journal article·2020-10

A Simple Blocking PCR‐Based Method for the Synthesis of High‐Copy dsDNA Tandem Repeats

Xin Wang, Xuerui Yang

Small· Volume 16· Issue 43
Publisher page

Abstract

Abstract DNA tandem repeats are frequently found in eukaryotic genomes. High‐copy DNA repeats can serve as building blocks of complex DNA structures, but the in vitro synthesis of DNA repeats has been challenging due to complicated procedures and the high cost. Here, a new, simple method is developed using the strategy of blocking polymerase chain reaction for highly efficient DNA repeat expansion (BPRE). With BPRE, dsDNA fragments composed of more than 40 copies of the repeat sequence can be quickly produced, while the cost is reduced by at least 90%. As a typical application, reannealing of the dsDNA repeats generates elastic hydrogels, which shows a high capacity for doxycycline absorption and prolonged release.
Source: crossref · Quality: baseline

Research context

OpenAlex topics: RNA and protein synthesis mechanisms · RNA Research and Splicing · CRISPR and Genetic Engineering

SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.

Affiliations

MOE Key Laboratory of Bioinformatics Tsinghua University Beijing 100084 China

Center for Synthetic and Systems Biology Tsinghua University Beijing 100084 China

School of Life Sciences Tsinghua University Beijing 100084 China

Funding

National Basic Research Program of China · National Natural Science Foundation of China

References (32)

Show source-provided references
1. 10.1371/journal.pgen.100238410.1371/journal.pgen.1002384 ↗
2. 10.1128/MMBR.00011-0810.1128/MMBR.00011-08 ↗
3. 10.1038/ncomms806510.1038/ncomms8065 ↗
4. 10.1093/nar/gkx123010.1093/nar/gkx1230 ↗
5. 10.1038/s41565-018-0168-110.1038/s41565-018-0168-1 ↗
6. 10.1073/pnas.172220611510.1073/pnas.1722206115 ↗
7. 10.1038/nnano.2012.21110.1038/nnano.2012.211 ↗
8. 10.1038/s41467-018-06864-010.1038/s41467-018-06864-0 ↗
9. 10.1038/s41467-019-08428-210.1038/s41467-019-08428-2 ↗
10. 10.1039/C6CC04724F10.1039/C6CC04724F ↗
11. 10.1002/adma.20180653810.1002/adma.201806538 ↗
12. 10.1021/acs.accounts.6b0052410.1021/acs.accounts.6b00524 ↗
13. 10.1039/C7CC00636E10.1039/C7CC00636E ↗
14. 10.1039/c3cs60439j10.1039/c3cs60439j ↗
15. 10.1021/acs.accounts.6b0041710.1021/acs.accounts.6b00417 ↗
16. 10.1038/nmat174110.1038/nmat1741 ↗
17. 10.1002/smll.20180555210.1002/smll.201805552 ↗
18. 10.1126/sciadv.aaw059010.1126/sciadv.aaw0590 ↗
19. 10.1002/smll.20100162010.1002/smll.201001620 ↗
20. 10.1039/b803083a10.1039/b803083a ↗
21. 10.1016/j.bios.2014.06.06610.1016/j.bios.2014.06.066 ↗
22. 10.1038/sj.onc.120883210.1038/sj.onc.1208832 ↗
23. 10.1371/journal.pone.012346810.1371/journal.pone.0123468 ↗
24. 10.1038/nchembio.41610.1038/nchembio.416 ↗
25. 10.1128/MMBR.62.2.275-293.199810.1128/MMBR.62.2.275-293.1998 ↗
26. 10.1021/la302799s10.1021/la302799s ↗
27. 10.1093/nar/2.3.38310.1093/nar/2.3.383 ↗
28. 10.1016/0003-2697(86)90413-610.1016/0003-2697(86)90413-6 ↗
29. 10.1016/0890-8508(89)90009-110.1016/0890-8508(89)90009-1 ↗
30. 10.1038/s41598-017-07210-y10.1038/s41598-017-07210-y ↗
31. 10.1002/anie.20070598210.1002/anie.200705982 ↗
32. Sambrook J. · Cold Spring Harbor Protoc. · 2006