journal article·2023-12-04

Golden Gate Assembly of DNA Nanostructures

Wenyuan Zhang, Hongrui Wu, Wen Wang, Bryan Wei

ACS Materials Letters· Volume 5· Issue 12
Publisher page

Abstract

Golden Gate assembly is a popular molecular cloning method to assemble multiple DNA fragments in a “one-pot” enzymatic reaction. Taking advantage of the high combination efficiency provided by the enzyme cocktail of this assembly method, we present a controllable assembly system of synthetic DNA nanostructures in this work. Similar to the rendering of duplex fragments to be assembled in Golden Gate assembly, type II restriction enzyme creates specific sticky end pairs for the DNA nanostructure units to connect, and ligase consolidates the sticky end cohesion, which collectively enables the corresponding hierarchical assembly. By application of this molecular cloning method in DNA self-assembly, the enzymatic treatment leads to the production of a number of high-order DNA nanostructures.
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Research context

OpenAlex topics: Advanced biosensing and bioanalysis techniques · Bacteriophages and microbial interactions · RNA Interference and Gene Delivery

SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.

Affiliations

School of Life Sciences, Tsinghua University, Beijing 100084, China

Center for Synthetic and Systems Biology, Tsinghua University, Beijing 100084, China

BGI Research, Shenzhen 518083, China

Guangdong Provincial Key Laboratory of Genome Read and Write, BGI Research, Shenzhen 518083, China

Funding

National Key Research and Development Program of China · National Natural Science Foundation of China

References (32)

Show source-provided references
1. 10.1038/350631a010.1038/350631a0 ↗
2. 10.1038/2899810.1038/28998 ↗
3. 10.1021/cr400354z10.1021/cr400354z ↗
4. 10.1038/s41557-019-0251-810.1038/s41557-019-0251-8 ↗
5. 10.1021/jacs.9b0155010.1021/jacs.9b01550 ↗
6. 10.1002/anie.20220836710.1002/anie.202208367 ↗
7. 10.1002/smll.20220762210.1002/smll.202207622 ↗
8. 10.1021/jacs.3c0121410.1021/jacs.3c01214 ↗
9. 10.1021/acsnano.7b0834510.1021/acsnano.7b08345 ↗
10. 10.1002/cbic.20200010610.1002/cbic.202000106 ↗
11. 10.1093/nar/gkaa48810.1093/nar/gkaa488 ↗
12. 10.1002/smll.20220147810.1002/smll.202201478 ↗
13. 10.1038/ncomms1093510.1038/ncomms10935 ↗
14. 10.1002/cbic.20170068210.1002/cbic.201700682 ↗
15. 10.1038/s41467-021-25450-510.1038/s41467-021-25450-5 ↗
16. 10.1021/ja993393e10.1021/ja993393e ↗
17. 10.1021/nl060350510.1021/nl0603505 ↗
18. 10.1021/jacs.9b0661310.1021/jacs.9b06613 ↗
19. 10.1093/nar/gkab61110.1093/nar/gkab611 ↗
20. 10.1093/nar/gkac60610.1093/nar/gkac606 ↗
21. 10.1002/adma.20220044110.1002/adma.202200441 ↗
22. 10.1371/journal.pone.000364710.1371/journal.pone.0003647 ↗
23. 10.1038/nmeth.131810.1038/nmeth.1318 ↗
24. 10.1016/0022-5193(82)90002-910.1016/0022-5193(82)90002-9 ↗
25. 10.1038/nature0140610.1038/nature01406 ↗
26. 10.1038/natrevmats.2017.6810.1038/natrevmats.2017.68 ↗
27. 10.1038/s43586-020-00009-810.1038/s43586-020-00009-8 ↗
28. 10.1038/nature0458610.1038/nature04586 ↗
29. 10.1038/nature2465510.1038/nature24655 ↗
30. 10.1002/marc.20210008410.1002/marc.202100084 ↗
31. 10.3390/nano608013910.3390/nano6080139 ↗
32. 10.1007/s00253-022-12315-010.1007/s00253-022-12315-0 ↗