A systematic comparison of Kapton-based HARE chips for fixed-target serial crystallography
Source abstract
Abstract
Fixed targets are a versatile sample delivery method for serial crystallography experiments and a favorable choice regarding sample efficiency. The hit-and-return (HARE) chips utilize pyramidal-shaped features to pre-position crystals in a regular pattern. Typically, these micron-sized features are chemically etched into single-crystal silicon wafers providing a rigid sample mount with minimal background. As polymer chips are emerging as an alternative, here we report the production of HARE chips identical to silicon with pyramidal-shaped features and micron accuracy by laser ablating Kapton foils. We systematically compare the serial crystallography experiments of five different proteins using both Kapton and silicon HARE chips. Comparing these 15 structures, Kapton HARE chips yield data quality that is comparable to the silicon chips. Therefore, we propose that Kapton is a viable and cost-effective alternative support material.
Source: openalex_inverted_index · Quality: baseline
Research context
OpenAlex topics: Enzyme Structure and Function · Crystallization and Solubility Studies · X-ray Diffraction in Crystallography
SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.
References (51)
Show source-provided references
1. Serial synchrotron crystallography for time-resolved structural biology10.1016/j.sbi.2020.06.019 ↗
2. Serial femtosecond crystallography10.1038/s43586-022-00141-7 ↗
3. Femtosecond X-ray protein nanocrystallography10.1038/nature09750 ↗
4. Room-temperature macromolecular serial crystallography using synchrotron radiation10.1107/S2052252514010070 ↗
5. X-ray free-electron lasers for the structure and dynamics of macromolecules10.1146/annurev-biochem-013118-110744 ↗
6. Resolving polymorphs and radiation-driven effects in microcrystals using fixed-target serial synchrotron crystallography10.1107/S2059798318010240 ↗
7. Serial femtosecond and serial synchrotron crystallography can yield data of equivalent quality: A systematic comparison10.1126/sciadv.abf1380 ↗
8. An environmental control box for serial crystallography enables multi-dimensional experiments
9. Proton uptake mechanism in bacteriorhodopsin captured by serial synchrotron crystallography10.1126/science.aaw8634 ↗
10. Time-resolved crystallography reveals allosteric communication aligned with molecular breathing10.1126/science.aaw9904 ↗
11. Best practices for time-resolved serial synchrotron crystallography10.1107/S2059798321011621 ↗
12. Injector for scattering measurements on fully solvated biospecies10.1063/1.3693040 ↗
13. An on-demand, drop-on-drop method for studying enzyme catalysis by serial crystallography10.1038/s41467-021-24757-7 ↗
14. Strategies for sample delivery for femtosecond crystallography10.1107/S2059798318017953 ↗
15. The hit-and-return system enables efficient time-resolved serial synchrotron crystallography10.1038/s41592-018-0180-2 ↗
16. Liquid application method for time-resolved analyses by serial synchrotron crystallography10.1038/s41592-019-0553-1 ↗
17. Serial crystallography on in vivo grown microcrystals using synchrotron radiation10.1107/S2052252513033939 ↗
18. Determination of damage-free crystal structure of an X-ray–sensitive protein using an XFEL10.1038/nmeth.2962 ↗
19. Crystallography on a chip – without the chip: Sheet-on-sheet sandwich10.1107/S2059798318011634 ↗
20. Room-temperature macromolecular crystallography using a micro-patterned silicon chip with minimal background scattering10.1107/S1600576716006348 ↗
21. A micro-patterned silicon chip as sample holder for macromolecular crystallography experiments with minimal background scattering10.1038/srep10451 ↗
22. Fixed target combined with spectral mapping: Approaching 100% hit rates for serial crystallography10.1107/S2059798316010834 ↗
23. Fixed target matrix for femtosecond time-resolved and in situ serial micro-crystallography10.1063/1.4928706 ↗
24. A modular and compact portable mini-endstation for high-precision, high-speed fixed target serial crystallography at FEL and synchrotron sources10.1107/S1600577515016938 ↗
25. High-speed fixed-target serial virus crystallography10.1038/nmeth.4335 ↗
26. The HARE chip for efficient time-resolved serial synchrotron crystallography10.1107/S1600577520000685 ↗
27. Nylon mesh-based sample holder for fixed-target serial femtosecond crystallography10.1038/s41598-019-43485-z ↗
28. Crystallography on a chip10.1107/S0907444911055296 ↗
29. Micro-structured polymer fixed targets for serial crystallography at synchrotrons and xfels10.1107/S2052252523007595 ↗
30. Dose-resolved serial synchrotron and XFEL structures of radiation-sensitive metalloproteins10.1107/S2052252519003956 ↗
31. The moderately efficient enzyme: evolutionary and physicochemical trends shaping enzyme parameters10.1021/bi2002289 ↗
32. Sub-micrometer structuring of surfaces with deep UV lasers
33. Mapping enzyme landscapes by time-resolved crystallography with synchrotron and x-ray free electron laser light10.1146/annurev-biophys-100421-110959 ↗
34. Applications of thin-film sandwich crystallization platforms10.1107/S2053230X16004386 ↗
35. A Versatile System for High-Throughput In Situ X-ray Screening and Data Collection of Soluble and Membrane-Protein Crystals10.1021/acs.cgd.6b00950 ↗
36. Plug-and-play polymer microfluidic chips for hydrated, room temperature, fixed-target serial crystallography10.1039/D1LC00810B ↗
37. Integrated sample-handling and mounting system for fixed-target serial synchrotron crystallography10.1107/S2059798321001868 ↗
38. Fixed-target time-resolved crystallography at xfels: the scourge of light contamination but reduced sample consumption
39. Sample manipulation and data assembly for robust microcrystal synchrotron crystallography10.1107/S2052252518005389 ↗
40. Megahertz serial crystallography10.1038/s41467-018-06156-7 ↗
41. Millisecond cryo-trapping by the spitrobot crystal plunger simplifies time-resolved crystallography10.1038/s41467-023-37834-w ↗
42. Light-regulation of tryptophan synthase by combining protein design and enzymology10.3390/ijms20205106 ↗
43. MeshAndCollect: An automated multi-crystal data-collection workflow for synchrotron macromolecular crystallography beamlines10.1107/S1399004715017927 ↗
44. Arvai · 2012
45. Crystfel: a software suite for snapshot serial crystallography10.1107/S0021889812002312 ↗
46. Phaser crystallographic software10.1107/S0021889807021206 ↗
47. Recent developments in the phenix software for automated crystallographic structure determination10.1107/S0909049503024130 ↗
48. Polder maps: improving omit maps by excluding bulk solvent10.1107/S2059798316018210 ↗
49. Coot: model-building tools for molecular graphics10.1107/S0907444904019158 ↗
50. Features and development of coot10.1107/S0907444910007493 ↗
51. Schrodinger · 2015