journal article·2026-01-13

Automated and Parallelized Microfluidic Generation of Large and Precisely Defined Lipid Nanoparticle Libraries

Andrew R. Hanna, Sarah J. Shepherd, Gregory A. Datto, Rakan El-Mayta, Taigh Anderson, Isabel B. Navarro, Adele S. Ricciardi, Marshall S. Padilla, Neha Srikumar, Shuran Zhang, Hannah M. Yamagata, Nova Y. Meng, Joshua R. Buser, Mohamad-Gabriel Alameh, Michael J. Mitchell, David A. Issadore

ACS Nano· Volume 20· Issue 1
Publisher page

Abstract

Lipid nanoparticles (LNPs) are being developed for a broad set of therapeutic applications by changing both the structures of the lipids used to formulate each LNP and their relative proportions. Because lipid synthesis and in vivo screening have been parallelized using combinatorial chemistry and LNP barcoding, respectively, the manual and sequential microfluidic formulation of LNPs remains the primary rate-limiting step during early-stage discovery. In this work, we present a parallelized, automated microfluidic platform capable of generating large, precisely defined LNP libraries in parallel, with throughput on the order of 1000 distinct formulations per hour. Each formulation is defined by varying the reagent flow ratios into one of eight microscale mixers using lithographically encoded fluidic resistors and dynamically controlled external pressure supplies. The microfluidic chip is integrated with custom robotic plate handling for the rapid collection of each distinct formulation. To evaluate this platform, we characterized 96 formulations generated on-chip in terms of both physicochemical properties and transfection efficiency in vitro. We further validated our lead candidate against the state of the art in vivo. We demonstrate the ability to rapidly discover a formulation and scale its production to liters per hour under identical mixing conditions, bridging from early discovery to manufacturing through microfluidic parallelization.
Source: openalex_inverted_index · Quality: baseline

Research context

OpenAlex topics: 3D Printing in Biomedical Research · Advancements in Transdermal Drug Delivery · Innovative Microfluidic and Catalytic Techniques Innovation

SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.

Affiliations

Department of Bioengineering, School of Engineering and Applied Science

University of Pennsylvania

Children’s Hospital of Philadelphia

Department of Biochemistry and Biophysics

Consonant Systems, LLC

Funding

National Science Foundation Graduate Research Fellowship Program · Wellcome Leap · University of Pennsylvania · Cystic Fibrosis Foundation · American Cancer Society · Division of Chemical, Bioengineering, Environmental, and Transport Systems · Burroughs Wellcome Fund · National Institutes of Health · Division of Materials Research

References (76)

Show source-provided references
1. 10.1126/science.adk942810.1126/science.adk9428 ↗
2. 10.1002/adma.20190257510.1002/adma.201902575 ↗
3. 10.1038/s41586-021-03534-y10.1038/s41586-021-03534-y ↗
4. 10.1021/acs.nanolett.9b0424610.1021/acs.nanolett.9b04246 ↗
5. 10.1002/adma.20231322610.1002/adma.202313226 ↗
6. 10.1021/acs.nanolett.5b0249710.1021/acs.nanolett.5b02497 ↗
7. 10.1038/s41467-024-45666-510.1038/s41467-024-45666-5 ↗
8. 10.1021/acsnano.8b0151610.1021/acsnano.8b01516 ↗
9. 10.1021/acs.molpharmaceut.3c0039010.1021/acs.molpharmaceut.3c00390 ↗
10. 10.1021/acs.nanolett.0c0138610.1021/acs.nanolett.0c01386 ↗
11. 10.1021/acsnano.3c0118610.1021/acsnano.3c01186 ↗
12. 10.1038/s41578-025-00831-010.1038/s41578-025-00831-0 ↗
13. 10.1016/j.cobme.2018.08.00110.1016/j.cobme.2018.08.001 ↗
14. 10.1038/s41587-023-01679-x10.1038/s41587-023-01679-x ↗
15. 10.1038/s41565-023-01404-410.1038/s41565-023-01404-4 ↗
16. 10.1038/s41565-024-01747-610.1038/s41565-024-01747-6 ↗
17. 10.1073/pnas.162087411410.1073/pnas.1620874114 ↗
18. 10.1073/pnas.181127611510.1073/pnas.1811276115 ↗
19. 10.1038/s41467-024-50619-z10.1038/s41467-024-50619-z ↗
20. 10.1039/D1NA00712B10.1039/D1NA00712B ↗
21. 10.1146/annurev.fluid.29.1.43510.1146/annurev.fluid.29.1.435 ↗
22. 10.1016/j.ejpb.2023.10.00610.1016/j.ejpb.2023.10.006 ↗
23. 10.1016/j.biomaterials.2021.12082610.1016/j.biomaterials.2021.120826 ↗
24. 10.1073/pnas.230356712010.1073/pnas.2303567120 ↗
25. 10.1038/nnano.2012.16810.1038/nnano.2012.168 ↗
26. 10.1371/journal.pone.018796210.1371/journal.pone.0187962 ↗
27. 10.1126/science.106623810.1126/science.1066238 ↗
28. Cui, H.; Xu, Y.; Pang, K.; Li, G.; Gong, F.; Wang, B.; Li, B. LUMI-lab: A Foundation Model-Driven Autonomous Platform Enabling Discovery of New Ionizable Lipid Designs for mRNA Delivery . 2025.10.1101/2025.02.14.638383 ↗
29. 10.1038/s41467-018-03515-210.1038/s41467-018-03515-2 ↗
30. Bruus H. · 2007
31. 10.1038/s41551-021-00786-x10.1038/s41551-021-00786-x ↗
32. 10.1021/acsnano.4c0761510.1021/acsnano.4c07615 ↗
33. 10.1038/s41565-025-01958-510.1038/s41565-025-01958-5 ↗
34. 10.1039/c2lc21033a10.1039/c2lc21033a ↗
35. 10.1038/s41563-024-01867-310.1038/s41563-024-01867-3 ↗
36. 10.1021/acs.nanolett.1c0250310.1021/acs.nanolett.1c02503 ↗
37. 10.1039/D4NR01332H10.1039/D4NR01332H ↗
38. 10.1186/s40486-018-0075-010.1186/s40486-018-0075-0 ↗
39. 10.1021/acs.analchem.9b0498610.1021/acs.analchem.9b04986 ↗
40. 10.1039/b513524a10.1039/b513524a ↗
41. Tabeling, P.; Tabeling, P. Introduction to Microfluidics ; Oxford University Press, 2023; p 0.10.1093/oso/9780192845306.001.0001 ↗
42. 10.1038/s41598-022-13112-510.1038/s41598-022-13112-5 ↗
43. 10.1038/mtna.2012.2810.1038/mtna.2012.28 ↗
44. 10.1021/acsnano.4c0234110.1021/acsnano.4c02341 ↗
45. 10.1016/j.jcis.2024.08.06110.1016/j.jcis.2024.08.061 ↗
46. 10.1021/acsnano.4c0451910.1021/acsnano.4c04519 ↗
47. 10.1073/pnas.242660112210.1073/pnas.2426601122 ↗
48. 10.1073/pnas.172054211510.1073/pnas.1720542115 ↗
49. 10.1038/mtna.2013.6610.1038/mtna.2013.66 ↗
50. 10.1016/j.omtn.2019.01.01310.1016/j.omtn.2019.01.013 ↗
51. 10.1002/jcph.155310.1002/jcph.1553 ↗
52. 10.1016/j.jconrel.2016.05.05910.1016/j.jconrel.2016.05.059 ↗
53. 10.1073/pnas.230780912110.1073/pnas.2307809121 ↗
54. 10.1021/ja301621z10.1021/ja301621z ↗
55. 10.1021/acs.nanolett.1c0135310.1021/acs.nanolett.1c01353 ↗
56. 10.1073/pnas.091060310610.1073/pnas.0910603106 ↗
57. 10.1038/ncomms527710.1038/ncomms5277 ↗
58. 10.1021/acsnano.4c1296510.1021/acsnano.4c12965 ↗
59. 10.1126/science.aai897710.1126/science.aai8977 ↗
60. 10.1038/s41598-019-48515-410.1038/s41598-019-48515-4 ↗
61. 10.1021/ac034640710.1021/ac0346407 ↗
62. 10.1038/s41467-024-55072-610.1038/s41467-024-55072-6 ↗
63. 10.1021/nn301922x10.1021/nn301922x ↗
64. 10.1038/s41467-024-45537-z10.1038/s41467-024-45537-z ↗
65. 10.1038/s41467-022-31993-y10.1038/s41467-022-31993-y ↗
66. 10.1021/acs.molpharmaceut.2c0003310.1021/acs.molpharmaceut.2c00033 ↗
67. 10.1080/17460441.2021.182643310.1080/17460441.2021.1826433 ↗
68. STAR H. Hamilton Microlab STAR Liquid Handler , 2023.
69. 10.1038/s41551-023-01030-410.1038/s41551-023-01030-4 ↗
70. 10.1021/acs.nanolett.4c0664310.1021/acs.nanolett.4c06643 ↗
71. Smith, M.; Auer, J.; Skinner, B. Methods of Preparing Lipid Nanoparticles. WO2020160397A1, 2021.
72. 10.1038/s41591-023-02785-810.1038/s41591-023-02785-8 ↗
73. 10.1186/s12967-024-06052-310.1186/s12967-024-06052-3 ↗
74. 10.1038/s41587-025-02855-x10.1038/s41587-025-02855-x ↗
75. 10.1038/s41587-024-02490-y10.1038/s41587-024-02490-y ↗
76. Hanna, A. R.; Shepherd, S. J.; Datto, G. A.; Navarro, I. B.; Ricciardi, A. S.; Padilla, M. S.; Srikumar, N.; Zhang, S.; Yamagata, H. M.; Meng, N. Y.; Buser, J. R.; Mitchell, M. J.; Issadore, D. A. Automated and Parallelized Microfluidic Generation of Large and Precisely-Defined Lipid Nanoparticle Libraries . 2025; (accessed Dec 15, 2025).10.1101/2025.05.26.656157 ↗