journal article·2023-09-12

Ester Bond: Chemically Labile Yet Mechanically Stable

Hai Lei, Quan Ma, Zhangxia Wang, Di Zhang, Xiaoyu Huang, Meng Qin, Haibo Ma, Wei Wang, Yi Cao

ACS Nano· Volume 17· Issue 17
Publisher page

Abstract

Due to the dynamic nature of ester linkages, ester-bond-containing materials are well known for their outstanding degradability and stimuli responsiveness. However, whether ester hydrolysis is affected by mechanical forces remains unclear. Here, we develop a single-molecule assay to quantitatively study the force-dependent ester hydrolysis using an engineered circular permutant protein with a caged ester bond as a model. Our single-molecule force spectroscopy results show that the ester hydrolysis rate is surprisingly insensitive to forces, with a ∼7 s –1 dissociation rate that remains almost unchanged in the force range of 80 to 200 pN. Quantum calculations reveal that the ester hydrolysis involves an intermediate state formed by either H 3 O + - or OH – -bonded tetrahedral intermediates. The measured ester-hydrolysis kinetics at the single-molecule level may primarily correspond to the rupture of these intermediate states. However, the rate-limiting step appears to be the formation of the tetrahedral intermediates, which cannot be quantitatively characterized in our experiments. Nonetheless, based on the quantum calculations, this step is also insensitive to applied forces. Altogether, our study suggests that the ester bond is chemically labile yet mechanically stable, serving as the basis for the design of responsive materials using ester bonds as mechanically inert units.
Source: openalex_inverted_index · Quality: baseline

Research context

OpenAlex topics: Protein Structure and Dynamics · Force Microscopy Techniques and Applications · Biochemical and Structural Characterization

SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.

Affiliations

Collaborative Innovation Center of Advanced Microstructures, National Laboratory of Solid State Microstructure, Department of Physics, Nanjing University, Nanjing 210093, China

School of Physics, Zhejiang University, Hangzhou 310027, China

Institute for Advanced Study in Physics, Zhejiang University, Hangzhou 310027, China

Zhejiang Laboratory, Hangzhou, Zhejiang 311121, China

School of Chemistry and Chemical Engineering, Nanjing University, Nanjing 210023, China

Qingdao Institute for Theoretical and Computational Sciences, Qingdao Institute of Frontier and Interdisciplinary Science, Shandong University, Qingdao 266237, China

Jinan Microecological Biomedicine Shandong Laboratory, Jinan 250021, China

Funding

National Key Research and Development Program of China · China Postdoctoral Science Foundation · National Natural Science Foundation of China

References (42)

Show source-provided references
1. 10.1038/nature1347410.1038/nature13474 ↗
2. 10.1038/nrendo.2016.9810.1038/nrendo.2016.98 ↗
3. 10.1021/acs.chemrev.8b0000610.1021/acs.chemrev.8b00006 ↗
4. 10.1021/jacs.9b1248210.1021/jacs.9b12482 ↗
5. 10.1016/j.jhazmat.2020.12502610.1016/j.jhazmat.2020.125026 ↗
6. 10.2174/138920371566614022815380110.2174/1389203715666140228153801 ↗
7. 10.31635/ccschem.021.20210098510.31635/ccschem.021.202100985 ↗
8. 10.1038/s41570-020-00249-y10.1038/s41570-020-00249-y ↗
9. 10.1073/pnas.051103510310.1073/pnas.0511035103 ↗
10. 10.1038/nchem.263210.1038/nchem.2632 ↗
11. 10.1038/nature0623110.1038/nature06231 ↗
12. 10.1126/science.aan102610.1126/science.aan1026 ↗
13. 10.1038/s41557-020-00586-x10.1038/s41557-020-00586-x ↗
14. 10.1038/nsmb.162710.1038/nsmb.1627 ↗
15. 10.1016/j.polymdegradstab.2007.12.01510.1016/j.polymdegradstab.2007.12.015 ↗
16. 10.1007/s10237-009-0168-z10.1007/s10237-009-0168-z ↗
17. 10.1016/0142-9612(84)90037-110.1016/0142-9612(84)90037-1 ↗
18. 10.1002/jbm.a.1058410.1002/jbm.a.10584 ↗
19. 10.1002/jbm.a.2008110.1002/jbm.a.20081 ↗
20. 10.1002/pen.2117310.1002/pen.21173 ↗
21. 10.1016/0142-9612(93)90063-810.1016/0142-9612(93)90063-8 ↗
22. 10.1021/acs.macromol.2c0178910.1021/acs.macromol.2c01789 ↗
23. 10.1002/anie.20130074610.1002/anie.201300746 ↗
24. 10.1002/anie.20090151110.1002/anie.200901511 ↗
25. 10.1039/C9CS00855A10.1039/C9CS00855A ↗
26. 10.1038/nchem.218510.1038/nchem.2185 ↗
27. 10.1038/s41557-018-0209-210.1038/s41557-018-0209-2 ↗
28. 10.1021/acs.chemrev.0c0130410.1021/acs.chemrev.0c01304 ↗
29. 10.1039/c0cp02827d10.1039/c0cp02827d ↗
30. 10.1038/s41467-021-25425-610.1038/s41467-021-25425-6 ↗
31. 10.1073/pnas.131685511110.1073/pnas.1316855111 ↗
32. 10.1038/s41586-021-03819-210.1038/s41586-021-03819-2 ↗
33. 10.1038/nprot.2010.4910.1038/nprot.2010.49 ↗
34. 10.1126/science.aar209410.1126/science.aar2094 ↗
35. 10.1038/nmat182510.1038/nmat1825 ↗
36. 10.1529/biophysj.107.12829810.1529/biophysj.107.128298 ↗
37. 10.1038/nprot.2013.05610.1038/nprot.2013.056 ↗
38. Segel I. H. · 1993
39. 10.1016/j.mattod.2014.01.01910.1016/j.mattod.2014.01.019 ↗
40. 10.1021/jp810292n10.1021/jp810292n ↗
41. 10.1021/jo400258w10.1021/jo400258w ↗
42. 10.1021/jo400259610.1021/jo4002596 ↗