journal article·2020-02-28

Few-Layer Black Phosphorus as an Artificial Substrate for DNA Replication

Jie Gui, Yunfei Bai, Huizhen Li, Jian Peng, Yufan Huang, Liping Sun, Jian Weng

ACS Applied Nano Materials· Volume 3· Issue 2
Publisher page

Abstract

DNA replication is the basis for biological inheritance in nature. The plasma membrane of prokaryotic bacteria might provide a supporting surface for the attachment of either polymerase or DNA during in vivo DNA replication. In order to understand that fixing DNA or polymerase on the membrane is important for highly efficient DNA replication, we develop a system to mimic prokaryotic DNA replication. We introduce a two-dimensional nanomaterial, few-layer black phosphorus (BP), which shares some similar properties with bacteria plasma membrane in dimension, surface group, surface charge, hydrophilicity, and thickness. Either polymerase or DNA primer is immobilized on a BP surface to initiate in vitro DNA replication. The results show that BP could promote DNA replication with high efficiency in both cases. The DNA yield is increased to more than 6 times and nonspecific products are reduced significantly. This discovery might deepen our understanding about the role of immobilization of the replication component on the membrane and application of BP as an artificial substrate for DNA replication.
Source: openalex_inverted_index · Quality: baseline

Research context

OpenAlex topics: Advanced biosensing and bioanalysis techniques · RNA Interference and Gene Delivery · Nanopore and Nanochannel Transport Studies

SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.

Affiliations

Key Laboratory of Biomedical Engineering of Fujian Province, Department of Biomaterials, College of Materials, Xiamen University, Xiamen 361005, P. R. China

Department of Breast Surgery, The First Affiliated Hospital of Xiamen University, Xiamen 361003, P. R. China

Funding

National Natural Science Foundation of China

References (40)

Show source-provided references
1. 10.1002/smll.20160003210.1002/smll.201600032 ↗
2. 10.1073/pnas.171442111510.1073/pnas.1714421115 ↗
3. 10.1039/C8CS00823J10.1039/C8CS00823J ↗
4. 10.1016/j.nantod.2019.02.01210.1016/j.nantod.2019.02.012 ↗
5. 10.1002/adfm.20180830610.1002/adfm.201808306 ↗
6. 10.1021/acsami.6b1611110.1021/acsami.6b16111 ↗
7. 10.1103/PhysRevB.92.12541210.1103/PhysRevB.92.125412 ↗
8. 10.1039/C7NR00663B10.1039/C7NR00663B ↗
9. 10.1002/adma.20170381110.1002/adma.201703811 ↗
10. Alberts B. · 2015
11. 10.1083/jcb.20180901210.1083/jcb.201809012 ↗
12. Kornberg A. · 2005
13. 10.1016/0092-8674(88)90186-910.1016/0092-8674(88)90186-9 ↗
14. 10.1002/jcb.2061010.1002/jcb.20610 ↗
15. 10.1016/0092-8674(80)90527-910.1016/0092-8674(80)90527-9 ↗
16. 10.1038/nrmicro164010.1038/nrmicro1640 ↗
17. 10.3390/ijms1404851710.3390/ijms14048517 ↗
18. 10.1146/annurev.mi.43.100189.00051310.1146/annurev.mi.43.100189.000513 ↗
19. 10.1007/s00253-016-7468-x10.1007/s00253-016-7468-x ↗
20. 10.1101/gad.91330110.1101/gad.913301 ↗
21. 10.1126/science.284.5421.179010.1126/science.284.5421.1790 ↗
22. 10.1021/acs.biochem.8b0114710.1021/acs.biochem.8b01147 ↗
23. 10.1126/science.282.5393.151610.1126/science.282.5393.1516 ↗
24. 10.1002/adma.20160327610.1002/adma.201603276 ↗
25. 10.1039/C6RA21296D10.1039/C6RA21296D ↗
26. 10.1038/nrm233010.1038/nrm2330 ↗
27. Garrett R. H. · 2015
28. 10.1126/science.113137010.1126/science.1131370 ↗
29. 10.1002/wfs2.133510.1002/wfs2.1335 ↗
30. 10.1038/244418a010.1038/244418a0 ↗
31. Green M. R. · 2012
32. 10.1016/j.molliq.2019.11100110.1016/j.molliq.2019.111001 ↗
33. 10.1007/s10895-012-1059-810.1007/s10895-012-1059-8 ↗
34. Jeffrey G. A. · 2012
35. 10.1093/protein/gzz03710.1093/protein/gzz037 ↗
36. 10.1038/nnano.2011.14110.1038/nnano.2011.141 ↗
37. 10.1002/smll.20120013910.1002/smll.201200139 ↗
38. 10.1002/anie.20050040310.1002/anie.200500403 ↗
39. 10.1002/smll.20160289610.1002/smll.201602896 ↗
40. 10.1039/C8RA00560E10.1039/C8RA00560E ↗