 3.0: a package for molecular simulation and trajectory analysis10.1007/s008940100045 ↗
36. Optimization of the CHARMM additive force field for DNA: improved treatment of the BI/BII conformational equilibrium10.1021/ct200723y ↗
37. CHARMM36m: an improved force field for folded and intrinsically disordered proteins10.1038/nmeth.4067 ↗
38. CHARMM general force field: a force field for drug-like molecules compatible with the CHARMM all-atom additive biological force fields10.1002/jcc.21367 ↗
39. Comparison of simple potential functions for simulating liquid water10.1063/1.445869 ↗
40. Particle mesh ewald: an N·log(N) method for ewald sums in large systems10.1063/1.464397 ↗
41. Validation of molecular dynamics simulations for prediction of three-dimensional structures of small proteins10.3390/molecules22101716 ↗
42. Potentiostatic electrodeposition of gold nanoparticles: variation of electrocatalytic activity toward four targets10.1007/s10800-021-01604-7 ↗
43. Multiplex signal amplification for ultrasensitive CRP assay via integrated electrochemical biosensor array using MOF-Derived carbon material and aptamers10.1016/j.talanta.2024.125735 ↗
44. A portable and cost-effective paper-based electrochemical impedance aptasensor for sensitive Pb2+ detection10.1016/j.electacta.2025.147188 ↗
45. Optimization of the electrodeposition of gold nanoparticles for the application of highly sensitive, label-free biosensor10.3390/bios9020050 ↗
46. Enhancing catalytic activity of gold nanoparticles in a standard redox reaction by investigating the impact of AuNPs size, temperature and reductant concentrations10.1038/s41598-023-38234-2 ↗
47. Electrochemical oxidation of theophylline at multi-wall carbon nanotube modified glassy carbon electrodes10.1016/j.jelechem.2005.05.004 ↗
48. Phosphodiesterase-4 inhibitors and theophylline10.1016/B978-032304289-5.10030-X ↗
49. A label-free electrochemical RNA aptamer for selective detection of theophylline10.1016/j.elecom.2009.12.022 ↗
50. Optimization of the electrochemical RNA-aptamer based biosensor for theophylline by using a methylene blue redox label10.1002/elan.200804558 ↗
51. Electrochemical sensing platform based on carbon dots for the simultaneous determination of theophylline and caffeine in tea10.3390/s23187731 ↗
52. Simultaneous voltammetric detection of six biomolecules using a nanocomposite of titanium dioxide nanorods with multi-walled carbon nanotubes10.1016/j.electacta.2020.137094 ↗
53. An electrochemical sensor of theophylline on a boron-doped diamond electrode modified with nickel nanoparticles10.3390/s23208597 ↗
54. Versatility of hydrogel-forming microneedles in in vitro transdermal delivery of tuberculosis drugs10.1016/j.ejpb.2020.12.003 ↗
55. Engineering of PVA/PVP hydrogels for agricultural applications10.3390/gels9110895 ↗