journal article·2022-03

Protein Needles Designed to Self‐Assemble through Needle Tip Engineering

Kosuke Kikuchi, Tatsuya Fukuyama, Takayuki Uchihashi, Tadaomi Furuta, Yusuke T. Maeda, Takafumi Ueno

Small· Volume 18· Issue 10
Publisher page

Abstract

Abstract The dynamic process of formation of protein assemblies is essential to form highly ordered structures in biological systems. Advances in structural and synthetic biology have led to the construction of artificial protein assemblies. However, development of design strategies exploiting the anisotropic shape of building blocks of protein assemblies has not yet been achieved. Here, the 2D assembly pattern of protein needles (PNs) is controlled by regulating their tip‐to‐tip interactions. The PN is an anisotropic needle‐shaped protein composed of β‐helix, foldon, and His‐tag. Three different types of tip‐modified PNs are designed by deleting the His‐tag and foldon to change the protein–protein interactions. Observing their assembly by high‐speed atomic force microscopy (HS‐AFM) reveals that PN, His‐tag deleted PN, and His‐tag and foldon deleted PN form triangular lattices, the monomeric state with nematic order, and fiber assemblies, respectively, on a mica surface. Their assembly dynamics are observed by HS‐AFM and analyzed by the theoretical models. Monte Carlo (MC) simulations indicate that the mica‐PN interactions and the flexible and multipoint His‐tag interactions cooperatively guide the formation of the triangular lattice. This work is expected to provide a new strategy for constructing supramolecular protein architectures by controlling directional interactions of anisotropic shaped proteins.
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Research context

OpenAlex topics: Bacteriophages and microbial interactions · Monoclonal and Polyclonal Antibodies Research · Glycosylation and Glycoproteins Research

SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.

Affiliations

School of Life Science and Technology Tokyo Institute of Technology Nagatsuta‐cho 4259 Midori‐ku Yokohama 226–8501 Japan

Department of Physics Kyushu University Motooka 744, Nishi‐ku Fukuoka 819‐0395 Japan

Exploratory Research Center on Life and Living Systems (ExCELLS) National Institutes of Natural Sciences Higashiyama 5‐1, Myodaiji Okazaki 444–0864 Japan

Department of Physics Nagoya University Furo‐cho, Chikusa‐ku Nagoya 464–8602 Japan

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