journal article·2015-01

Hydration and aggregation of lysozyme by extended frequency range depolarized light scattering

S. Perticaroli, L. Comez, P. Sassi, M. Paolantoni, S. Corezzi, S. Caponi, A. Morresi, D. Fioretto

Publisher page

Abstract

Extended frequency range depolarized light scattering is a spectroscopic technique operating in the GHz-THz range that, applied to aqueous solutions of biomolecules, is able to disentangle the dynamics of the solute from that of water, and relaxation processes of bulk from those of hydration water. Experiments performed on aqueous solution of a variety of biological systems of different nature, such as small hydrophobic and hydrophilic molecules, amino acids, dipeptides, and proteins, have shown that a significant increase in the dynamical retardation and in the extent of the perturbation of water surrounding solute molecules occurs at increasing chemical complexity of the solute. The behavior of aqueous solutions of lysozyme is here analyzed in detail, as a function of solute concentration. Our results provide evidence of a dynamical perturbation extending over more than three water layers in diluted solutions. We find a strong reduction in the average hydration number at increasing solute concentration that cannot be explained by the random superposition of hydration layers among lysozyme molecules in close proximity. This behavior is consistent with the formation of clusters in solution. © 2014 Elsevier B.V.
Source: openaire · Quality: candidate unverified · Source record ↗

Research context

OpenAlex topics: Spectroscopy and Quantum Chemical Studies · Molecular spectroscopy and chirality · Material Dynamics and Properties

SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.

References (60)

Show source-provided references
1. Water as an active constituent in cell biology10.1021/cr068037a ↗
2. Do we underestimate the importance of water in cell biology?10.1038/nrm2021 ↗
3. Interfaces and the driving force of hydrophobic assembly10.1038/nature04162 ↗
4. Protein hydration dynamics in solution: a critical survey10.1098/rstb.2004.1499 ↗
5. Terahertz absorption of dilute aqueous solutions10.1063/1.4772000 ↗
6. Microscopic mechanism of protein cryopreservation in an aqueous solution with trehalose10.1038/srep01218 ↗
7. Dynamics of water in biological recognition10.1021/cr020689l ↗
8. Hydration of lysozyme studied by Raman spectroscopy10.1021/jp4017954 ↗
9. Hydration properties of ligands and drugs in protein binding sites: tightly-bound, bridging water molecules and their effects and consequences on molecular design strategies10.1021/ci3005786 ↗
10. Evidence of coexistence of change of caged dynamics at Tgand the dynamic transition at Tdin solvated proteins10.1021/jp2057892 ↗
11. Nature of the water specific relaxation in hydrated proteins and aqueous mixtures10.1016/j.chemphys.2013.05.018 ↗
12. Effect of ion pairing on the solution dynamics investigated by the simulations of the optical Kerr effect and the dielectric relaxation spectra10.1021/jp404923y ↗
13. Communication: protein dynamical transition vs. liquid–liquid phase transition in protein hydration water10.1063/1.4822250 ↗
14. Resolving the ambiguity of the dynamics of water and clarifying its role in hydrated proteins10.1080/14786435.2010.523716 ↗
15. Protein–water electrostatics and principles of bioenergetics10.1039/c0cp01004a ↗
16. Protein hydration dynamics and molecular mechanism of coupled water–protein fluctuations10.1021/ja902918p ↗
17. Efficient method to characterize the context-dependent hydrophobicity of proteins10.1021/jp4081977 ↗
18. Temperature dependence of hydrophobic hydration dynamics: from retardation to acceleration10.1021/jp408603n ↗
19. Specific ion effects in amphiphile hydration and interface stabilization10.1021/ja4120117 ↗
20. Slow dynamics of water molecules on the surface of a globular protein10.1039/fd9960300281 ↗
21. Hydration dynamics near a model protein surface10.1016/S0006-3495(04)74252-6 ↗
22. Time scales of water dynamics at biological interfaces: peptides, proteins and cells10.1039/B806194G ↗
23. Hydration and mobility of trehalose in aqueous solution10.1021/jp304982c ↗
24. Magnitude and molecular origin of water slowdown next to a protein10.1021/ja3007897 ↗
25. Biomolecular hydration dynamics: a jump model perspective10.1039/c3cs60091b ↗
26. Disaccharide topology induces slowdown in local water dynamics10.1021/jp112178c ↗
27. The terahertz dance of water with the proteins: the effect of protein flexibility on the dynamical hydration shell of ubiquitin10.1039/B804734K ↗
28. Terahertz spectral domain computational analysis of hydration shell of proteins with increasingly complex tertiary structure10.1021/jp407580y ↗
29. Analysis of the hydration water around bovine serum albumin using terahertz coherent synchrotron radiation10.1021/jp407410g ↗
30. Crowding induced collective hydration of biological macromolecules over extended distances10.1021/ja407858c ↗
31. Separate dynamics of solute and solvent in water–glucose solutions by depolarized light scattering10.1016/j.cplett.2007.05.025 ↗
32. Structural and dynamical properties of glucose aqueous solutions by depolarized Rayleigh scattering10.1002/jrs.1909 ↗
33. More is different: experimental results on the effect of biomolecules on the dynamics of hydration water10.1021/jz400360v ↗
34. Hydration and aggregation in mono- and disaccharide aqueous solutions by gigahertz-to-terahertz light scattering and molecular dynamics simulations10.1021/jp3079869 ↗
35. Dynamics of biological water: insights from molecular modeling of light scattering in aqueous trehalose solutions10.1021/jp301988f ↗
36. Broadband depolarized light scattering study of diluted protein aqueous solutions10.1021/jp101896f ↗
37. Light scattering spectra of water in trehalose aqueous solutions: evidence for two different solvent relaxation processes10.1021/jp9004983 ↗
38. Dynamics of hydration water in sugars and peptides solutions10.1021/jp403665w ↗
39. Equilibrium cluster formation in concentrated protein solutions and colloids10.1038/nature03109 ↗
40. Modeling equilibrium clusters in lysozyme solutions10.1209/0295-5075/77/48004 ↗
41. Absence of equilibrium cluster phase in concentrated lysozyme solutions10.1073/pnas.0711928105 ↗
42. Formation of the dynamic clusters in concentrated lysozyme protein solutions10.1021/jz900127c ↗
43. Lysozyme protein solution with an intermediate range order structure10.1021/jp109333c ↗
44. Cluster-driven dynamical arrest in concentrated lysozyme solutions10.1021/jp112180p ↗
45. Progress in liquid and glass physics by Brillouin scattering spectroscopy10.1016/B978-0-12-397028-2.00001-1 ↗
46. Low-frequency spectroscopic studies and intermolecular vibrational energy transfer in liquids10.1039/pc093057 ↗
47. Dynamics of supercooled water: mode-coupling theory approach10.1103/PhysRevB.51.12865 ↗
48. Intermolecular polarizability dynamics of aqueous formamide liquid mixtures studied by molecular dynamics simulations10.1063/1.2446782 ↗
49. A simulation study of the optical Kerr effect in liquid water10.1039/b417147k ↗
50. Low-frequency modes of peptides and globular proteins in solution observed by ultrafast OHD-RIKES spectroscopy10.1016/S0006-3495(03)74618-9 ↗
51. Influence of hydration on protein dynamics: combining dielectric and neutron scattering spectroscopy data10.1021/jp8059807 ↗
52. Taschin · 2013
53. Structural relaxation in supercooled water by time-resolved spectroscopy10.1038/nature02409 ↗
54. Extended frequency range depolarized light scattering study of N-acetyl-leucine-methylamide–water solutions10.1021/ja202272k ↗
55. Solvent sharing models for non-interacting solute molecules: the case of glucose and trehalose water solutions10.1007/s11483-013-9306-3 ↗
56. Role of hydrophobic interactions on the stabilisation of native state of globular proteins10.1016/S0009-2614(00)00589-3 ↗
57. Biomolecular hydration: from water dynamics to hydrodynamics10.1073/pnas.2033320100 ↗
58. Low-frequency vibrational properties of lysozyme in sugar aqueous solutions: a Raman scattering and molecular dynamics simulation study10.1063/1.3273218 ↗
59. Lysozyme hydration in concentrated aqueous solutions. Effect of an equilibrium cluster phase10.1021/jp308863h ↗
60. Connecting irreversible to reversible aggregation: time and temperature10.1021/jp809031d ↗